Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29347238

Identifier: 29347238

GI number: 29347238

Start: 2292185

End: 2293747

Strand: Reverse

Name: 29347238

Synonym: BT_1828

Alternate gene names: NA

Gene position: 2293747-2292185 (Counterclockwise)

Preceding gene: 29347239

Following gene: 29347237

Centisome position: 36.64

GC content: 36.6

Gene sequence:

>1563_bases
ATGAGTAGTAAAATTTATCCTATCGGTATACAGAACTTTGAAAAGATTCGAAAAGATGGTTACTTTTACATTGATAAAAC
TGCGTTGATTTATAAATTGGTAAAGACTGGCAGTTATTATTTTCTAAGTCGTCCCCGTCGTTTTGGAAAAAGTTTGCTGT
TATCTACTCTTGAAGCTTATTTTAAAGGAAGAAAAGAACTTTTCGAAGGATTGGCGATGGAGAGTCTGGAGAAGGACTGG
ATTGAATATCCGGTTATTCATTTGGATCTGAATGCTAAAAAGTTTGATACTGAAAATGACCTTATCCGTCTGATAGATCG
ACAACTTCTTGTTTACGAAGCTCAATACGGTTCATGTTCCAGTGATGAAACGATCGATGACCGTTTGGTTACTTTAATTA
GACTGGCCGCAGAAAAAACAGGGCAGCGGGTGGTGATTCTTGTCGACGAGTATGACAAACCGATGTTGCAAGCCATTGGT
AGAGATGAGTTGCAGGAAGAATACCGGAATACATTGAAAGCCTTCTACGGTGTGATGAAGTCGATGGATGGCTATATTAA
ATTTGCCATGCTGACAGGTGTAACGAAGTTTGGTAAGGTTAGTGTATTCAGCGATTTGAATAATCTCAACGATATCTCCA
TGTGGAATCAATATATAGATATATGTGGAGTCAGTGATCAAGAATTGCATGATAATCTGGAGGTTGAACTTTCTGAATTT
GCAGATGCTCGTGGAATGGCATATAATGAAATATGTGTTGCATTGCGTGAATACTATGATGGTTACCATTTTACTCATAA
TTCCATTGGCATGTATAATCCGTTTAGTCTTCTCAATGCATTCTTACGTAATGAATTTGGCAGCTATTGGTTCGAAACCG
GTACACCTACCTATCTAGTAGAATTATTAAAAAAACATCATTATGATCTTCAGAGAATGGCGCACGAAGAAACGAGTGCT
GAAGTCTTGAATAGTGTTGATTCTACTTCCGACAATCCGATACCTGTCATTTATCAGAGTGGTTATCTCACTATAAAAGG
ATATGATGAGCGTTTTGGTATTTATCGTCTTGGATTTCCTAACCGTGAAGTAGAAGAAGGGTTTGTTAAATTCTTGCTTC
CTTTCTATGCTAATACTAATGCAGTGGAATCTTCTTTTGAAATTCAGAAATTTGTTCGTGAGATAGAAGCCGGAGATTAT
GATTCTTTCTTTCGACGTTTACAAAGTTTCTTTGCTGATACACCTTATGAGTTGATTCGTGATTTGGAATTACATTATCA
AAATGTTCTTTTTATTGTTTTCAAGTTAATCGGATTCTATGTTAAAGCAGAATATCATACTAGTGAAGGACGTATTGATC
TTGTTCTCCAGACAGATAAATTCGTTTATATCATGGAGTTTAAATTGGATGGTACAGCGGAGGAAGCATTGCTACAGATA
AATGAGAAACATTACGCTCAGCCTTTCGAATCCAATGATTGGGAGTTGTTCAAAATTGGAGTGAATTTCAGTGCCAAGAC
ACGAAATATAGAGAAATGGGTTGTAGAAAAAGGAGGAAACTAA

Upstream 100 bases:

>100_bases
TTTTGCGCAGCTTTGTGATAGAAACTTTTGTGTGTAACTTGGCGTTATTTGTTTGGAAAGAAGTATCTTTGTGTATTGCA
AATCAAAAATCCCTGAGAAT

Downstream 100 bases:

>100_bases
GTATTTAAAATTAGTTGGTAAAGTCTTTCTGCCATTTAGCTTCGTTTATAATATTCTTCGCTTTCATAAAGCAATGCTTT
GGATATCCAAAAGCTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSSKIYPIGIQNFEKIRKDGYFYIDKTALIYKLVKTGSYYFLSRPRRFGKSLLLSTLEAYFKGRKELFEGLAMESLEKDW
IEYPVIHLDLNAKKFDTENDLIRLIDRQLLVYEAQYGSCSSDETIDDRLVTLIRLAAEKTGQRVVILVDEYDKPMLQAIG
RDELQEEYRNTLKAFYGVMKSMDGYIKFAMLTGVTKFGKVSVFSDLNNLNDISMWNQYIDICGVSDQELHDNLEVELSEF
ADARGMAYNEICVALREYYDGYHFTHNSIGMYNPFSLLNAFLRNEFGSYWFETGTPTYLVELLKKHHYDLQRMAHEETSA
EVLNSVDSTSDNPIPVIYQSGYLTIKGYDERFGIYRLGFPNREVEEGFVKFLLPFYANTNAVESSFEIQKFVREIEAGDY
DSFFRRLQSFFADTPYELIRDLELHYQNVLFIVFKLIGFYVKAEYHTSEGRIDLVLQTDKFVYIMEFKLDGTAEEALLQI
NEKHYAQPFESNDWELFKIGVNFSAKTRNIEKWVVEKGGN

Sequences:

>Translated_520_residues
MSSKIYPIGIQNFEKIRKDGYFYIDKTALIYKLVKTGSYYFLSRPRRFGKSLLLSTLEAYFKGRKELFEGLAMESLEKDW
IEYPVIHLDLNAKKFDTENDLIRLIDRQLLVYEAQYGSCSSDETIDDRLVTLIRLAAEKTGQRVVILVDEYDKPMLQAIG
RDELQEEYRNTLKAFYGVMKSMDGYIKFAMLTGVTKFGKVSVFSDLNNLNDISMWNQYIDICGVSDQELHDNLEVELSEF
ADARGMAYNEICVALREYYDGYHFTHNSIGMYNPFSLLNAFLRNEFGSYWFETGTPTYLVELLKKHHYDLQRMAHEETSA
EVLNSVDSTSDNPIPVIYQSGYLTIKGYDERFGIYRLGFPNREVEEGFVKFLLPFYANTNAVESSFEIQKFVREIEAGDY
DSFFRRLQSFFADTPYELIRDLELHYQNVLFIVFKLIGFYVKAEYHTSEGRIDLVLQTDKFVYIMEFKLDGTAEEALLQI
NEKHYAQPFESNDWELFKIGVNFSAKTRNIEKWVVEKGGN
>Mature_519_residues
SSKIYPIGIQNFEKIRKDGYFYIDKTALIYKLVKTGSYYFLSRPRRFGKSLLLSTLEAYFKGRKELFEGLAMESLEKDWI
EYPVIHLDLNAKKFDTENDLIRLIDRQLLVYEAQYGSCSSDETIDDRLVTLIRLAAEKTGQRVVILVDEYDKPMLQAIGR
DELQEEYRNTLKAFYGVMKSMDGYIKFAMLTGVTKFGKVSVFSDLNNLNDISMWNQYIDICGVSDQELHDNLEVELSEFA
DARGMAYNEICVALREYYDGYHFTHNSIGMYNPFSLLNAFLRNEFGSYWFETGTPTYLVELLKKHHYDLQRMAHEETSAE
VLNSVDSTSDNPIPVIYQSGYLTIKGYDERFGIYRLGFPNREVEEGFVKFLLPFYANTNAVESSFEIQKFVREIEAGDYD
SFFRRLQSFFADTPYELIRDLELHYQNVLFIVFKLIGFYVKAEYHTSEGRIDLVLQTDKFVYIMEFKLDGTAEEALLQIN
EKHYAQPFESNDWELFKIGVNFSAKTRNIEKWVVEKGGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018631
- InterPro:   IPR012547 [H]

Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]

EC number: NA

Molecular weight: Translated: 60726; Mature: 60594

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKIYPIGIQNFEKIRKDGYFYIDKTALIYKLVKTGSYYFLSRPRRFGKSLLLSTLEAY
CCCCEEECCCHHHHHHHHCCCEEEEHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH
FKGRKELFEGLAMESLEKDWIEYPVIHLDLNAKKFDTENDLIRLIDRQLLVYEAQYGSCS
HCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
SDETIDDRLVTLIRLAAEKTGQRVVILVDEYDKPMLQAIGRDELQEEYRNTLKAFYGVMK
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
SMDGYIKFAMLTGVTKFGKVSVFSDLNNLNDISMWNQYIDICGVSDQELHDNLEVELSEF
HCCHHHHHHHHHCCHHCCCEEHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEHHHH
ADARGMAYNEICVALREYYDGYHFTHNSIGMYNPFSLLNAFLRNEFGSYWFETGTPTYLV
HHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHH
ELLKKHHYDLQRMAHEETSAEVLNSVDSTSDNPIPVIYQSGYLTIKGYDERFGIYRLGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCEEEECCC
NREVEEGFVKFLLPFYANTNAVESSFEIQKFVREIEAGDYDSFFRRLQSFFADTPYELIR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
DLELHYQNVLFIVFKLIGFYVKAEYHTSEGRIDLVLQTDKFVYIMEFKLDGTAEEALLQI
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCEEEEEEEEECCCHHHHHHHH
NEKHYAQPFESNDWELFKIGVNFSAKTRNIEKWVVEKGGN
HHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SSKIYPIGIQNFEKIRKDGYFYIDKTALIYKLVKTGSYYFLSRPRRFGKSLLLSTLEAY
CCCEEECCCHHHHHHHHCCCEEEEHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHH
FKGRKELFEGLAMESLEKDWIEYPVIHLDLNAKKFDTENDLIRLIDRQLLVYEAQYGSCS
HCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEECCCCCC
SDETIDDRLVTLIRLAAEKTGQRVVILVDEYDKPMLQAIGRDELQEEYRNTLKAFYGVMK
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
SMDGYIKFAMLTGVTKFGKVSVFSDLNNLNDISMWNQYIDICGVSDQELHDNLEVELSEF
HCCHHHHHHHHHCCHHCCCEEHHHHCCCCCHHHHHHHHHHHCCCCHHHHHCCCCEEHHHH
ADARGMAYNEICVALREYYDGYHFTHNSIGMYNPFSLLNAFLRNEFGSYWFETGTPTYLV
HHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHH
ELLKKHHYDLQRMAHEETSAEVLNSVDSTSDNPIPVIYQSGYLTIKGYDERFGIYRLGFP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCCCCEEEECCC
NREVEEGFVKFLLPFYANTNAVESSFEIQKFVREIEAGDYDSFFRRLQSFFADTPYELIR
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
DLELHYQNVLFIVFKLIGFYVKAEYHTSEGRIDLVLQTDKFVYIMEFKLDGTAEEALLQI
HHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCEEEEEEEEECCCHHHHHHHH
NEKHYAQPFESNDWELFKIGVNFSAKTRNIEKWVVEKGGN
HHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2388847 [H]