| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347090
Identifier: 29347090
GI number: 29347090
Start: 2072235
End: 2072771
Strand: Reverse
Name: 29347090
Synonym: BT_1680
Alternate gene names: NA
Gene position: 2072771-2072235 (Counterclockwise)
Preceding gene: 29347091
Following gene: 29347089
Centisome position: 33.11
GC content: 45.07
Gene sequence:
>537_bases ATGGAAAATTTCAGTGAACTGATAAAGAATCGCCGCAGTATGCGCAAATTTACGGATGAGGAGTTAACACAGGATGAGGT TGTGGCACTGATGAAAGCTGCCTTGATGTCTCCCAGTTCCAAACGTAGTAATAGCTGGCAGTTTGTGGTAGTCGATGATA AAGAAAAGTTGAAAGAACTGTCTCACTGCAAAGAGCAGGCTTCCTCGTTCATTGCGGATGCTGCTTTGGCGATTGTTGTG ATGGCTGATCCGTTGGCAAGCGATGTGTGGATTGAAGATGCTTCTATTGCTTCCATCATGATACAGTTGCAGGCGGAAGA TTTGGGGCTGGGAAGCTGTTGGGTACAGGTTCGCGAACGTTTCACTGCAACCGGAATGCCGTCTGACGAGTTTGTTCATG GAATTTTGGATATTCCTTTGCAACTGCAGATTCTTTCCGTGATTGCCATCGGACATAAGGGAATGGAACGTAAGCCTTTC AACGAAGAACACCTCCAGTGGGAGAAAATTCATATTAATAAGTTCGGAGGAAAATAA
Upstream 100 bases:
>100_bases TAATGAATATATTTCTCAGTGCAAAGATACAATTTCATTTCTTATTACGATCGGTTTGCGCTATCTTTGCATACATAAAT CAAATGAAAACGGAAATAAT
Downstream 100 bases:
>100_bases CGATGGGAGCTGTCAAAGCAAATAATAATAAAGATACTTATAAGGCTACTGCCGTCGCTTTTATTGTTATCGGAACTCTT TTCCTGATAAATAAACTGCT
Product: putative NADH dehydrogenase/NAD(P)H nitroreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MENFSELIKNRRSMRKFTDEELTQDEVVALMKAALMSPSSKRSNSWQFVVVDDKEKLKELSHCKEQASSFIADAALAIVV MADPLASDVWIEDASIASIMIQLQAEDLGLGSCWVQVRERFTATGMPSDEFVHGILDIPLQLQILSVIAIGHKGMERKPF NEEHLQWEKIHINKFGGK
Sequences:
>Translated_178_residues MENFSELIKNRRSMRKFTDEELTQDEVVALMKAALMSPSSKRSNSWQFVVVDDKEKLKELSHCKEQASSFIADAALAIVV MADPLASDVWIEDASIASIMIQLQAEDLGLGSCWVQVRERFTATGMPSDEFVHGILDIPLQLQILSVIAIGHKGMERKPF NEEHLQWEKIHINKFGGK >Mature_178_residues MENFSELIKNRRSMRKFTDEELTQDEVVALMKAALMSPSSKRSNSWQFVVVDDKEKLKELSHCKEQASSFIADAALAIVV MADPLASDVWIEDASIASIMIQLQAEDLGLGSCWVQVRERFTATGMPSDEFVHGILDIPLQLQILSVIAIGHKGMERKPF NEEHLQWEKIHINKFGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 20087; Mature: 20087
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENFSELIKNRRSMRKFTDEELTQDEVVALMKAALMSPSSKRSNSWQFVVVDDKEKLKEL CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHH SHCKEQASSFIADAALAIVVMADPLASDVWIEDASIASIMIQLQAEDLGLGSCWVQVRER HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHEEEECCCCCCHHHHHHHHHH FTATGMPSDEFVHGILDIPLQLQILSVIAIGHKGMERKPFNEEHLQWEKIHINKFGGK HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCC >Mature Secondary Structure MENFSELIKNRRSMRKFTDEELTQDEVVALMKAALMSPSSKRSNSWQFVVVDDKEKLKEL CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHH SHCKEQASSFIADAALAIVVMADPLASDVWIEDASIASIMIQLQAEDLGLGSCWVQVRER HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHEEEECCCCCCHHHHHHHHHH FTATGMPSDEFVHGILDIPLQLQILSVIAIGHKGMERKPFNEEHLQWEKIHINKFGGK HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]