Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346965

Identifier: 29346965

GI number: 29346965

Start: 1922759

End: 1923694

Strand: Reverse

Name: 29346965

Synonym: BT_1555

Alternate gene names: NA

Gene position: 1923694-1922759 (Counterclockwise)

Preceding gene: 29346966

Following gene: 29346960

Centisome position: 30.73

GC content: 50.53

Gene sequence:

>936_bases
ATGAACAGAATTACTTCTCTTTTCGGTATTCAGTATCCTATTATTCAAGGTGGCATGGTGTGGTGTAGCGGTTGGCGTCT
CGCTTCCGCAGTAAGTAATGCGGGAGGATTGGGACTGCTTGGCGCAGGCTCTATGCATCCGGAGACTCTTCGTGAACATA
TCCGGAAATGCCGTGCGGCTACAGACCGTCCCTTTGGAGTCAATATTCCCTTGATGTATCCTCAGATTGAAGAAATCATG
GCGATTGTTGCCGAAGAGGGCGTCAAGATCGTTTTCACTTCTGCCGGAAATCCTAAAGCATGGACCGGATGGCTGCACGA
ACGTGGTATTATCGTAGCTCATGTCGTTTCCTCTTCCCGTTTCGCGATGAAATGTGAAGAGGCGGGAGTAGATGCGGTAG
TCGCTGAAGGTTTCGAAGCCGGCGGACATAACGGGCGTGAAGAAACTACCACTTTCTGCTTGATTCCTGCGGTACGTAGT
GCGACCACTTTGCCTTTGATCGCTGCAGGAGGTATCGGTACGGGAGAAGGTATCTTTGCTGCCATGGTGCTGGGAGCAGA
AGGGGTACAAATCGGTACTCGCTTTGCGTTGACGGATGAAAGTTCAGCCAGCCCGGTCTTCAAAGAATATTGTCTGGGTT
TGGGAGAAGGAGATACTAAATTATTATTGAAGAAACTGGCTCCGACACGTTTAGTGCGGAATAATTTCCGGGATGCTGTG
GAGAGGGCTGAGGATGGCGGTGCTTCTGCCGAAGAATTGCGGACTCTTCTTGGGAGAGGTCGTGCGAAGAAAGGTATCTT
TGAAGGGGATCTGGAAGAAGGCGAACTGGAGATAGGGCAGGTGTCGGCTATTGTTTCCCGTCAGCAGTCAGTAGCGGAAG
TCATGAATGAATTGGTGGAGGCTATGCAGCGGGCAGCGGAGAAGAAATATTGGTAA

Upstream 100 bases:

>100_bases
CGCCCCATTGAACAGATTGCCCGCTGAAACTGTTTTATTAAATATGGACATGTCTCATGTTCCATGTTATCAGATTAGCA
CATTGAAAAACGATTAATTT

Downstream 100 bases:

>100_bases
AAAAACAAGTTCCGAAGTAGTGGGTTTGGAAAACCTGACTACTTCAGAACTTTACTACTTCAGAAAGTTGGCTGCTTAAT
CAATTTATAGGTTTATATTT

Product: dioxygenase, related to 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM
AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS
ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV
ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW

Sequences:

>Translated_311_residues
MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM
AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS
ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV
ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW
>Mature_311_residues
MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAATDRPFGVNIPLMYPQIEEIM
AIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSRFAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRS
ATTLPLIAAGGIGTGEGIFAAMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV
ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVEAMQRAAEKKYW

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 33293; Mature: 33293

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAA
CCCHHHHHCCCCHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC
TDRPFGVNIPLMYPQIEEIMAIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSR
CCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCCEEEEEEECCCC
FAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRSATTLPLIAAGGIGTGEGIFA
CEEEHHHCCCCHHHHHCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH
AMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV
HHHHCCCCCEECEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVE
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AMQRAAEKKYW
HHHHHHHCCCC
>Mature Secondary Structure
MNRITSLFGIQYPIIQGGMVWCSGWRLASAVSNAGGLGLLGAGSMHPETLREHIRKCRAA
CCCHHHHHCCCCHHHCCCEEEECCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC
TDRPFGVNIPLMYPQIEEIMAIVAEEGVKIVFTSAGNPKAWTGWLHERGIIVAHVVSSSR
CCCCCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHHCCEEEEEEECCCC
FAMKCEEAGVDAVVAEGFEAGGHNGREETTTFCLIPAVRSATTLPLIAAGGIGTGEGIFA
CEEEHHHCCCCHHHHHCHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHH
AMVLGAEGVQIGTRFALTDESSASPVFKEYCLGLGEGDTKLLLKKLAPTRLVRNNFRDAV
HHHHCCCCCEECEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ERAEDGGASAEELRTLLGRGRAKKGIFEGDLEEGELEIGQVSAIVSRQQSVAEVMNELVE
HHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AMQRAAEKKYW
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]