| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29347221
Identifier: 29347221
GI number: 29347221
Start: 2273505
End: 2273828
Strand: Reverse
Name: 29347221
Synonym: BT_1811
Alternate gene names: NA
Gene position: 2273828-2273505 (Counterclockwise)
Preceding gene: 29347222
Following gene: 29347207
Centisome position: 36.32
GC content: 42.9
Gene sequence:
>324_bases ATGAGCACTATGCAGACCGAATTAATTATTGTCAGTGAATACTGTCAGAAGTGTCATATTGAACCTTCATTCATTGAGAT GCTGGAAGAAGGTGGTTTGATTAATGTACGTACCGAAGCCGGAAAGCATTATCTGCTTGTCTCCGAACTTCCGAACGTGG AACGTTATAGCCGGATGTACTATGACTTATCCATCAATATGGAAGGCATTGACGCCATTCATCATATGCTGGAAAGAATG GACGATATGAGGCGTGAAATTACTTCCCTCCGCAAGCAACTTCTGTTGTTTCGGGAAAGGGAAATAGAAGAAGCGGACTG GTGA
Upstream 100 bases:
>100_bases TCGGTGACTTGATTGTTACCTATTCCGTCAAGATTCCGACGAATCTGACAGAAGCGCAGAAGGAGTTGTTCCGTCAATTA CAGAGTATGAACTAAAATGA
Downstream 100 bases:
>100_bases AAAAACGAAGCCTCTGTTTGGTGCAAACGAAGGCTCTATTTATAGCAAACAGAGGCTCTGATCTACGTGAACAGAGCCTC TGTTTTATTCGGGCGGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSTMQTELIIVSEYCQKCHIEPSFIEMLEEGGLINVRTEAGKHYLLVSELPNVERYSRMYYDLSINMEGIDAIHHMLERM DDMRREITSLRKQLLLFREREIEEADW
Sequences:
>Translated_107_residues MSTMQTELIIVSEYCQKCHIEPSFIEMLEEGGLINVRTEAGKHYLLVSELPNVERYSRMYYDLSINMEGIDAIHHMLERM DDMRREITSLRKQLLLFREREIEEADW >Mature_106_residues STMQTELIIVSEYCQKCHIEPSFIEMLEEGGLINVRTEAGKHYLLVSELPNVERYSRMYYDLSINMEGIDAIHHMLERMD DMRREITSLRKQLLLFREREIEEADW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12813; Mature: 12682
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMQTELIIVSEYCQKCHIEPSFIEMLEEGGLINVRTEAGKHYLLVSELPNVERYSRMY CCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHH YDLSINMEGIDAIHHMLERMDDMRREITSLRKQLLLFREREIEEADW HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STMQTELIIVSEYCQKCHIEPSFIEMLEEGGLINVRTEAGKHYLLVSELPNVERYSRMY CCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCCCCHHHHHHHH YDLSINMEGIDAIHHMLERMDDMRREITSLRKQLLLFREREIEEADW HEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA