Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is ybjZ [C]

Identifier: 29346875

GI number: 29346875

Start: 1804059

End: 1806479

Strand: Reverse

Name: ybjZ [C]

Synonym: BT_1465

Alternate gene names: 29346875

Gene position: 1806479-1804059 (Counterclockwise)

Preceding gene: 29346876

Following gene: 29346873

Centisome position: 28.86

GC content: 45.35

Gene sequence:

>2421_bases
ATGATAGGAAATTATTGGAATAGTGCCTATCGGAATCTGATGAAGCGGAAGAAGTTCAGCTTCATTAATGTGTTTGGACT
GGCGATCGGCATGGCATCGGCGTTACTGATTCTGACGTATGTAACTTTTGAGTTCAGTTTTGACAAGATGCACACGAAAT
ATCCCCATATTTACCGTGTGCAAAGTACATTCCGCGAAGGGGAGGTGCTGACCGATAACTGGGCAAGCAGCTCTTTCGGA
TACGGCTCGGCAATGAAAGAGAATCTTGCGGGAATTGAAGATTATACCCGAATCGGCTCTCTGCTCCAACCTGAACAGAT
TGTGAAGTATGGTGAGTTGACACTGCGGGAAAACCAGATAGCTTATGCCGATCCGGGCTTTTTCCGTCTTTTCGATTTCG
AGCTTTTGAAAGGTGATAAAAAGACCAGCCTTTCGATGCCGGGACAAGTCGTAATCACCGAGCGCATTGCCCGCAAATAT
TTCAAAGAGGAAGACCCTATCGGAAAGATTCTTATCTTTACCGGTCCCTATTATAAGATATCGTGTGAAGTGACCGGAGT
CATGGAGGAAATGCCTTCCAATTCCCATATACATTATAACTTCCTGATTTCGTATACATCTCTGCCCAAGTTTATACATG
AATACTGGTATAAGCATGAAGCATATACGTATGTTCTGCTCGATTCGCCGGAGAGGGAAGCGGAAATAGAAAGAGAGTTT
CCCGTCATGGCGGAAAAGTACAAGACGGAGGAAGCGTTGAAAAACAAAACATGGGGAGTCGATTTGGTTCCTCTGGCAGA
TATACATCTCACTCCGCAATTGGGTTATGAAATGGAGACAAAAGGAAATCGTTCTGCCATGATTGCACTTGTCTTTGCAG
CCATTGCCATTCTGGCTATTGCCTGGATAAACTATATCAATCTGACAGTAGCCCGTTCGATGGAGCGTGCCAGGGAAGTC
GGAGTGCGTCGGGTAGTGGGTGCTTTCCGCAAGCAGTTGATTCATCAGTTCCTGTTCGAAGCGCTGGTTATGAATCTGAT
TGCTTTTATATTGGCGGTAGGACTGATAGAGCTGATTCTTCCGTACTTTAATCAACTGGTGGGACGTACGGTCACTTTCT
CCGTTTGGCTGATGGATTATTGGTGGATGCTGCTGGTTCTTGTTTTTATCGCAGGGATATTCCTTTCCGGATATTATCCG
GCATTGGCTTTGCTGAACCGTAAACCGATTACCCTGTTGAAAGGAAAGTTTTTGCATAGCAAGTCCGGAGAACGGACTCG
TCAGGTGTTGGTTATCATTCAATATACGGCCTCTATGATACTGCTTTGTGGAACATTGATCGTGTTTGCACAGCTGAATT
TTATGCGCAGCCAATCATTAGGGGTGAAAACCGACCAGACATTAGTCATTAAATTTCCCGGACGTACAGACGGGCTGAAT
GTGAAGCTGGAAGCGATGAAGAAAGCGATAATGCGGTTGCCACTGGTGCATAGTGTCGCAGCTTCCGGTGCTGTGCCGGG
CGAGGAGGTGGCTACTTTCCTTTCCAATCGCCGTACCAATGACGCTTTGAAGCAGAATCGGCTTTATGAGATGCTGGCCT
GCGATCCGGATTATATAGAGGCATATGGTTTGCAAGTGATAGCCGGACGGGGCTTTTCAGAAGAGTACGGAGACGATGTA
GATAAACTGGTGATTAATGAGACGGCCGTACGCAATCTGGGCTTTGCTTCCAATGATGAGGCGATAGGAGAGTTGGTAAC
AGTAGAATGTACCGATGCTCCGATGCAGATTATCGGAGTGGTCAAAGATTATCATCAGCAGGCGTTGAGTAAGAATTATA
CTCCTATTATGCTGATTCATAAAGATAAGATAGACTGGTTGCCACAACGCTATATTTCTATCGTAATGACTTCCGGCAAT
CCCCGCGAACTGGTATCGCAGGTACAGGAAATATGGAATCGGTACTTTGCTGATTCCAGTTTCGATTATTTTTTCCTCGA
TCAGTTCTTCGACCATCAGTATCGTCAGGATGAAGTATTCGGGGTGATGATAGGTTCTTTCACCGGATTAGCGATATTCA
TATCCTGTCTGGGACTTTGGGTATTGGTGATGTTTTCCTGTTCCACCCGTACGAAAGAGATGGGTATACGTAAAGTCTTG
GGAGCTTCCCGCTGGAATCTTTTCTATCAGTTGGTCAAAGGATTTTTCCTGCTGATTCTGATAGCGGTTGTGATTGCTCT
TCCGGTAGCCTGGTTCAGTATGAACGCCTGGTTGAGTCATTATGCTTTCCGGACGGATTTAGAAGCCTGGTTCTTTATTG
TGCCCGTATTGTTGATGTTGTTCATTTCATTCGTGACGGTGGCCTTTCAGACAATGAAAATAATAATGAGCAAACCTGCT
CGTTCGTTAAGATATGAATAG

Upstream 100 bases:

>100_bases
CGTATGCGCATCGGATTATCCGGTTGTTGGACGGACAGATTGTATCCGAAAACATCAACCGTCCGTTAGAAAAAAGTACG
TCCTCTAAAAACGAAGCTGT

Downstream 100 bases:

>100_bases
TTTTTAGATCACTCCTTCGGGTATTCGTTAATATCCGGAGGAATTATGTTAAATGTTAACGAGTCTGCTACTTCTATTAA
ACCATGTTATAAGATGCTCC

Product: putative ABC transporter permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 806; Mature: 806

Protein sequence:

>806_residues
MIGNYWNSAYRNLMKRKKFSFINVFGLAIGMASALLILTYVTFEFSFDKMHTKYPHIYRVQSTFREGEVLTDNWASSSFG
YGSAMKENLAGIEDYTRIGSLLQPEQIVKYGELTLRENQIAYADPGFFRLFDFELLKGDKKTSLSMPGQVVITERIARKY
FKEEDPIGKILIFTGPYYKISCEVTGVMEEMPSNSHIHYNFLISYTSLPKFIHEYWYKHEAYTYVLLDSPEREAEIEREF
PVMAEKYKTEEALKNKTWGVDLVPLADIHLTPQLGYEMETKGNRSAMIALVFAAIAILAIAWINYINLTVARSMERAREV
GVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELILPYFNQLVGRTVTFSVWLMDYWWMLLVLVFIAGIFLSGYYP
ALALLNRKPITLLKGKFLHSKSGERTRQVLVIIQYTASMILLCGTLIVFAQLNFMRSQSLGVKTDQTLVIKFPGRTDGLN
VKLEAMKKAIMRLPLVHSVAASGAVPGEEVATFLSNRRTNDALKQNRLYEMLACDPDYIEAYGLQVIAGRGFSEEYGDDV
DKLVINETAVRNLGFASNDEAIGELVTVECTDAPMQIIGVVKDYHQQALSKNYTPIMLIHKDKIDWLPQRYISIVMTSGN
PRELVSQVQEIWNRYFADSSFDYFFLDQFFDHQYRQDEVFGVMIGSFTGLAIFISCLGLWVLVMFSCSTRTKEMGIRKVL
GASRWNLFYQLVKGFFLLILIAVVIALPVAWFSMNAWLSHYAFRTDLEAWFFIVPVLLMLFISFVTVAFQTMKIIMSKPA
RSLRYE

Sequences:

>Translated_806_residues
MIGNYWNSAYRNLMKRKKFSFINVFGLAIGMASALLILTYVTFEFSFDKMHTKYPHIYRVQSTFREGEVLTDNWASSSFG
YGSAMKENLAGIEDYTRIGSLLQPEQIVKYGELTLRENQIAYADPGFFRLFDFELLKGDKKTSLSMPGQVVITERIARKY
FKEEDPIGKILIFTGPYYKISCEVTGVMEEMPSNSHIHYNFLISYTSLPKFIHEYWYKHEAYTYVLLDSPEREAEIEREF
PVMAEKYKTEEALKNKTWGVDLVPLADIHLTPQLGYEMETKGNRSAMIALVFAAIAILAIAWINYINLTVARSMERAREV
GVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELILPYFNQLVGRTVTFSVWLMDYWWMLLVLVFIAGIFLSGYYP
ALALLNRKPITLLKGKFLHSKSGERTRQVLVIIQYTASMILLCGTLIVFAQLNFMRSQSLGVKTDQTLVIKFPGRTDGLN
VKLEAMKKAIMRLPLVHSVAASGAVPGEEVATFLSNRRTNDALKQNRLYEMLACDPDYIEAYGLQVIAGRGFSEEYGDDV
DKLVINETAVRNLGFASNDEAIGELVTVECTDAPMQIIGVVKDYHQQALSKNYTPIMLIHKDKIDWLPQRYISIVMTSGN
PRELVSQVQEIWNRYFADSSFDYFFLDQFFDHQYRQDEVFGVMIGSFTGLAIFISCLGLWVLVMFSCSTRTKEMGIRKVL
GASRWNLFYQLVKGFFLLILIAVVIALPVAWFSMNAWLSHYAFRTDLEAWFFIVPVLLMLFISFVTVAFQTMKIIMSKPA
RSLRYE
>Mature_806_residues
MIGNYWNSAYRNLMKRKKFSFINVFGLAIGMASALLILTYVTFEFSFDKMHTKYPHIYRVQSTFREGEVLTDNWASSSFG
YGSAMKENLAGIEDYTRIGSLLQPEQIVKYGELTLRENQIAYADPGFFRLFDFELLKGDKKTSLSMPGQVVITERIARKY
FKEEDPIGKILIFTGPYYKISCEVTGVMEEMPSNSHIHYNFLISYTSLPKFIHEYWYKHEAYTYVLLDSPEREAEIEREF
PVMAEKYKTEEALKNKTWGVDLVPLADIHLTPQLGYEMETKGNRSAMIALVFAAIAILAIAWINYINLTVARSMERAREV
GVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELILPYFNQLVGRTVTFSVWLMDYWWMLLVLVFIAGIFLSGYYP
ALALLNRKPITLLKGKFLHSKSGERTRQVLVIIQYTASMILLCGTLIVFAQLNFMRSQSLGVKTDQTLVIKFPGRTDGLN
VKLEAMKKAIMRLPLVHSVAASGAVPGEEVATFLSNRRTNDALKQNRLYEMLACDPDYIEAYGLQVIAGRGFSEEYGDDV
DKLVINETAVRNLGFASNDEAIGELVTVECTDAPMQIIGVVKDYHQQALSKNYTPIMLIHKDKIDWLPQRYISIVMTSGN
PRELVSQVQEIWNRYFADSSFDYFFLDQFFDHQYRQDEVFGVMIGSFTGLAIFISCLGLWVLVMFSCSTRTKEMGIRKVL
GASRWNLFYQLVKGFFLLILIAVVIALPVAWFSMNAWLSHYAFRTDLEAWFFIVPVLLMLFISFVTVAFQTMKIIMSKPA
RSLRYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92402; Mature: 92402

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGNYWNSAYRNLMKRKKFSFINVFGLAIGMASALLILTYVTFEFSFDKMHTKYPHIYRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCEEEE
QSTFREGEVLTDNWASSSFGYGSAMKENLAGIEDYTRIGSLLQPEQIVKYGELTLRENQI
HHHHCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEECCEE
AYADPGFFRLFDFELLKGDKKTSLSMPGQVVITERIARKYFKEEDPIGKILIFTGPYYKI
EECCCCCEEEEHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCEEE
SCEVTGVMEEMPSNSHIHYNFLISYTSLPKFIHEYWYKHEAYTYVLLDSPEREAEIEREF
EEEEEHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCC
PVMAEKYKTEEALKNKTWGVDLVPLADIHLTPQLGYEMETKGNRSAMIALVFAAIAILAI
CHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHH
AWINYINLTVARSMERAREVGVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYFNQLVGRTVTFSVWLMDYWWMLLVLVFIAGIFLSGYYPALALLNRKPITLLKGKFLHS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHCCCHHCC
KSGERTRQVLVIIQYTASMILLCGTLIVFAQLNFMRSQSLGVKTDQTLVIKFPGRTDGLN
CCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC
VKLEAMKKAIMRLPLVHSVAASGAVPGEEVATFLSNRRTNDALKQNRLYEMLACDPDYIE
EEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
AYGLQVIAGRGFSEEYGDDVDKLVINETAVRNLGFASNDEAIGELVTVECTDAPMQIIGV
HHCEEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
VKDYHQQALSKNYTPIMLIHKDKIDWLPQRYISIVMTSGNPRELVSQVQEIWNRYFADSS
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCC
FDYFFLDQFFDHQYRQDEVFGVMIGSFTGLAIFISCLGLWVLVMFSCSTRTKEMGIRKVL
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GASRWNLFYQLVKGFFLLILIAVVIALPVAWFSMNAWLSHYAFRTDLEAWFFIVPVLLML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISFVTVAFQTMKIIMSKPARSLRYE
HHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MIGNYWNSAYRNLMKRKKFSFINVFGLAIGMASALLILTYVTFEFSFDKMHTKYPHIYRV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCCCEEEE
QSTFREGEVLTDNWASSSFGYGSAMKENLAGIEDYTRIGSLLQPEQIVKYGELTLRENQI
HHHHCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCEEEECCEE
AYADPGFFRLFDFELLKGDKKTSLSMPGQVVITERIARKYFKEEDPIGKILIFTGPYYKI
EECCCCCEEEEHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCEEE
SCEVTGVMEEMPSNSHIHYNFLISYTSLPKFIHEYWYKHEAYTYVLLDSPEREAEIEREF
EEEEEHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCC
PVMAEKYKTEEALKNKTWGVDLVPLADIHLTPQLGYEMETKGNRSAMIALVFAAIAILAI
CHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHH
AWINYINLTVARSMERAREVGVRRVVGAFRKQLIHQFLFEALVMNLIAFILAVGLIELIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PYFNQLVGRTVTFSVWLMDYWWMLLVLVFIAGIFLSGYYPALALLNRKPITLLKGKFLHS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHCCCHHCC
KSGERTRQVLVIIQYTASMILLCGTLIVFAQLNFMRSQSLGVKTDQTLVIKFPGRTDGLN
CCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC
VKLEAMKKAIMRLPLVHSVAASGAVPGEEVATFLSNRRTNDALKQNRLYEMLACDPDYIE
EEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
AYGLQVIAGRGFSEEYGDDVDKLVINETAVRNLGFASNDEAIGELVTVECTDAPMQIIGV
HHCEEEEECCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHH
VKDYHQQALSKNYTPIMLIHKDKIDWLPQRYISIVMTSGNPRELVSQVQEIWNRYFADSS
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCC
FDYFFLDQFFDHQYRQDEVFGVMIGSFTGLAIFISCLGLWVLVMFSCSTRTKEMGIRKVL
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
GASRWNLFYQLVKGFFLLILIAVVIALPVAWFSMNAWLSHYAFRTDLEAWFFIVPVLLML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISFVTVAFQTMKIIMSKPARSLRYE
HHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA