Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346931

Identifier: 29346931

GI number: 29346931

Start: 1876252

End: 1877181

Strand: Reverse

Name: 29346931

Synonym: BT_1521

Alternate gene names: NA

Gene position: 1877181-1876252 (Counterclockwise)

Preceding gene: 29346932

Following gene: 29346923

Centisome position: 29.99

GC content: 46.02

Gene sequence:

>930_bases
ATGATATTCACTTTCGATATGGATTATCAGGAACTTTGGGCAAATTTGAAAAGGGCAGGAGTATATTTGCCTTTGGTATT
ATTGCTGTGGCTGTTCGTTTATCTGATTAATACTACATCGTGGTACATCATTATACGTAGCGGAGGGAAGCCGGGGTTTT
CATTTGCCCGGCTTTATAAGTTTACCGTTACGGGTTTTGCCCTGAATTACGTAACTCCCGTCGGACTGATGGGCGGTGAG
CCGTATCGCATCATGGAACTGAAACCGTATATAGGAGTGGAGAGAGCCACTTCTTCGGTGATTCTCTACGTGATGATGCA
CATCTTTTCTCATTTCTGCTTTTGGCTGAGTTCTGTCTTGCTATACCTTTGCCTTTATCCGGTAGGGTGGGTGATGGGAA
CCATTTTGGGTACGATCACCGTCTTCTGCCTGCTGGTAGCTATGTTGTTTGTAAAAGGCTATCAGCATGGGATGGCAGTT
GCTTTCGTTCGTCTGGGCAGTCATCTTCCTTTTCTGAAAAAGAAAGTAATCCGTTTTGCCGACTCCCATCGGGAACAGTT
GGAGAACATAGATAAACAGATAGCCTTGCTTCATCAACAGAAGAAGGGAGCTTTTTATGCGGCTTTATTCTTGGAATATA
CGGCACGTGTGGTCAGTTGTCTGGAAATCTGGCTGATCCTCAATGTGCTGACAAGGAGTGTCAGTTTTGCAGATTGCTGC
CTGATTGCTGCCTTCTCTTCTTTACTAGCCAATCTTTTGTTCTTCTTGCCTATGCAGTTGGGTGGCCGTGAGGGAGGATT
TGCCCTTGCGGTAGGCGGGCTTTCCCTTTCCGGAGCTTATGGAGTCTATGCGGCATTGATCACTCGCGTGCGTGAGATGG
TCTGGATTGTGATAGGGCTTGCTTTGATGAAGGTTGGAAATAAAAAGTAG

Upstream 100 bases:

>100_bases
GATTCAGAAACTTCTTTGACCGATATTATCAGTATATTAAATAGTGAAGAACAAATACCGCAATATATTCCTGGCTTTTG
GCATTGTCGCCGTCCTGATC

Downstream 100 bases:

>100_bases
CCTTATTTTACTATAATTTCCCAGTATCCGTTTTTATTTGATCCAACTCGCTGAATCATACCTTTTTGCTTTAATGATGT
GATCAGACGTTCGCTATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE
PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV
AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC
LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK

Sequences:

>Translated_309_residues
MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE
PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV
AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC
LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK
>Mature_309_residues
MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYKFTVTGFALNYVTPVGLMGGE
PYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVLLYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAV
AFVRLGSHLPFLKKKVIRFADSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC
LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGLALMKVGNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34805; Mature: 34805

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYK
CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
FTVTGFALNYVTPVGLMGGEPYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVL
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAVAFVRLGSHLPFLKKKVIRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALMKVGNKK
HHHHHCCCC
>Mature Secondary Structure
MIFTFDMDYQELWANLKRAGVYLPLVLLLWLFVYLINTTSWYIIIRSGGKPGFSFARLYK
CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
FTVTGFALNYVTPVGLMGGEPYRIMELKPYIGVERATSSVILYVMMHIFSHFCFWLSSVL
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLCLYPVGWVMGTILGTITVFCLLVAMLFVKGYQHGMAVAFVRLGSHLPFLKKKVIRFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
DSHREQLENIDKQIALLHQQKKGAFYAALFLEYTARVVSCLEIWLILNVLTRSVSFADCC
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LIAAFSSLLANLLFFLPMQLGGREGGFALAVGGLSLSGAYGVYAALITRVREMVWIVIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALMKVGNKK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA