| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346912
Identifier: 29346912
GI number: 29346912
Start: 1851682
End: 1854519
Strand: Reverse
Name: 29346912
Synonym: BT_1502
Alternate gene names: NA
Gene position: 1854519-1851682 (Counterclockwise)
Preceding gene: 29346913
Following gene: 29346911
Centisome position: 29.62
GC content: 39.89
Gene sequence:
>2838_bases ATGAACAAAAAGTTTTTAAATGCAGTCCTGTTTGGAGCGTTATTAGCGTCTTCGACGGGCACATTTACATCTTGTAAAGA CTACGATGACGACATCAATGGTCTGAGCGAACGTGTGGATGCAGTCGAAAAAACATTAGCTGACTTGAATACCAAGTTCG GAGCATTGGCTTATGTGAAATCGGTATCCTTTGCTAATGGTGTATTGACAGTAACAGATCAATCGGGGACTCCTACTACT TATACGATCCCTGATAACGATACGAATACTACGTACACTTTGGATGTATCTCAGGATGGTAATAAAGCTACTATTACTTT GACCGATGACAAAGGTAATAAACAGACTAAGACTATTACTTTTACAGATACTGACACTGATACCAAGTTTGATGCTACCA AATTGACTGTTGGTGAAGATGGCGTTGTAAAATATGACGGTGTTGCTACCGGGGTTACAATACCTAAGCAAGGTACGCTG ACTATCACAGAAATGACTACAGATGGCGTAACTTATGGCTGGGCTATTAAATATGGTAATGCAGAACCTGTTAATTTGAT GATCTGTGATGTGTTGCCTATTACAAGCTTTGGCTTCGAACCGGATGCTTATCTGGGAGGCGTTCCTTCAATGAAGGCTT TGAAAGTCGTTTACAAAGCTTGGGGTGAAACCACTAGCTGTAATCCGGCTACTGCTACTGGTGAAGTATGGGAAAAAGCT ACTACAAATTCTTATGTTCGTCCGGTTATTGCGGGTACTTATTATCTGAATCCGTCAAGTGCAACTAAAGAACAGATTAA GAAGATCACTGTACTTTCTGCAGATAAAGAGTATATTAATAAAACTAGAGCAGCTGCTTCTAATCCGGAAGTTGAAAGCT ATGAAGTAAAAGACGGTGTTTTGACTGTTTACTTCAAGGCTACTACTGAGTTGATTGAAGCTATCTCAAGTTCTAAGATT ACTGTTTTGGCTATCCGTGTAGAAACAGAAGCTGGTAATACAATTACTGATGAGTATAGAGCTATCTACGCAACAGATTA TGAAAACGTGATTTTGGGTGACAAGGCTAAAAAAGCTGCAGCTGCTGCACAACATCACTTGTATGGAACAACCTCTGGTA AGGCAGATGATGCTATCAAGGCTGACGCAGACTATGAAGTTGCTTATAACTCAACTACCGGTATCGATCTTGCTGACAAA GTTATCACTTGTTATGATGACGTGGCTGCTAATAAAACAGATTTGACTATGTCTGCTGCGGAACTGGCAAAATTAGGCTT GAAGTATGATTTCCATTTGTGTGCTTATATTGATGGTACTAATCAGACTAACCAAAGTGATTTCGCTAGATTGACAGGTT CGGTTTTGTATCCGAAATTGTTTAATGAAACAGCTACTCCGTATGCTGCCGTAGGTCGTCAGCCATTGGTACGTGTTCAG CTGTTGGATACGAAAGCTAATAATAAAGTGGTCAGCACAGGTTGGATTAAAGTGATGATCACTAAAGATAAGGCTCCTGC TATTGACGCTCCGTTCACATTTGATCCATTCACTAACCAATGTGATGATAAAGTATTCGCATTGACAGTTGAACAAATGA ATGTGAAGGTTTATAACAAGTTGGGTATGGACTATAAGATGTTCAAGACTATCTATGAAGCTGCCAATCCGTTGTATACC GGCGATGGTGTGGTTACTGAGGTTGCCGATGCTGGAGAAGTTACACAAACTGACTTGTTGAAGTGGACTATTTCTCAGGC CGATATGAAGTTAGCTTTGGCGAAGACTTCTGATGTTGGCTCATTGAAGGCTGTTGTAACTTACAAACCGAAAGCTGGTT ATGAAGATTCTTACAGCGATGTAACTATCACATTGTCTACTAAGGTTAATGCAATTGCCGCTGTTACAATTCCTGCTTCT AACAAGATCGCTGAATACTGGGATGCTAATAAGACTTACGTTCGTCTGAATGTAGTTGTTCCGGGTACTCTGACTGATGA CTGTGCATTTGCAGTTGACTTGGATAACACATTTGAAGGAAACAAACCTATTATCACAGGTGCTACTGCTTACAAGTATA TTTTTGCATCTAAGAACGTAAATCGTAAAGAGAAAGGTTTGAGCGGTACTGAATATACATTATCAGTTAGTGATGATGGC TTGACATTGAAAGCTACTGCCGGTGCTGCGACTCAAAATGTAGCAGTGATTGATGCTGATGGTGTAGTCACTTATCAAAA TACAGACTTTGCAAAAGACCTGTTGAATATTGCAAGTCACAACTCAGTTCCATCTGCCGGATTCTATGCTTGGATTAACA TTAAAGCAACTACCGGTGAATGTGCATTAGAGTTGCCTATCACTAACGGTGAATATATGGCTTACTTCTTGCGTCCGATT GATGTAATTGCCGGTGAAGGTAAGTTCCAAGATGCTGTTGATAATGGTTCTACAGTTAATATGCTCGACCTGTTGAGCTT CTCTGATTGGAGAAACCAAGCATTCAGCACAACAGTAAAAGCTAACTACTTCGGTTATTATGGAATCGAGCTAATTACAG TTGATATACCTAATATTACTACTGACTTGAATGGTAACGATATCAATTCTAAGAAGTTGTCTGAGGTTACTTCACAACTG GTAATTACTCAAACTGGTACTACGGTTAATCCTATTCCTGCAGCTCCTGCTAAGGATACTTATGGTACCGTTACATATAC AAACAATGGTAACGCTGTCGGTGCATTCAACTTGAGATTACCTGTTACTGTCACTTACAAGTGGGGTACAGTTAAGTCTT ATGTGATTATCCCGGTTGAAAAGACATTAGGTAACTAA
Upstream 100 bases:
>100_bases TTACACTAAAAATGAATGGGGACAACACATGGGATTATTGAATCGACATCGAGAGATTATATTTTTATTATTTAATTTAT AAATTAAAAGTTTTTTTATT
Downstream 100 bases:
>100_bases TTCTTTTTGAACTTAAATATAATGAAGCGCTTCTCTCTAATGAGAGGCGCTTTATGTTTAATGTAAATTAATCAATTATG AGCATTAGAAGAAAACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 945; Mature: 945
Protein sequence:
>945_residues MNKKFLNAVLFGALLASSTGTFTSCKDYDDDINGLSERVDAVEKTLADLNTKFGALAYVKSVSFANGVLTVTDQSGTPTT YTIPDNDTNTTYTLDVSQDGNKATITLTDDKGNKQTKTITFTDTDTDTKFDATKLTVGEDGVVKYDGVATGVTIPKQGTL TITEMTTDGVTYGWAIKYGNAEPVNLMICDVLPITSFGFEPDAYLGGVPSMKALKVVYKAWGETTSCNPATATGEVWEKA TTNSYVRPVIAGTYYLNPSSATKEQIKKITVLSADKEYINKTRAAASNPEVESYEVKDGVLTVYFKATTELIEAISSSKI TVLAIRVETEAGNTITDEYRAIYATDYENVILGDKAKKAAAAAQHHLYGTTSGKADDAIKADADYEVAYNSTTGIDLADK VITCYDDVAANKTDLTMSAAELAKLGLKYDFHLCAYIDGTNQTNQSDFARLTGSVLYPKLFNETATPYAAVGRQPLVRVQ LLDTKANNKVVSTGWIKVMITKDKAPAIDAPFTFDPFTNQCDDKVFALTVEQMNVKVYNKLGMDYKMFKTIYEAANPLYT GDGVVTEVADAGEVTQTDLLKWTISQADMKLALAKTSDVGSLKAVVTYKPKAGYEDSYSDVTITLSTKVNAIAAVTIPAS NKIAEYWDANKTYVRLNVVVPGTLTDDCAFAVDLDNTFEGNKPIITGATAYKYIFASKNVNRKEKGLSGTEYTLSVSDDG LTLKATAGAATQNVAVIDADGVVTYQNTDFAKDLLNIASHNSVPSAGFYAWINIKATTGECALELPITNGEYMAYFLRPI DVIAGEGKFQDAVDNGSTVNMLDLLSFSDWRNQAFSTTVKANYFGYYGIELITVDIPNITTDLNGNDINSKKLSEVTSQL VITQTGTTVNPIPAAPAKDTYGTVTYTNNGNAVGAFNLRLPVTVTYKWGTVKSYVIIPVEKTLGN
Sequences:
>Translated_945_residues MNKKFLNAVLFGALLASSTGTFTSCKDYDDDINGLSERVDAVEKTLADLNTKFGALAYVKSVSFANGVLTVTDQSGTPTT YTIPDNDTNTTYTLDVSQDGNKATITLTDDKGNKQTKTITFTDTDTDTKFDATKLTVGEDGVVKYDGVATGVTIPKQGTL TITEMTTDGVTYGWAIKYGNAEPVNLMICDVLPITSFGFEPDAYLGGVPSMKALKVVYKAWGETTSCNPATATGEVWEKA TTNSYVRPVIAGTYYLNPSSATKEQIKKITVLSADKEYINKTRAAASNPEVESYEVKDGVLTVYFKATTELIEAISSSKI TVLAIRVETEAGNTITDEYRAIYATDYENVILGDKAKKAAAAAQHHLYGTTSGKADDAIKADADYEVAYNSTTGIDLADK VITCYDDVAANKTDLTMSAAELAKLGLKYDFHLCAYIDGTNQTNQSDFARLTGSVLYPKLFNETATPYAAVGRQPLVRVQ LLDTKANNKVVSTGWIKVMITKDKAPAIDAPFTFDPFTNQCDDKVFALTVEQMNVKVYNKLGMDYKMFKTIYEAANPLYT GDGVVTEVADAGEVTQTDLLKWTISQADMKLALAKTSDVGSLKAVVTYKPKAGYEDSYSDVTITLSTKVNAIAAVTIPAS NKIAEYWDANKTYVRLNVVVPGTLTDDCAFAVDLDNTFEGNKPIITGATAYKYIFASKNVNRKEKGLSGTEYTLSVSDDG LTLKATAGAATQNVAVIDADGVVTYQNTDFAKDLLNIASHNSVPSAGFYAWINIKATTGECALELPITNGEYMAYFLRPI DVIAGEGKFQDAVDNGSTVNMLDLLSFSDWRNQAFSTTVKANYFGYYGIELITVDIPNITTDLNGNDINSKKLSEVTSQL VITQTGTTVNPIPAAPAKDTYGTVTYTNNGNAVGAFNLRLPVTVTYKWGTVKSYVIIPVEKTLGN >Mature_945_residues MNKKFLNAVLFGALLASSTGTFTSCKDYDDDINGLSERVDAVEKTLADLNTKFGALAYVKSVSFANGVLTVTDQSGTPTT YTIPDNDTNTTYTLDVSQDGNKATITLTDDKGNKQTKTITFTDTDTDTKFDATKLTVGEDGVVKYDGVATGVTIPKQGTL TITEMTTDGVTYGWAIKYGNAEPVNLMICDVLPITSFGFEPDAYLGGVPSMKALKVVYKAWGETTSCNPATATGEVWEKA TTNSYVRPVIAGTYYLNPSSATKEQIKKITVLSADKEYINKTRAAASNPEVESYEVKDGVLTVYFKATTELIEAISSSKI TVLAIRVETEAGNTITDEYRAIYATDYENVILGDKAKKAAAAAQHHLYGTTSGKADDAIKADADYEVAYNSTTGIDLADK VITCYDDVAANKTDLTMSAAELAKLGLKYDFHLCAYIDGTNQTNQSDFARLTGSVLYPKLFNETATPYAAVGRQPLVRVQ LLDTKANNKVVSTGWIKVMITKDKAPAIDAPFTFDPFTNQCDDKVFALTVEQMNVKVYNKLGMDYKMFKTIYEAANPLYT GDGVVTEVADAGEVTQTDLLKWTISQADMKLALAKTSDVGSLKAVVTYKPKAGYEDSYSDVTITLSTKVNAIAAVTIPAS NKIAEYWDANKTYVRLNVVVPGTLTDDCAFAVDLDNTFEGNKPIITGATAYKYIFASKNVNRKEKGLSGTEYTLSVSDDG LTLKATAGAATQNVAVIDADGVVTYQNTDFAKDLLNIASHNSVPSAGFYAWINIKATTGECALELPITNGEYMAYFLRPI DVIAGEGKFQDAVDNGSTVNMLDLLSFSDWRNQAFSTTVKANYFGYYGIELITVDIPNITTDLNGNDINSKKLSEVTSQL VITQTGTTVNPIPAAPAKDTYGTVTYTNNGNAVGAFNLRLPVTVTYKWGTVKSYVIIPVEKTLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102031; Mature: 102031
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKFLNAVLFGALLASSTGTFTSCKDYDDDINGLSERVDAVEKTLADLNTKFGALAYVK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEHHH SVSFANGVLTVTDQSGTPTTYTIPDNDTNTTYTLDVSQDGNKATITLTDDKGNKQTKTIT HHHCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEE FTDTDTDTKFDATKLTVGEDGVVKYDGVATGVTIPKQGTLTITEMTTDGVTYGWAIKYGN EECCCCCCEECEEEEEECCCCEEEECCEEECEEECCCCCEEEEEEECCCEEEEEEEEECC AEPVNLMICDVLPITSFGFEPDAYLGGVPSMKALKVVYKAWGETTSCNPATATGEVWEKA CCCEEEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC TTNSYVRPVIAGTYYLNPSSATKEQIKKITVLSADKEYINKTRAAASNPEVESYEVKDGV CCCCCCCEEEEEEEEECCCCHHHHHHHEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCE LTVYFKATTELIEAISSSKITVLAIRVETEAGNTITDEYRAIYATDYENVILGDKAKKAA EEEEEEHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCEEEEEECCCCEEECCCHHHHH AAAQHHLYGTTSGKADDAIKADADYEVAYNSTTGIDLADKVITCYDDVAANKTDLTMSAA HHHHHHEEECCCCCCCCCEECCCCEEEEECCCCCCCHHHHEEEEHHHHCCCCCCEEECHH ELAKLGLKYDFHLCAYIDGTNQTNQSDFARLTGSVLYPKLFNETATPYAAVGRQPLVRVQ HHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHCCEECHHHHCCCCCCHHHCCCCCEEEEE LLDTKANNKVVSTGWIKVMITKDKAPAIDAPFTFDPFTNQCDDKVFALTVEQMNVKVYNK EEECCCCCEEEEECEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCEEEEEC LGMDYKMFKTIYEAANPLYTGDGVVTEVADAGEVTQTDLLKWTISQADMKLALAKTSDVG CCCCHHHHHHHHHHCCCEECCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEEEECCCCC SLKAVVTYKPKAGYEDSYSDVTITLSTKVNAIAAVTIPASNKIAEYWDANKTYVRLNVVV CEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHCCCCEEEEEEEEE PGTLTDDCAFAVDLDNTFEGNKPIITGATAYKYIFASKNVNRKEKGLSGTEYTLSVSDDG CCCCCCCEEEEEECCCCCCCCCCEEECCCEEEEEEECCCCCHHHCCCCCCEEEEEECCCC LTLKATAGAATQNVAVIDADGVVTYQNTDFAKDLLNIASHNSVPSAGFYAWINIKATTGE EEEEEECCCCCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCC CALELPITNGEYMAYFLRPIDVIAGEGKFQDAVDNGSTVNMLDLLSFSDWRNQAFSTTVK EEEEEECCCCCEEEEEEEEEEEEECCCCCHHHCCCCCEEEEEEHHHCCHHHCCCEEEEEE ANYFGYYGIELITVDIPNITTDLNGNDINSKKLSEVTSQLVITQTGTTVNPIPAAPAKDT EEEEEEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC YGTVTYTNNGNAVGAFNLRLPVTVTYKWGTVKSYVIIPVEKTLGN CEEEEECCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEHHHCCC >Mature Secondary Structure MNKKFLNAVLFGALLASSTGTFTSCKDYDDDINGLSERVDAVEKTLADLNTKFGALAYVK CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHEEHHH SVSFANGVLTVTDQSGTPTTYTIPDNDTNTTYTLDVSQDGNKATITLTDDKGNKQTKTIT HHHCCCCEEEEECCCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEE FTDTDTDTKFDATKLTVGEDGVVKYDGVATGVTIPKQGTLTITEMTTDGVTYGWAIKYGN EECCCCCCEECEEEEEECCCCEEEECCEEECEEECCCCCEEEEEEECCCEEEEEEEEECC AEPVNLMICDVLPITSFGFEPDAYLGGVPSMKALKVVYKAWGETTSCNPATATGEVWEKA CCCEEEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC TTNSYVRPVIAGTYYLNPSSATKEQIKKITVLSADKEYINKTRAAASNPEVESYEVKDGV CCCCCCCEEEEEEEEECCCCHHHHHHHEEEEEECCHHHHHHHHCCCCCCCCCEEEECCCE LTVYFKATTELIEAISSSKITVLAIRVETEAGNTITDEYRAIYATDYENVILGDKAKKAA EEEEEEHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCEEEEEECCCCEEECCCHHHHH AAAQHHLYGTTSGKADDAIKADADYEVAYNSTTGIDLADKVITCYDDVAANKTDLTMSAA HHHHHHEEECCCCCCCCCEECCCCEEEEECCCCCCCHHHHEEEEHHHHCCCCCCEEECHH ELAKLGLKYDFHLCAYIDGTNQTNQSDFARLTGSVLYPKLFNETATPYAAVGRQPLVRVQ HHHHHCCEEEEEEEEEEECCCCCCCHHHHHHHCCEECHHHHCCCCCCHHHCCCCCEEEEE LLDTKANNKVVSTGWIKVMITKDKAPAIDAPFTFDPFTNQCDDKVFALTVEQMNVKVYNK EEECCCCCEEEEECEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEEECCCEEEEEC LGMDYKMFKTIYEAANPLYTGDGVVTEVADAGEVTQTDLLKWTISQADMKLALAKTSDVG CCCCHHHHHHHHHHCCCEECCCCCEEEECCCCCCCHHHHEEEEECCCCEEEEEEECCCCC SLKAVVTYKPKAGYEDSYSDVTITLSTKVNAIAAVTIPASNKIAEYWDANKTYVRLNVVV CEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHCCCCEEEEEEEEE PGTLTDDCAFAVDLDNTFEGNKPIITGATAYKYIFASKNVNRKEKGLSGTEYTLSVSDDG CCCCCCCEEEEEECCCCCCCCCCEEECCCEEEEEEECCCCCHHHCCCCCCEEEEEECCCC LTLKATAGAATQNVAVIDADGVVTYQNTDFAKDLLNIASHNSVPSAGFYAWINIKATTGE EEEEEECCCCCCCEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCC CALELPITNGEYMAYFLRPIDVIAGEGKFQDAVDNGSTVNMLDLLSFSDWRNQAFSTTVK EEEEEECCCCCEEEEEEEEEEEEECCCCCHHHCCCCCEEEEEEHHHCCHHHCCCEEEEEE ANYFGYYGIELITVDIPNITTDLNGNDINSKKLSEVTSQLVITQTGTTVNPIPAAPAKDT EEEEEEEEEEEEEEECCCEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCC YGTVTYTNNGNAVGAFNLRLPVTVTYKWGTVKSYVIIPVEKTLGN CEEEEECCCCCEEEEEEEEEEEEEEEECCCEEEEEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA