| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29347089
Identifier: 29347089
GI number: 29347089
Start: 2071897
End: 2072232
Strand: Reverse
Name: 29347089
Synonym: BT_1679
Alternate gene names: NA
Gene position: 2072232-2071897 (Counterclockwise)
Preceding gene: 29347090
Following gene: 29347088
Centisome position: 33.1
GC content: 39.88
Gene sequence:
>336_bases ATGGGAGCTGTCAAAGCAAATAATAATAAAGATACTTATAAGGCTACTGCCGTCGCTTTTATTGTTATCGGAACTCTTTT CCTGATAAATAAACTGCTCCCCTTTGCTTCTATAGGTTTGCCTTGGGTGATGAATAAGGACAATTTGTTGTTGTATGCCT CTATCAGTTTTCTTATTTTCAAGCGTGACAAGTCGGTCGGCTTTGTGCTGTTGGGACTGTGGCTGGTAATGAATATCGGT CTGGTAATGTCATTGCTCGGTTCCTTGTCCGGTTATCTGTTGCCATTGGCACTGTTGATCATCGGAATTATTTTATTTTG GGTTTCAAAACGTTAA
Upstream 100 bases:
>100_bases TGATTGCCATCGGACATAAGGGAATGGAACGTAAGCCTTTCAACGAAGAACACCTCCAGTGGGAGAAAATTCATATTAAT AAGTTCGGAGGAAAATAACG
Downstream 100 bases:
>100_bases AGAAACAATGAAAAGAAGTATTGAAGATACGCCCGTTGTGTTTCTCGGTGCCGGAAATCTGGCAACTAATCTGGCGAAAG CGCTTTACCGGAAAGGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MGAVKANNNKDTYKATAVAFIVIGTLFLINKLLPFASIGLPWVMNKDNLLLYASISFLIFKRDKSVGFVLLGLWLVMNIG LVMSLLGSLSGYLLPLALLIIGIILFWVSKR
Sequences:
>Translated_111_residues MGAVKANNNKDTYKATAVAFIVIGTLFLINKLLPFASIGLPWVMNKDNLLLYASISFLIFKRDKSVGFVLLGLWLVMNIG LVMSLLGSLSGYLLPLALLIIGIILFWVSKR >Mature_110_residues GAVKANNNKDTYKATAVAFIVIGTLFLINKLLPFASIGLPWVMNKDNLLLYASISFLIFKRDKSVGFVLLGLWLVMNIGL VMSLLGSLSGYLLPLALLIIGIILFWVSKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12216; Mature: 12085
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAVKANNNKDTYKATAVAFIVIGTLFLINKLLPFASIGLPWVMNKDNLLLYASISFLIF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHEEEEE KRDKSVGFVLLGLWLVMNIGLVMSLLGSLSGYLLPLALLIIGIILFWVSKR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GAVKANNNKDTYKATAVAFIVIGTLFLINKLLPFASIGLPWVMNKDNLLLYASISFLIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEHEEEEE KRDKSVGFVLLGLWLVMNIGLVMSLLGSLSGYLLPLALLIIGIILFWVSKR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA