| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346822
Identifier: 29346822
GI number: 29346822
Start: 1745411
End: 1745950
Strand: Reverse
Name: 29346822
Synonym: BT_1412
Alternate gene names: NA
Gene position: 1745950-1745411 (Counterclockwise)
Preceding gene: 29346824
Following gene: 29346820
Centisome position: 27.89
GC content: 41.48
Gene sequence:
>540_bases ATGGCTAAAAAAGTTCTGATTATTTCGTCCAGCCCCCGAAAGGGCGGTAATTCTGATATGCTTTGTGACGAATTTATGAA AGGTGTTCTCGAAACAGGCAATGAAGTAGAAAAGATTTTTCTGAAAGAGAAAGTAATTCATCCTTGTACGGGATGTAGTG TTTGCAGCATGTATGGCAAACCCTGCCCCCAGAAAGATGATGCCGCAGGAATTGTAGAGAAAATGATTGCTGCTGATGTC ATCGTAATGGCAACACCTGTTTATTTCTATACGATGTGCGGACAGATGAAGATTATGATTGACCGTTGTTGTGCGCGTTA TACGGAAATAACGAATAAGGAATTTTATTTCATTATTGCAGCGGCGGAGAATGATAAGGGGATGATGGAACGTACGATTG ATGGTTTCCGTGGCTTCCTTGATTGTCTGGAAAATCCGCAGGAAAAAGGAGTGATTTATGGAATAGGTGCCTGGAAGGTA GGAGAAATAAAAGATACTCCCTACATGCAGGAAGCCTATGAGATGGGAAAAATGGTGTAA
Upstream 100 bases:
>100_bases ATCTCTGTAATTTATCTACATTTGCTATATGATAAATTGTCTATTTTTGCAGAGTGAAAAAGCTGATTAATGAAATTCAA AAAATAAAAGTAATAAAGTT
Downstream 100 bases:
>100_bases ACGTTCGCTTTAGGTAAACATTTCCCGTCTTATATAACAACCTTTCAGGATGGTGTCACTATGCTGAGTATATAGTGACG CTATACCTGTAGGATAGTGA
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAKKVLIISSSPRKGGNSDMLCDEFMKGVLETGNEVEKIFLKEKVIHPCTGCSVCSMYGKPCPQKDDAAGIVEKMIAADV IVMATPVYFYTMCGQMKIMIDRCCARYTEITNKEFYFIIAAAENDKGMMERTIDGFRGFLDCLENPQEKGVIYGIGAWKV GEIKDTPYMQEAYEMGKMV
Sequences:
>Translated_179_residues MAKKVLIISSSPRKGGNSDMLCDEFMKGVLETGNEVEKIFLKEKVIHPCTGCSVCSMYGKPCPQKDDAAGIVEKMIAADV IVMATPVYFYTMCGQMKIMIDRCCARYTEITNKEFYFIIAAAENDKGMMERTIDGFRGFLDCLENPQEKGVIYGIGAWKV GEIKDTPYMQEAYEMGKMV >Mature_178_residues AKKVLIISSSPRKGGNSDMLCDEFMKGVLETGNEVEKIFLKEKVIHPCTGCSVCSMYGKPCPQKDDAAGIVEKMIAADVI VMATPVYFYTMCGQMKIMIDRCCARYTEITNKEFYFIIAAAENDKGMMERTIDGFRGFLDCLENPQEKGVIYGIGAWKVG EIKDTPYMQEAYEMGKMV
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20029; Mature: 19898
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 12.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 12.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKVLIISSSPRKGGNSDMLCDEFMKGVLETGNEVEKIFLKEKVIHPCTGCSVCSMYGK CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCC PCPQKDDAAGIVEKMIAADVIVMATPVYFYTMCGQMKIMIDRCCARYTEITNKEFYFIIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEE AAENDKGMMERTIDGFRGFLDCLENPQEKGVIYGIGAWKVGEIKDTPYMQEAYEMGKMV ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCHHHHHHHHCCCC >Mature Secondary Structure AKKVLIISSSPRKGGNSDMLCDEFMKGVLETGNEVEKIFLKEKVIHPCTGCSVCSMYGK CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHCCC PCPQKDDAAGIVEKMIAADVIVMATPVYFYTMCGQMKIMIDRCCARYTEITNKEFYFIIA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEE AAENDKGMMERTIDGFRGFLDCLENPQEKGVIYGIGAWKVGEIKDTPYMQEAYEMGKMV ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]