| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347260
Identifier: 29347260
GI number: 29347260
Start: 2322206
End: 2323294
Strand: Reverse
Name: 29347260
Synonym: BT_1850
Alternate gene names: NA
Gene position: 2323294-2322206 (Counterclockwise)
Preceding gene: 29347261
Following gene: 29347257
Centisome position: 37.11
GC content: 43.71
Gene sequence:
>1089_bases ATGAAACGTATTGTTTTTTTAGATTACGTGCGCGTGTTCGCATGTTTCCTCGTTATGGTGGTACACGCCAGTGAAAACTT TTATGGTGCTGCCGGATCTACGGACATGGCGGGACCGCAATCTTTTTTAGCCAGTGAAGCAGACCGATTGTGGGTGGCCG TGTACGATGGTTTTTCACGCATGGCAGTACCATTGTTTATGATTGTCTCTGCTTATCTGCTGGTACCGATGAAGGAGGGA CAGACTTCATGGCAGTTCTACCGCCGACGCTTCACTCATATCCTGCCACCGTTTTTTATATTTATGATACTCTATAGTAT CCTGCCGATGTTGTGGGGACAGATAGACAGCGAGACATCAATAAAGGATATGTCTCGAATATTCCTGAACTTCCCGACGC TTGCCGGACACCTTTGGTTCATGTATCCCCTGATAAGTCTTTACCTGTTTATACCTATTATATCTCCTTGGTTGAGTAAA GCCACTGCAAAAGAAGAACGTTTCTTCATAGGACTGTTCCTGTTATCAACGTGTATGCCGTACTTCAATCGCTGGTTTGG TGAAGTGTGGGGGCAGTGTTTTTGGAACGAATACCATATGTTGTGGTATTTCTCAGGCTATCTTGGATATCTTGTGTTGG CACACTACATACGTGTACACTTAAAATGGGATCGTTCCAAACGTTTCATTGTAGGACTCATTTCAATGGTTGCCGGGGCT GCGCTGACTATTTACTCATTCTATATACAGGCTATTCCCGGAATTACTCATTCTACCCCTGTCATAGAAATAGGATGGGC TTTCTGTACGATTAACTGTGTACTTCTTACAGCGGGTACATTCCTTCTCTTCACTTGTATAAATCGGCCGGAAGCTCCGC GTTTCGTAACAGATATGTCGAAACTTAGCTATGGTATGTACCTTATGCATATATTCTGGCTCGGGTTATGGGCGACAGTA TTCAAAAATACGCTGGAACTGCCTACTGTTTCCGCCATCCCATGTATTGCAGTGACTACATTTGTCTGCTGTTATATAAC GACAAAGATTATCTCATTCATACCGGGCAGTAAATGGATTATAGGCTAA
Upstream 100 bases:
>100_bases GCTGGGCATACCTCCTGCTGATTTGCACGAGCAGCTGAAACAATGTAAATAAAAGACAAAACTAAAAACATATTACTACT AATTAATACCCAAACAGAAA
Downstream 100 bases:
>100_bases ATAGATCGGATGTTCTTGAATTAAACAAAAAAGGGAAGCGATTGCTTCCCTTTTTTGTTTACTCATCTTATTATATGGTC CTTCCTGGTTACGCTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG
Sequences:
>Translated_362_residues MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG >Mature_362_residues MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSRMAVPLFMIVSAYLLVPMKEG QTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETSIKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSK ATAKEERFFIGLFLLSTCMPYFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMSKLSYGMYLMHIFWLGLWATV FKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWIIG
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41849; Mature: 41849
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSR CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHH MAVPLFMIVSAYLLVPMKEGQTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH IKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSKATAKEERFFIGLFLLSTCMP HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMS HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KLSYGMYLMHIFWLGLWATVFKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IG CC >Mature Secondary Structure MKRIVFLDYVRVFACFLVMVVHASENFYGAAGSTDMAGPQSFLASEADRLWVAVYDGFSR CCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHH MAVPLFMIVSAYLLVPMKEGQTSWQFYRRRFTHILPPFFIFMILYSILPMLWGQIDSETS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH IKDMSRIFLNFPTLAGHLWFMYPLISLYLFIPIISPWLSKATAKEERFFIGLFLLSTCMP HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFNRWFGEVWGQCFWNEYHMLWYFSGYLGYLVLAHYIRVHLKWDRSKRFIVGLISMVAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH ALTIYSFYIQAIPGITHSTPVIEIGWAFCTINCVLLTAGTFLLFTCINRPEAPRFVTDMS HHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KLSYGMYLMHIFWLGLWATVFKNTLELPTVSAIPCIAVTTFVCCYITTKIISFIPGSKWI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA