| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347153
Identifier: 29347153
GI number: 29347153
Start: 2149554
End: 2151077
Strand: Reverse
Name: 29347153
Synonym: BT_1743
Alternate gene names: NA
Gene position: 2151077-2149554 (Counterclockwise)
Preceding gene: 29347155
Following gene: 29347152
Centisome position: 34.36
GC content: 41.54
Gene sequence:
>1524_bases ATGAAAAAGCTACTATCTGTGTCGCTCTGTCTTTTGTTTGCGGCGAGTCTGACTGCCCAGACGGGAAAGATTAGAGTTGC TACTGTTGGAAACAGTATCACCGGGGGAACGAATGATTATGGTTATTACGCGATGCCTCTGGCTGAAATGCTCGGTGATG ATTATGAAGTTACCAAATTTGGTAAAGGCTCTTCCGGGGTATTTATAAAATTAAGAGAAGATGCGACTACTCCCGAAAAT CCTAATGAATATCAATTCGCTTACATTAATTCTGAGCAATGCGCAGCGGCACTTGAGTATAAACCTAATATTGTCATTAT TAAGTTTGGTGCAAATGATGCCAACAAGAAGAATTTCGAAAAATATGGTAAAGAGACTTTTAAAGCAGACTATAAGAAGT TGATCGCTAAATTCCAGGCTCTTTCGACTAAACCGGATATTTATATTTGTACGCCTCCGCCGATGTATTATGGCGATGGG GGATTTCTTGGTTCATTTGATGACAATGTAGCAAAGAATTATATTCAGCCTGCCGTAAGAGAGATTGCGGAGGAACTTAA TCTGGTCTGTGTAGATCTGTATAATCCCTTGAAGGGACATCCGGAATTTATGCCGGGTGGCAACGATTGGGTGCATCCCG ACCATAGAGGGCATTATATTATAGCGAAGGAAGTGTATAAGGCGATAACGGGTGAATTCGTTATGAACCCCGGTGGGATA ACAGTGGCTGCTTCGGATATTTCTCTTTCGGGTTCGAAGGCGAAGATGAAGAATGGTGCTATTGAAAAAGCGAAGAACGG TACGAGATTGTCATTCGATGTACATTTTGGCTCATTGCCTACGTATGAGAAAGTAGAGGTTGACGTGCAATTGAATAAAA AGAAATCGGGATACTTGGATTTCTATCTGGATACTGAAACAATTCCTTTTGCCTCGGTTGATGTTTCGGGTGCCGACTCT AAGAATTTCACTACACAATCTGCTCTTTTCGACCGTCGGATAAAAGGCAAACATAAAGTGACTGTACAATGGAGAGGACA GGATGCCAAACTGAAATCAGTAACTATCAAGGAAAAATATATGCCTTATGTAACCGATAATGTATCTCAGGTCTATTTGG TAAACAAGGCAACCGGTATGGTACTGGATTGTAATCCGGATTCGAAAGTGATTTCTGCCGCAAAATATGATTCGGAAAAG AAGTCCCAGTTGTTTTGTATCGAGAATTTGACGTATCATATCCTCCGTGTCAGAAATATAGCGACCAACCTTCATGTAAT GAATAATGGAGATAAAGTGATTGTGGGTAAGCCGGGTGATGACTGGCGAGTGCATGATCCTAAATATGCATTGTTCCTGA CACCTACGGATGATGAAGGCTATTATTCATTGGGGCTGTCTCCTGAAGCAAGAATTGGTTTGTCTTCTGCCAACAGCACA GAGGTGGTAGGCAATAGAAGCGGCCAAATTGAAGACTTGGATAAATGGAAAATCGTGACAGCTGATGAAATGAAGAAGCA GTAA
Upstream 100 bases:
>100_bases GACAGAAAATTACTGATTCTCTTTTAGTGGTATCTGCATTCTTAGCCGTCTTTTAATAAGGTACGAAATATAAAATATTA ATATAACAAGATAATAAACA
Downstream 100 bases:
>100_bases TTCAGACCTTGGTGTATATATTGGATTATCTATATTAGCATTGAAAAGAAAGGAGGTTGTATCTGAACCTTTGCCGGAAG AACAAGAAACAAAAGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Xylanase; Acetylesterase/GDSL-Like Lipase/Acylhydrolase; Esterase; Lipolytic Protein G-D-S-L Family; O-Antigen-Like Protein
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKKLLSVSLCLLFAASLTAQTGKIRVATVGNSITGGTNDYGYYAMPLAEMLGDDYEVTKFGKGSSGVFIKLREDATTPEN PNEYQFAYINSEQCAAALEYKPNIVIIKFGANDANKKNFEKYGKETFKADYKKLIAKFQALSTKPDIYICTPPPMYYGDG GFLGSFDDNVAKNYIQPAVREIAEELNLVCVDLYNPLKGHPEFMPGGNDWVHPDHRGHYIIAKEVYKAITGEFVMNPGGI TVAASDISLSGSKAKMKNGAIEKAKNGTRLSFDVHFGSLPTYEKVEVDVQLNKKKSGYLDFYLDTETIPFASVDVSGADS KNFTTQSALFDRRIKGKHKVTVQWRGQDAKLKSVTIKEKYMPYVTDNVSQVYLVNKATGMVLDCNPDSKVISAAKYDSEK KSQLFCIENLTYHILRVRNIATNLHVMNNGDKVIVGKPGDDWRVHDPKYALFLTPTDDEGYYSLGLSPEARIGLSSANST EVVGNRSGQIEDLDKWKIVTADEMKKQ
Sequences:
>Translated_507_residues MKKLLSVSLCLLFAASLTAQTGKIRVATVGNSITGGTNDYGYYAMPLAEMLGDDYEVTKFGKGSSGVFIKLREDATTPEN PNEYQFAYINSEQCAAALEYKPNIVIIKFGANDANKKNFEKYGKETFKADYKKLIAKFQALSTKPDIYICTPPPMYYGDG GFLGSFDDNVAKNYIQPAVREIAEELNLVCVDLYNPLKGHPEFMPGGNDWVHPDHRGHYIIAKEVYKAITGEFVMNPGGI TVAASDISLSGSKAKMKNGAIEKAKNGTRLSFDVHFGSLPTYEKVEVDVQLNKKKSGYLDFYLDTETIPFASVDVSGADS KNFTTQSALFDRRIKGKHKVTVQWRGQDAKLKSVTIKEKYMPYVTDNVSQVYLVNKATGMVLDCNPDSKVISAAKYDSEK KSQLFCIENLTYHILRVRNIATNLHVMNNGDKVIVGKPGDDWRVHDPKYALFLTPTDDEGYYSLGLSPEARIGLSSANST EVVGNRSGQIEDLDKWKIVTADEMKKQ >Mature_507_residues MKKLLSVSLCLLFAASLTAQTGKIRVATVGNSITGGTNDYGYYAMPLAEMLGDDYEVTKFGKGSSGVFIKLREDATTPEN PNEYQFAYINSEQCAAALEYKPNIVIIKFGANDANKKNFEKYGKETFKADYKKLIAKFQALSTKPDIYICTPPPMYYGDG GFLGSFDDNVAKNYIQPAVREIAEELNLVCVDLYNPLKGHPEFMPGGNDWVHPDHRGHYIIAKEVYKAITGEFVMNPGGI TVAASDISLSGSKAKMKNGAIEKAKNGTRLSFDVHFGSLPTYEKVEVDVQLNKKKSGYLDFYLDTETIPFASVDVSGADS KNFTTQSALFDRRIKGKHKVTVQWRGQDAKLKSVTIKEKYMPYVTDNVSQVYLVNKATGMVLDCNPDSKVISAAKYDSEK KSQLFCIENLTYHILRVRNIATNLHVMNNGDKVIVGKPGDDWRVHDPKYALFLTPTDDEGYYSLGLSPEARIGLSSANST EVVGNRSGQIEDLDKWKIVTADEMKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56254; Mature: 56254
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSVSLCLLFAASLTAQTGKIRVATVGNSITGGTNDYGYYAMPLAEMLGDDYEVTKF CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHCCCCEEEEEC GKGSSGVFIKLREDATTPENPNEYQFAYINSEQCAAALEYKPNIVIIKFGANDANKKNFE CCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHEEEECCCCEEEEEECCCCCCCHHHH KYGKETFKADYKKLIAKFQALSTKPDIYICTPPPMYYGDGGFLGSFDDNVAKNYIQPAVR HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCEECCCCCHHHHHHHHHHHH EIAEELNLVCVDLYNPLKGHPEFMPGGNDWVHPDHRGHYIIAKEVYKAITGEFVMNPGGI HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCE TVAASDISLSGSKAKMKNGAIEKAKNGTRLSFDVHFGSLPTYEKVEVDVQLNKKKSGYLD EEEEECEEECCCHHHHCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEE FYLDTETIPFASVDVSGADSKNFTTQSALFDRRIKGKHKVTVQWRGQDAKLKSVTIKEKY EEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHC MPYVTDNVSQVYLVNKATGMVLDCNPDSKVISAAKYDSEKKSQLFCIENLTYHILRVRNI CCEEECCCEEEEEEECCCCEEEECCCCCCEEEEHHCCCCCCCEEEEECCCCEEEHEEEEH ATNLHVMNNGDKVIVGKPGDDWRVHDPKYALFLTPTDDEGYYSLGLSPEARIGLSSANST EEEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCE EVVGNRSGQIEDLDKWKIVTADEMKKQ EEECCCCCCCCCCCCEEEEEHHHHCCC >Mature Secondary Structure MKKLLSVSLCLLFAASLTAQTGKIRVATVGNSITGGTNDYGYYAMPLAEMLGDDYEVTKF CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEEHHHHCCCCEEEEEC GKGSSGVFIKLREDATTPENPNEYQFAYINSEQCAAALEYKPNIVIIKFGANDANKKNFE CCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHEEEECCCCEEEEEECCCCCCCHHHH KYGKETFKADYKKLIAKFQALSTKPDIYICTPPPMYYGDGGFLGSFDDNVAKNYIQPAVR HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCEECCCCCHHHHHHHHHHHH EIAEELNLVCVDLYNPLKGHPEFMPGGNDWVHPDHRGHYIIAKEVYKAITGEFVMNPGGI HHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCEEECCCCE TVAASDISLSGSKAKMKNGAIEKAKNGTRLSFDVHFGSLPTYEKVEVDVQLNKKKSGYLD EEEEECEEECCCHHHHCCCCHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCEEE FYLDTETIPFASVDVSGADSKNFTTQSALFDRRIKGKHKVTVQWRGQDAKLKSVTIKEKY EEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHC MPYVTDNVSQVYLVNKATGMVLDCNPDSKVISAAKYDSEKKSQLFCIENLTYHILRVRNI CCEEECCCEEEEEEECCCCEEEECCCCCCEEEEHHCCCCCCCEEEEECCCCEEEHEEEEH ATNLHVMNNGDKVIVGKPGDDWRVHDPKYALFLTPTDDEGYYSLGLSPEARIGLSSANST EEEEEEEECCCEEEEECCCCCCEEECCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCE EVVGNRSGQIEDLDKWKIVTADEMKKQ EEECCCCCCCCCCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA