| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347155
Identifier: 29347155
GI number: 29347155
Start: 2153282
End: 2154478
Strand: Reverse
Name: 29347155
Synonym: BT_1745
Alternate gene names: NA
Gene position: 2154478-2153282 (Counterclockwise)
Preceding gene: 29347159
Following gene: 29347153
Centisome position: 34.41
GC content: 49.62
Gene sequence:
>1197_bases ATGACGAAAAGACCTGTTTATATATTCAATCCGGAGCATGATATGGCGTTGGCAAGCGGTGAGACGAACTATATGGCGCC GGCTTCCGCCCGACAGATGGCGAGTGACCTGGCGTTGCTTCCTATGTGGTATGCCGAAGCGGGAAGTGCGGTGCTTGCAC CGTCTGCTTATAATGCGGACTTCCTGAAAACAAAGAGTGAACTTTTGGGCATGGATGTGGCCTTGTTGACGGAACCGGAA GTGGCTGACGGTAAAGACCGGAAGTTCTCTCCGTGGGGGTGGGACCCTGCTTTGCGGAAGCGTTTGATGACATTGGGGGC AGATCAGACGGAGCTGCCTTCTGCGGATTATATGAATATTCTGAGAGAGCATTCGCATCGTCTGCAGGCGGTAAAGTTGT TGCCTGGGTTGCGGTTGAATGAATACTTCTGTGGAGAATCTTTTTATTTGAGTACTTTGGCGGAGTGCAGTGCGTTCGTC GAAGGGCGGGAAGCGTGCTTGTTAAAAGCTCCGCTTTCCGGAAGCGGGAAAGGATTGAATTGGTGTAAAGGCATATTTAC TACTTTTATTTCCGGTTGGTGTGCCCGTGTCGCTGCTTCTCAGGGTGGGGTGGTAGGCGAACCTATATATAATAAGGTGG AAGATTTCGCTATGGAGTTTTATGCTGACGGGAGAGGAAGGGTTGTTTTTGCCGGATATTCGGTCTTCCACACGGGTGGG AGTGGGATGTATGCAGGGAATGACTTGCTGTCTGACGAGAAGATTCTGCAGAAACTATCGGCTTATGTGCCACAAGAAGA ATTTATCAGGCTGCGGACTCGTTTGGAAGAAGAATTGTCAGCTTTGTTCGGTGGCTTTTATCATGGATACTTGGGAGTGG ATATGATGATTTGTCATTTTCCGGATGAAGCGCCTGTTTACCGGATTCATCCTTGTGTCGAAATTAATCTGCGAATGAAT ATGGGGGTGGTGGCATGGCTCTTGACGGATCGTTATTTGGCTGCGGATGCGGAAGGAGTTTTTCGGATTGATTATTATCC TTTAGCCGGTCAGGCTTTGGAGGAACATCGGCAGATGTCGGCTTCGTTCCCTTTGTCCGTAGAGAATAATCGGGTGTGTG CCGGATATTTGCCGTTAGTACCGGTGACGCCTCAAAGCCGGTATCGTGCGTTTCTTTTGCTTACTCTCCCCCAGTGA
Upstream 100 bases:
>100_bases GCAAAAATGTGCTTTAATTTATAAGTTTCTCTTTATTGTGTAAGTTCCTGATTATTTCCTGTATATATTTGCAGAATAAT GTGTTGAATCCATCTTTGAC
Downstream 100 bases:
>100_bases AAAAGATAGTGCTTTTGCTCTCATGCTCTAACAGTTCGTCTGTATCCCTTTATTCATCGATGTTTTAGCTGTTAGAGATC CAGTGGTAGCAGAGTGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTKRPVYIFNPEHDMALASGETNYMAPASARQMASDLALLPMWYAEAGSAVLAPSAYNADFLKTKSELLGMDVALLTEPE VADGKDRKFSPWGWDPALRKRLMTLGADQTELPSADYMNILREHSHRLQAVKLLPGLRLNEYFCGESFYLSTLAECSAFV EGREACLLKAPLSGSGKGLNWCKGIFTTFISGWCARVAASQGGVVGEPIYNKVEDFAMEFYADGRGRVVFAGYSVFHTGG SGMYAGNDLLSDEKILQKLSAYVPQEEFIRLRTRLEEELSALFGGFYHGYLGVDMMICHFPDEAPVYRIHPCVEINLRMN MGVVAWLLTDRYLAADAEGVFRIDYYPLAGQALEEHRQMSASFPLSVENNRVCAGYLPLVPVTPQSRYRAFLLLTLPQ
Sequences:
>Translated_398_residues MTKRPVYIFNPEHDMALASGETNYMAPASARQMASDLALLPMWYAEAGSAVLAPSAYNADFLKTKSELLGMDVALLTEPE VADGKDRKFSPWGWDPALRKRLMTLGADQTELPSADYMNILREHSHRLQAVKLLPGLRLNEYFCGESFYLSTLAECSAFV EGREACLLKAPLSGSGKGLNWCKGIFTTFISGWCARVAASQGGVVGEPIYNKVEDFAMEFYADGRGRVVFAGYSVFHTGG SGMYAGNDLLSDEKILQKLSAYVPQEEFIRLRTRLEEELSALFGGFYHGYLGVDMMICHFPDEAPVYRIHPCVEINLRMN MGVVAWLLTDRYLAADAEGVFRIDYYPLAGQALEEHRQMSASFPLSVENNRVCAGYLPLVPVTPQSRYRAFLLLTLPQ >Mature_397_residues TKRPVYIFNPEHDMALASGETNYMAPASARQMASDLALLPMWYAEAGSAVLAPSAYNADFLKTKSELLGMDVALLTEPEV ADGKDRKFSPWGWDPALRKRLMTLGADQTELPSADYMNILREHSHRLQAVKLLPGLRLNEYFCGESFYLSTLAECSAFVE GREACLLKAPLSGSGKGLNWCKGIFTTFISGWCARVAASQGGVVGEPIYNKVEDFAMEFYADGRGRVVFAGYSVFHTGGS GMYAGNDLLSDEKILQKLSAYVPQEEFIRLRTRLEEELSALFGGFYHGYLGVDMMICHFPDEAPVYRIHPCVEINLRMNM GVVAWLLTDRYLAADAEGVFRIDYYPLAGQALEEHRQMSASFPLSVENNRVCAGYLPLVPVTPQSRYRAFLLLTLPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44277; Mature: 44146
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRPVYIFNPEHDMALASGETNYMAPASARQMASDLALLPMWYAEAGSAVLAPSAYNAD CCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH FLKTKSELLGMDVALLTEPEVADGKDRKFSPWGWDPALRKRLMTLGADQTELPSADYMNI HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH LREHSHRLQAVKLLPGLRLNEYFCGESFYLSTLAECSAFVEGREACLLKAPLSGSGKGLN HHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH WCKGIFTTFISGWCARVAASQGGVVGEPIYNKVEDFAMEFYADGRGRVVFAGYSVFHTGG HHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECC SGMYAGNDLLSDEKILQKLSAYVPQEEFIRLRTRLEEELSALFGGFYHGYLGVDMMICHF CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC PDEAPVYRIHPCVEINLRMNMGVVAWLLTDRYLAADAEGVFRIDYYPLAGQALEEHRQMS CCCCCEEEECCEEEEEEEECCCEEEHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHC ASFPLSVENNRVCAGYLPLVPVTPQSRYRAFLLLTLPQ CCCCEEECCCEEEEECCCEEECCCCCCCEEEEEEECCC >Mature Secondary Structure TKRPVYIFNPEHDMALASGETNYMAPASARQMASDLALLPMWYAEAGSAVLAPSAYNAD CCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH FLKTKSELLGMDVALLTEPEVADGKDRKFSPWGWDPALRKRLMTLGADQTELPSADYMNI HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH LREHSHRLQAVKLLPGLRLNEYFCGESFYLSTLAECSAFVEGREACLLKAPLSGSGKGLN HHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH WCKGIFTTFISGWCARVAASQGGVVGEPIYNKVEDFAMEFYADGRGRVVFAGYSVFHTGG HHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECC SGMYAGNDLLSDEKILQKLSAYVPQEEFIRLRTRLEEELSALFGGFYHGYLGVDMMICHF CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC PDEAPVYRIHPCVEINLRMNMGVVAWLLTDRYLAADAEGVFRIDYYPLAGQALEEHRQMS CCCCCEEEECCEEEEEEEECCCEEEHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHC ASFPLSVENNRVCAGYLPLVPVTPQSRYRAFLLLTLPQ CCCCEEECCCEEEEECCCEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA