| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is eptA [H]
Identifier: 29347223
GI number: 29347223
Start: 2274992
End: 2276695
Strand: Reverse
Name: eptA [H]
Synonym: BT_1813
Alternate gene names: 29347223
Gene position: 2276695-2274992 (Counterclockwise)
Preceding gene: 29347224
Following gene: 29347222
Centisome position: 36.37
GC content: 45.13
Gene sequence:
>1704_bases ATGAAGCTTTTTAAGAACATAAAGAAATGGTTTGAAAATCAGGAACACTTGTTTTACCTGTTCCTGATCATCCTGATAAT GCCCAACATCGTTCTGGGTTTCACAGAACCCTTACCGTTGATGGCGAAGGTAAGCAATGTCTTGTTGCCTTTAGCCTGTT ACTATCTGCTGATGACTTTGTCCCGCAACTGTGGCAAGATGCTATGGATTTTGTTCATCTTCCTGTTTTTCGGCGCCTTT CAGATTGTGCTGCTTTATCTGTTCGGACAGTCCATCATCGCTGTAGATATGTTTCTAAATCTGGTAACCACCAATTCGAG TGAAGCGATGGAGTTGCTGGACAACTTATTGCCGGCCATAGTCACCGTAGTCATACTTTACATTCCTGCCCTGATATTGG GCATGATTTCAATTATCCGCAAGCGCCGGCTTTCTGTGGCATTTATTCGCAGAGAACGGAAGAGAGCGTTCATCCTGCTT GGAATCTCTCTTCTCGCCCTGGGCGGAGCTTACTGGGAAGACTCCCGCTATGAACTGAAATCCGATCTTTATCCTCTCAA TGTATGCTATAATGTGGGACTTGCTTTTCAACGGACGGCATTGACGCAAAATTACCATCATACCTCGAAAGATTTTACTT TCCATGCCCAAGCCACTCATCCGGTGGACAAGCGTGAAGTGTATGTAATGGTAGTGGGAGAGACTTCCCGCGCATTGAAC TGGCAACTCTACGGATATGAGCGGGAGACGAATCCGCTTCTGTCCCGTCAACCGGGAATTGTTGCTTTCTCCAAAGTCCT GACGGAGTCGAATACCACCCATAAAAGCGTACCCATGCTGATGTCCGATATTACAGCCTGTAACTTCGACTCCATTTACC ATCAAAAAGGAATCATCACGGCCTTTAAGGAGGCAGGTTATCAGACAGCCTTTTTCTCCAACCAGCGCTATAATCATTCC TTTATCGATTTCTTCGGAAAGGAAGCCGATACATTCGATTTTATAAAAGAAGATTCGCTGGATTCCGCCTACAATCCTTC TGATGATGAACTGCTGGCATTAGTAGCGAAAGAATTATCCAAGGGAAATCAGAAACAGTTTATCGTACTTCACACATACG GCTCACATTTCAATTATCGTGAACGTTATCCGTCGGAAGACGCTTTCTTTCTGCCCGATTATCCGGTAGAAGCGGAAGTG AAGTACCGTGATAACCTGGTGAATGCTTACGATAACACCATCCGCTATACAGATAGCTTTCTGTCACGTCTGATTCATAT GCTCGAAGAACAGCATGTGGATGCTGCAATGCTCTACACCTCCGATCATGGAGAGGATATTTTTGACGATTCCCGTCATC TGTTCCTTCATGCTTCTCCGGTTCCTTCTTACTATCAGCTTCATGTTCCGTTTCTGATATGGATGTCCGACACCTATCGG GAAGCTTATCCCGAACATTGGCAAACCGTGACCAAGAATAAGGATAAGGACCTATCTTCCAGCCGTTCATTCTTTCCTAC CATGCTGGAACTGGGGGGAGTGCAAACTTCTTACCGCAACGATTCCTCATCTGTAGTCAGCCCTCTTTACACCATGAAGC CGAGAGTATATCTGAATGATCATAACGAACCACGCCCCTTGGATGATCTGGGAATGAAACAGCCTGACTTCCAGAAATGT CAAGTATTAGGTATTAAGTATTAG
Upstream 100 bases:
>100_bases AATTATGGTTTCGGCTATCGCTGGGAATTTAAGAAGAGAGTAAATGTACGTTTGGATTTAGGGTTTGGCAAGCACCAGAC CGGATTTATATTTAATATCA
Downstream 100 bases:
>100_bases GTAATAGGTAATAAGTAATAGGTAATAAGTAATACACCGTAGCCGTACAGGCAAGGCTATACGAAGCTACGATTATTACC TATTACTTATTACCTATTAC
Product: putative integral membrane protein
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MKLFKNIKKWFENQEHLFYLFLIILIMPNIVLGFTEPLPLMAKVSNVLLPLACYYLLMTLSRNCGKMLWILFIFLFFGAF QIVLLYLFGQSIIAVDMFLNLVTTNSSEAMELLDNLLPAIVTVVILYIPALILGMISIIRKRRLSVAFIRRERKRAFILL GISLLALGGAYWEDSRYELKSDLYPLNVCYNVGLAFQRTALTQNYHHTSKDFTFHAQATHPVDKREVYVMVVGETSRALN WQLYGYERETNPLLSRQPGIVAFSKVLTESNTTHKSVPMLMSDITACNFDSIYHQKGIITAFKEAGYQTAFFSNQRYNHS FIDFFGKEADTFDFIKEDSLDSAYNPSDDELLALVAKELSKGNQKQFIVLHTYGSHFNYRERYPSEDAFFLPDYPVEAEV KYRDNLVNAYDNTIRYTDSFLSRLIHMLEEQHVDAAMLYTSDHGEDIFDDSRHLFLHASPVPSYYQLHVPFLIWMSDTYR EAYPEHWQTVTKNKDKDLSSSRSFFPTMLELGGVQTSYRNDSSSVVSPLYTMKPRVYLNDHNEPRPLDDLGMKQPDFQKC QVLGIKY
Sequences:
>Translated_567_residues MKLFKNIKKWFENQEHLFYLFLIILIMPNIVLGFTEPLPLMAKVSNVLLPLACYYLLMTLSRNCGKMLWILFIFLFFGAF QIVLLYLFGQSIIAVDMFLNLVTTNSSEAMELLDNLLPAIVTVVILYIPALILGMISIIRKRRLSVAFIRRERKRAFILL GISLLALGGAYWEDSRYELKSDLYPLNVCYNVGLAFQRTALTQNYHHTSKDFTFHAQATHPVDKREVYVMVVGETSRALN WQLYGYERETNPLLSRQPGIVAFSKVLTESNTTHKSVPMLMSDITACNFDSIYHQKGIITAFKEAGYQTAFFSNQRYNHS FIDFFGKEADTFDFIKEDSLDSAYNPSDDELLALVAKELSKGNQKQFIVLHTYGSHFNYRERYPSEDAFFLPDYPVEAEV KYRDNLVNAYDNTIRYTDSFLSRLIHMLEEQHVDAAMLYTSDHGEDIFDDSRHLFLHASPVPSYYQLHVPFLIWMSDTYR EAYPEHWQTVTKNKDKDLSSSRSFFPTMLELGGVQTSYRNDSSSVVSPLYTMKPRVYLNDHNEPRPLDDLGMKQPDFQKC QVLGIKY >Mature_567_residues MKLFKNIKKWFENQEHLFYLFLIILIMPNIVLGFTEPLPLMAKVSNVLLPLACYYLLMTLSRNCGKMLWILFIFLFFGAF QIVLLYLFGQSIIAVDMFLNLVTTNSSEAMELLDNLLPAIVTVVILYIPALILGMISIIRKRRLSVAFIRRERKRAFILL GISLLALGGAYWEDSRYELKSDLYPLNVCYNVGLAFQRTALTQNYHHTSKDFTFHAQATHPVDKREVYVMVVGETSRALN WQLYGYERETNPLLSRQPGIVAFSKVLTESNTTHKSVPMLMSDITACNFDSIYHQKGIITAFKEAGYQTAFFSNQRYNHS FIDFFGKEADTFDFIKEDSLDSAYNPSDDELLALVAKELSKGNQKQFIVLHTYGSHFNYRERYPSEDAFFLPDYPVEAEV KYRDNLVNAYDNTIRYTDSFLSRLIHMLEEQHVDAAMLYTSDHGEDIFDDSRHLFLHASPVPSYYQLHVPFLIWMSDTYR EAYPEHWQTVTKNKDKDLSSSRSFFPTMLELGGVQTSYRNDSSSVVSPLYTMKPRVYLNDHNEPRPLDDLGMKQPDFQKC QVLGIKY
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=304, Percent_Identity=29.9342105263158, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI87082286, Length=303, Percent_Identity=29.7029702970297, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI87082223, Length=254, Percent_Identity=29.9212598425197, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1790392, Length=322, Percent_Identity=25.1552795031056, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1787035, Length=489, Percent_Identity=25.3578732106339, Blast_Score=93, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 65736; Mature: 65736
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFKNIKKWFENQEHLFYLFLIILIMPNIVLGFTEPLPLMAKVSNVLLPLACYYLLMTL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SRNCGKMLWILFIFLFFGAFQIVLLYLFGQSIIAVDMFLNLVTTNSSEAMELLDNLLPAI HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTVVILYIPALILGMISIIRKRRLSVAFIRRERKRAFILLGISLLALGGAYWEDSRYELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCHHHH SDLYPLNVCYNVGLAFQRTALTQNYHHTSKDFTFHAQATHPVDKREVYVMVVGETSRALN HCCCEEHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEE WQLYGYERETNPLLSRQPGIVAFSKVLTESNTTHKSVPMLMSDITACNFDSIYHQKGIIT EEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHH AFKEAGYQTAFFSNQRYNHSFIDFFGKEADTFDFIKEDSLDSAYNPSDDELLALVAKELS HHHHCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC KGNQKQFIVLHTYGSHFNYRERYPSEDAFFLPDYPVEAEVKYRDNLVNAYDNTIRYTDSF CCCCCEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHH LSRLIHMLEEQHVDAAMLYTSDHGEDIFDDSRHLFLHASPVPSYYQLHVPFLIWMSDTYR HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCEEEEECCHHH EAYPEHWQTVTKNKDKDLSSSRSFFPTMLELGGVQTSYRNDSSSVVSPLYTMKPRVYLND HHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECC HNEPRPLDDLGMKQPDFQKCQVLGIKY CCCCCCHHHCCCCCCCCCHHEEEECCC >Mature Secondary Structure MKLFKNIKKWFENQEHLFYLFLIILIMPNIVLGFTEPLPLMAKVSNVLLPLACYYLLMTL CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SRNCGKMLWILFIFLFFGAFQIVLLYLFGQSIIAVDMFLNLVTTNSSEAMELLDNLLPAI HCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VTVVILYIPALILGMISIIRKRRLSVAFIRRERKRAFILLGISLLALGGAYWEDSRYELK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCHHHH SDLYPLNVCYNVGLAFQRTALTQNYHHTSKDFTFHAQATHPVDKREVYVMVVGETSRALN HCCCEEHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCCEEE WQLYGYERETNPLLSRQPGIVAFSKVLTESNTTHKSVPMLMSDITACNFDSIYHQKGIIT EEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHH AFKEAGYQTAFFSNQRYNHSFIDFFGKEADTFDFIKEDSLDSAYNPSDDELLALVAKELS HHHHCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC KGNQKQFIVLHTYGSHFNYRERYPSEDAFFLPDYPVEAEVKYRDNLVNAYDNTIRYTDSF CCCCCEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHH LSRLIHMLEEQHVDAAMLYTSDHGEDIFDDSRHLFLHASPVPSYYQLHVPFLIWMSDTYR HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEECCEEEEECCHHH EAYPEHWQTVTKNKDKDLSSSRSFFPTMLELGGVQTSYRNDSSSVVSPLYTMKPRVYLND HHCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECC HNEPRPLDDLGMKQPDFQKCQVLGIKY CCCCCCHHHCCCCCCCCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]