Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29347260

Identifier: 29347260

GI number: 29347260

Start: 2322206

End: 2323294

Strand: Reverse

Name: 29347260

Synonym: BT_1850

Alternate gene names: NA

Gene position: 2323294-2322206 (Counterclockwise)

Preceding gene: 29347261

Following gene: 29347257

Centisome position: 37.11

GC content: 43.71

Gene sequence:

>1089_bases
ATGAAACGTATTGTTTTTTTAGATTACGTGCGCGTGTTCGCATGTTTCCTCGTTATGGTGGTACACGCCAGTGAAAACTT
TTATGGTGCTGCCGGATCTACGGACATGGCGGGACCGCAATCTTTTTTAGCCAGTGAAGCAGACCGATTGTGGGTGGCCG
TGTACGATGGTTTTTCACGCATGGCAGTACCATTGTTTATGATTGTCTCTGCTTATCTGCTGGTACCGATGAAGGAGGGA
CAGACTTCATGGCAGTTCTACCGCCGACGCTTCACTCATATCCTGCCACCGTTTTTTATATTTATGATACTCTATAGTAT
CCTGCCGATGTTGTGGGGACAGATAGACAGCGAGACATCAATAAAGGATATGTCTCGAATATTCCTGAACTTCCCGACGC
TTGCCGGACACCTTTGGTTCATGTATCCCCTGATAAGTCTTTACCTGTTTATACCTATTATATCTCCTTGGTTGAGTAAA
GCCACTGCAAAAGAAGAACGTTTCTTCATAGGACTGTTCCTGTTATCAACGTGTATGCCGTACTTCAATCGCTGGTTTGG
TGAAGTGTGGGGGCAGTGTTTTTGGAACGAATACCATATGTTGTGGTATTTCTCAGGCTATCTTGGATATCTTGTGTTGG
CACACTACATACGTGTACACTTAAAATGGGATCGTTCCAAACGTTTCATTGTAGGACTCATTTCAATGGTTGCCGGGGCT
GCGCTGACTATTTACTCATTCTATATACAGGCTATTCCCGGAATTACTCATTCTACCCCTGTCATAGAAATAGGATGGGC
TTTCTGTACGATTAACTGTGTACTTCTTACAGCGGGTACATTCCTTCTCTTCACTTGTATAAATCGGCCGGAAGCTCCGC
GTTTCGTAACAGATATGTCGAAACTTAGCTATGGTATGTACCTTATGCATATATTCTGGCTCGGGTTATGGGCGACAGTA
TTCAAAAATACGCTGGAACTGCCTACTGTTTCCGCCATCCCATGTATTGCAGTGACTACATTTGTCTGCTGTTATATAAC
GACAAAGATTATCTCATTCATACCGGGCAGTAAATGGATTATAGGCTAA

Upstream 100 bases:

>100_bases
GCTGGGCATACCTCCTGCTGATTTGCACGAGCAGCTGAAACAATGTAAATAAAAGACAAAACTAAAAACATATTACTACT
AATTAATACCCAAACAGAAA

Downstream 100 bases:

>100_bases
ATAGATCGGATGTTCTTGAATTAAACAAAAAAGGGAAGCGATTGCTTCCCTTTTTTGTTTACTCATCTTATTATATGGTC
CTTCCTGGTTACGCTTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG
QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK
ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA
ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV
FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG

Sequences:

>Translated_362_residues
MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG
QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK
ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA
ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV
FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG
>Mature_362_residues
MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG
QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK
ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA
ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV
FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG

Specific function: Unknown

COG id: COG3274

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41849; Mature: 41849

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSR
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHH
MAVPLFMIVSAYLLVPMKEGQTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH
IKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSKATAKEERFFIGLFLLSTCMP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMS
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KLSYGMYLMHIFWLGLWATVFKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IG
CC
>Mature Secondary Structure
MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSR
CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHH
MAVPLFMIVSAYLLVPMKEGQTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH
IKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSKATAKEERFFIGLFLLSTCMP
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMS
HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
KLSYGMYLMHIFWLGLWATVFKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
IG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA