Click here to switch to the map view.

The map label for this gene is xsa [H]

Identifier: 29347191

GI number: 29347191

Start: 2224974

End: 2227013

Strand: Reverse

Name: xsa [H]

Synonym: BT_1781

Alternate gene names: 29347191

Gene position: 2227013-2224974 (Counterclockwise)

Preceding gene: 29347192

Following gene: 29347190

Centisome position: 35.57

GC content: 45.29

Gene sequence:

>2040_bases
ATGGCACAATCCGGTGGGAAACAGTATAATTCTTACAAAGGATTGGTCATGGCAGGTTATCAGGGGTGGTTCAACACCCC
TGGTGACGGCTCGGGCCGTGGTTGGCATCATTATAATGGACGTAATGGTTTTCGTCCGGGGTCATGCTCGGTAGACCTTT
GGCCTGAAGTGTCGGAGTATAAGAAACTCTATAAGACTGAGTTTTCCTTTGCTGACGGTAAACCGGCTTATGTTTTTTCT
TCTCATGATGAATCTACGGTTGATGTACATTTTAAATGGATGCAGGAGTATGGACTGGACGGAGTATTTATGCAGCGTTT
TATTACGGAGATACGGAACGAAAGCGGATTGAAACACTTTAATAAAGTACTGAATTCAGCGATGAAATTTGCCAATAAAT
ACGAACGGGCTATCTGTGTGATGTACGACCTGAGCGGCATGCAACCGGGAGAAGAGCAGTTGTTGCTGAAAGACATAGCA
GAAATAGCAGAACGCTATTCTTTAAAAGACCATGCAAAGAACCCCTCTTATCTGTATCACAATGGTAAACCGCTGGTTAC
GGTTTGGGGAGTCGGATTTAATGATAATCGTCGCTATGGGCTGAAAGAAGCCGCTCATATTATTGACGGCTTGAAGTCAC
AGGGATTCAGTGTGATGCTTGGAGTACCTACGCAGTGGCGTACACTGAATGGGGACACAGAATCAGATCCCCGCCTGCAT
GAGCTTATCCGAAAATGTGATATCATGATGCCTTGGTTTGTAGGGCGTTATAATGAAACGACTTATCCCAAGTATCAGAA
ACTGGTGGAAGAAGATATTCAGTGGGCAAAGAAGAATCAGGTAGATTATGCTCCGCTGGTCTTCCCCGGTTTCTCATGGG
GAAATCTGAAGGGGAAAGATCATAATTCGTTTATTCCCCGCAATAAAGGTTCTTTCCTTTGGACGCAATTGATGGGAGCC
ATTCGGGCGGGTGCTGAAATGATCTACGTGGCTATGTTTGATGAAATAGATGAAGGGACGGCCATCTTTAAATGTGCTAA
GAAGGTTCCCGTAGGTAAAAGTACATTTGTGCCCCTTGAAGAAGGCGTGGAAAGCGATCATTATTTGAAATTGGTGGGAG
AAGCCGCTAAGATTTTAAGAAAGGAAAAAGCTGTGGCATTTAGTGCAAAGCTGGATACGAAAAGTCCGAATCCTTTTATT
CGGCATATGTATACCGCTGACCCGTCAGCGCATGTATGGGAAGATGGCAGATTGTATGTGTACGCTTCTCATGACATTGC
TCCTCCGCGTGGATGTGACTTGATGGACCGCTATCATGTATTCTCGACTGATGATATGATTAACTGGACGGATCATGGAG
AAATCCTGAGTTCCGACCAAGTGCCGTGGGGACGGAAAGAAGGAGGTTTTATGTGGGCTCCGGATTGTGCTTACAGAAAC
GGCACCTACTATTTCTACTTCCCTCATCCCAGCGAAACAGACTGGAATGATAGCTGGGAGATCGGTGTAGCTACCAGTGA
CAAGCCTGCGGAGGGATTCAAAGTACAGGGATATATTGAGGGAATGGATCCGATGATCGATCCTTGTGTATTTGTGGACG
ATGACGGACAGGCCTATATCTACAATGGTGGCGGTGGTACCTGCAAAGGTGGCAAACTGAAAGATAATATGATAGAACTG
GATGGGCCCATGCGGACTATGGAGGGACTTTCAGACTTCCACGAAGCGACCTGGATACATAAGTATAACGGAAAATATTA
CTTGTCTTATTCTGATAATCACGACGACGGAGAAAAGCATAACCGAATGTGTTATGCCATCAGTGATTCGCCTTTGGGGC
CTTGGGAATACAAGGGAATTTACATGGAACCCACCGATAGTTATACCAACCACGGCTCTATTGTCGAGTTCAAGGGACAA
TGGTATTCTTTCTATCACAACAGTGCATTGTCCGGTCATGATTGGCTGCGCTCTATCTGTGTGGACAAACTGTACTACAA
TCCGGACGGCACTATAAAAATGGTGAAGCAAACTAAATAA

Upstream 100 bases:

>100_bases
TTTTTTGGCAGACGTAATAACATAACATGAAAAATAAAAGAATAACATGGTAAAAAGGTTTGATTGGTTGTTGGTGTGTT
TATTGTTTTCAATAGGGGTG

Downstream 100 bases:

>100_bases
CAGATAGATCCATACACAGGCAATTGATAAATAGAATCCTTATAATAGTTGAAAAACGAACATAGCATGAAAAACAAAAT
GAAATGGATATTGGCAGTAG

Product: xylosidase/arabinosidase

Products: NA

Alternate protein names: Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase; Alpha-N-arabinofuranosidase; Arabinosidase [H]

Number of amino acids: Translated: 679; Mature: 678

Protein sequence:

>679_residues
MAQSGGKQYNSYKGLVMAGYQGWFNTPGDGSGRGWHHYNGRNGFRPGSCSVDLWPEVSEYKKLYKTEFSFADGKPAYVFS
SHDESTVDVHFKWMQEYGLDGVFMQRFITEIRNESGLKHFNKVLNSAMKFANKYERAICVMYDLSGMQPGEEQLLLKDIA
EIAERYSLKDHAKNPSYLYHNGKPLVTVWGVGFNDNRRYGLKEAAHIIDGLKSQGFSVMLGVPTQWRTLNGDTESDPRLH
ELIRKCDIMMPWFVGRYNETTYPKYQKLVEEDIQWAKKNQVDYAPLVFPGFSWGNLKGKDHNSFIPRNKGSFLWTQLMGA
IRAGAEMIYVAMFDEIDEGTAIFKCAKKVPVGKSTFVPLEEGVESDHYLKLVGEAAKILRKEKAVAFSAKLDTKSPNPFI
RHMYTADPSAHVWEDGRLYVYASHDIAPPRGCDLMDRYHVFSTDDMINWTDHGEILSSDQVPWGRKEGGFMWAPDCAYRN
GTYYFYFPHPSETDWNDSWEIGVATSDKPAEGFKVQGYIEGMDPMIDPCVFVDDDGQAYIYNGGGGTCKGGKLKDNMIEL
DGPMRTMEGLSDFHEATWIHKYNGKYYLSYSDNHDDGEKHNRMCYAISDSPLGPWEYKGIYMEPTDSYTNHGSIVEFKGQ
WYSFYHNSALSGHDWLRSICVDKLYYNPDGTIKMVKQTK

Sequences:

>Translated_679_residues
MAQSGGKQYNSYKGLVMAGYQGWFNTPGDGSGRGWHHYNGRNGFRPGSCSVDLWPEVSEYKKLYKTEFSFADGKPAYVFS
SHDESTVDVHFKWMQEYGLDGVFMQRFITEIRNESGLKHFNKVLNSAMKFANKYERAICVMYDLSGMQPGEEQLLLKDIA
EIAERYSLKDHAKNPSYLYHNGKPLVTVWGVGFNDNRRYGLKEAAHIIDGLKSQGFSVMLGVPTQWRTLNGDTESDPRLH
ELIRKCDIMMPWFVGRYNETTYPKYQKLVEEDIQWAKKNQVDYAPLVFPGFSWGNLKGKDHNSFIPRNKGSFLWTQLMGA
IRAGAEMIYVAMFDEIDEGTAIFKCAKKVPVGKSTFVPLEEGVESDHYLKLVGEAAKILRKEKAVAFSAKLDTKSPNPFI
RHMYTADPSAHVWEDGRLYVYASHDIAPPRGCDLMDRYHVFSTDDMINWTDHGEILSSDQVPWGRKEGGFMWAPDCAYRN
GTYYFYFPHPSETDWNDSWEIGVATSDKPAEGFKVQGYIEGMDPMIDPCVFVDDDGQAYIYNGGGGTCKGGKLKDNMIEL
DGPMRTMEGLSDFHEATWIHKYNGKYYLSYSDNHDDGEKHNRMCYAISDSPLGPWEYKGIYMEPTDSYTNHGSIVEFKGQ
WYSFYHNSALSGHDWLRSICVDKLYYNPDGTIKMVKQTK
>Mature_678_residues
AQSGGKQYNSYKGLVMAGYQGWFNTPGDGSGRGWHHYNGRNGFRPGSCSVDLWPEVSEYKKLYKTEFSFADGKPAYVFSS
HDESTVDVHFKWMQEYGLDGVFMQRFITEIRNESGLKHFNKVLNSAMKFANKYERAICVMYDLSGMQPGEEQLLLKDIAE
IAERYSLKDHAKNPSYLYHNGKPLVTVWGVGFNDNRRYGLKEAAHIIDGLKSQGFSVMLGVPTQWRTLNGDTESDPRLHE
LIRKCDIMMPWFVGRYNETTYPKYQKLVEEDIQWAKKNQVDYAPLVFPGFSWGNLKGKDHNSFIPRNKGSFLWTQLMGAI
RAGAEMIYVAMFDEIDEGTAIFKCAKKVPVGKSTFVPLEEGVESDHYLKLVGEAAKILRKEKAVAFSAKLDTKSPNPFIR
HMYTADPSAHVWEDGRLYVYASHDIAPPRGCDLMDRYHVFSTDDMINWTDHGEILSSDQVPWGRKEGGFMWAPDCAYRNG
TYYFYFPHPSETDWNDSWEIGVATSDKPAEGFKVQGYIEGMDPMIDPCVFVDDDGQAYIYNGGGGTCKGGKLKDNMIELD
GPMRTMEGLSDFHEATWIHKYNGKYYLSYSDNHDDGEKHNRMCYAISDSPLGPWEYKGIYMEPTDSYTNHGSIVEFKGQW
YSFYHNSALSGHDWLRSICVDKLYYNPDGTIKMVKQTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37; =3.2.1.55 [H]

Molecular weight: Translated: 77594; Mature: 77463

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSGGKQYNSYKGLVMAGYQGWFNTPGDGSGRGWHHYNGRNGFRPGSCSVDLWPEVSEY
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
KKLYKTEFSFADGKPAYVFSSHDESTVDVHFKWMQEYGLDGVFMQRFITEIRNESGLKHF
HHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHH
NKVLNSAMKFANKYERAICVMYDLSGMQPGEEQLLLKDIAEIAERYSLKDHAKNPSYLYH
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
NGKPLVTVWGVGFNDNRRYGLKEAAHIIDGLKSQGFSVMLGVPTQWRTLNGDTESDPRLH
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHH
ELIRKCDIMMPWFVGRYNETTYPKYQKLVEEDIQWAKKNQVDYAPLVFPGFSWGNLKGKD
HHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
HNSFIPRNKGSFLWTQLMGAIRAGAEMIYVAMFDEIDEGTAIFKCAKKVPVGKSTFVPLE
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHH
EGVESDHYLKLVGEAAKILRKEKAVAFSAKLDTKSPNPFIRHMYTADPSAHVWEDGRLYV
HCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHEEEECCCCCEEECCCEEEE
YASHDIAPPRGCDLMDRYHVFSTDDMINWTDHGEILSSDQVPWGRKEGGFMWAPDCAYRN
EECCCCCCCCCCCHHHCEEEECCCCCEEECCCCCEECCCCCCCCCCCCCEEECCCCCCCC
GTYYFYFPHPSETDWNDSWEIGVATSDKPAEGFKVQGYIEGMDPMIDPCVFVDDDGQAYI
CEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEE
YNGGGGTCKGGKLKDNMIELDGPMRTMEGLSDFHEATWIHKYNGKYYLSYSDNHDDGEKH
EECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCHHH
NRMCYAISDSPLGPWEYKGIYMEPTDSYTNHGSIVEFKGQWYSFYHNSALSGHDWLRSIC
CCEEEEECCCCCCCCEECCEEECCCCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHH
VDKLYYNPDGTIKMVKQTK
HHHEEECCCCCEEEEEECC
>Mature Secondary Structure 
AQSGGKQYNSYKGLVMAGYQGWFNTPGDGSGRGWHHYNGRNGFRPGSCSVDLWPEVSEY
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHH
KKLYKTEFSFADGKPAYVFSSHDESTVDVHFKWMQEYGLDGVFMQRFITEIRNESGLKHF
HHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHCCCCHHHH
NKVLNSAMKFANKYERAICVMYDLSGMQPGEEQLLLKDIAEIAERYSLKDHAKNPSYLYH
HHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEEE
NGKPLVTVWGVGFNDNRRYGLKEAAHIIDGLKSQGFSVMLGVPTQWRTLNGDTESDPRLH
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCCCCHHHH
ELIRKCDIMMPWFVGRYNETTYPKYQKLVEEDIQWAKKNQVDYAPLVFPGFSWGNLKGKD
HHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCC
HNSFIPRNKGSFLWTQLMGAIRAGAEMIYVAMFDEIDEGTAIFKCAKKVPVGKSTFVPLE
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCHH
EGVESDHYLKLVGEAAKILRKEKAVAFSAKLDTKSPNPFIRHMYTADPSAHVWEDGRLYV
HCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHEEEECCCCCEEECCCEEEE
YASHDIAPPRGCDLMDRYHVFSTDDMINWTDHGEILSSDQVPWGRKEGGFMWAPDCAYRN
EECCCCCCCCCCCHHHCEEEECCCCCEEECCCCCEECCCCCCCCCCCCCEEECCCCCCCC
GTYYFYFPHPSETDWNDSWEIGVATSDKPAEGFKVQGYIEGMDPMIDPCVFVDDDGQAYI
CEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEE
YNGGGGTCKGGKLKDNMIELDGPMRTMEGLSDFHEATWIHKYNGKYYLSYSDNHDDGEKH
EECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCEEEEECCEEEEEECCCCCCCHHH
NRMCYAISDSPLGPWEYKGIYMEPTDSYTNHGSIVEFKGQWYSFYHNSALSGHDWLRSIC
CCEEEEECCCCCCCCEECCEEECCCCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHH
VDKLYYNPDGTIKMVKQTK
HHHEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]