Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346971

Identifier: 29346971

GI number: 29346971

Start: 1927829

End: 1928221

Strand: Reverse

Name: 29346971

Synonym: BT_1561

Alternate gene names: NA

Gene position: 1928221-1927829 (Counterclockwise)

Preceding gene: 29346973

Following gene: 29346970

Centisome position: 30.8

GC content: 43.51

Gene sequence:

>393_bases
ATGAAGAAACGAGTGCTTTTAGGAATGGCCTCTTTGCTTCTTTCTGTCTCATTGCTGATGGCGCAGGAGATACCGGCAGG
AGTGATTACGGCATTTAAGCGGGGAAGCTCGCAGGAACTGAGTAAGTATATGGGAGACAAGGTAAACCTCGTTCTCCAAG
GCAGCTCGGCAAACGTTGACAAGAAGAAAGCGACAGCAATGATGCAAGAGTTTTTCACGGAAAACAAGGTCAACGCATTT
GACGTGAATCATCAGGGAAAACGGGATGAATCCAGTTTTGTCATAGGTACGCTGACGACTACAAAAGGGAAATTCCGTGT
GAACTGCTTCCTGAAAAAAGTGCAGACTCAATATTTAATACACCAAATAAGAATTGACAAGATCAATGAATAA

Upstream 100 bases:

>100_bases
AAATAGGCATTTTTTATGTTATTCTGCAATTAATGCTTACCTTTGCCTATCATTAGTTGAAAGTTTAAGCCTTTAAACTT
CAACCCAAAAGCTTGGATTT

Downstream 100 bases:

>100_bases
GGAAAAAGAACTGATCGACAAACTGATCGATCTTGCTTTTGCAGAAGATATAGGTGATGGTGACCATACCACCCTTTCGT
GTATTCCCGCTACTGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MKKRVLLGMASLLLSVSLLMAQEIPAGVITAFKRGSSQELSKYMGDKVNLVLQGSSANVDKKKATAMMQEFFTENKVNAF
DVNHQGKRDESSFVIGTLTTTKGKFRVNCFLKKVQTQYLIHQIRIDKINE

Sequences:

>Translated_130_residues
MKKRVLLGMASLLLSVSLLMAQEIPAGVITAFKRGSSQELSKYMGDKVNLVLQGSSANVDKKKATAMMQEFFTENKVNAF
DVNHQGKRDESSFVIGTLTTTKGKFRVNCFLKKVQTQYLIHQIRIDKINE
>Mature_130_residues
MKKRVLLGMASLLLSVSLLMAQEIPAGVITAFKRGSSQELSKYMGDKVNLVLQGSSANVDKKKATAMMQEFFTENKVNAF
DVNHQGKRDESSFVIGTLTTTKGKFRVNCFLKKVQTQYLIHQIRIDKINE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14572; Mature: 14572

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRVLLGMASLLLSVSLLMAQEIPAGVITAFKRGSSQELSKYMGDKVNLVLQGSSANVD
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCC
KKKATAMMQEFFTENKVNAFDVNHQGKRDESSFVIGTLTTTKGKFRVNCFLKKVQTQYLI
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHH
HQIRIDKINE
HHHHHCCCCC
>Mature Secondary Structure
MKKRVLLGMASLLLSVSLLMAQEIPAGVITAFKRGSSQELSKYMGDKVNLVLQGSSANVD
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCC
KKKATAMMQEFFTENKVNAFDVNHQGKRDESSFVIGTLTTTKGKFRVNCFLKKVQTQYLI
HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEHHHHHHHHHHHHHH
HQIRIDKINE
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA