Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346820

Identifier: 29346820

GI number: 29346820

Start: 1743635

End: 1744456

Strand: Reverse

Name: 29346820

Synonym: BT_1410

Alternate gene names: NA

Gene position: 1744456-1743635 (Counterclockwise)

Preceding gene: 29346822

Following gene: 29346819

Centisome position: 27.87

GC content: 38.56

Gene sequence:

>822_bases
ATGAACTATAAAATAACGACTCTTGTCGAAAATTGTGTCTATGGACGTAAATTGCAGGCAGAACATGGTCTTTCCCTCTA
TATTGAGACACCGGAAAACAGATTACTTTTTGATACGGGAGCTTCCGATTTATTTATCCGTAACGCCCGGTTATTGAATA
TTGACTTGCAAAAAGTAGATTATTTAGTATTATCTCATGGTCACAGTGACCATACGGGTGGACTACGCCATTTTCTTGAA
CTAAATGCCGAAGCAACGGTTGTCTGCAAACGCGAAGTGTTTTTTTCTAAATTCAAGGATGAACGTGAGAATGGAATGAA
ATATACACGCTCGCTTGATCTTTCTCGTTTTCGTTTTATTGATGAGTTGACTGAACTGGTTCCCGGAGTATTTCTTTTTC
CCTCTGTGGATATTATAGACCCGAAGGATACACATTTTGAACGATTTTGGATTCAAAAGGAAGATGGTTCTAGAGTCCCC
GATACCTTTCCGGACGAGTTAGCTATGGTACTGGTTGAGCCTGAAGGACTTTCCATTTTAAGTGCCTGTTCCCACCGGGG
TATTACAAATATATTGCGGACTGTAAGAACGGCATTTCCGGAACTCCCCTGTAATTTGCTTTTAGGTGGATTTCATATTC
ATAATGCAGAAGAATCCAAATATCAGGTTATTGCTGATTATTTGCACGAATATTTACCTCAAAAGATAGGTGTCTGTCAT
TGTACGGGAGTAGATAAATATGCTTTCTTCTATAAGGATTTTGGAGACAGAATATTTTATAACCATACAGGGAAATTGAT
TCAGACGGATTCTCTGTTATAA

Upstream 100 bases:

>100_bases
AGTCGATTTAAATTGATTGATTACTTGTTCTGCCGTAGAATTATTATAATTTTGTAGCAGAACTTTTTATTTCGTAGTAT
TTGATAAAGAACCAAACCAC

Downstream 100 bases:

>100_bases
TAATCTGCGACGACTAAACAAGAATATATAAAAACAAACTGGATGAATTTTAAAGACTGCATAGATTCTTATCCCTTTAT
ATTAATGGAAGGTGCTTTAG

Product: putative metallo-beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE
LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP
DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH
CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL

Sequences:

>Translated_273_residues
MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE
LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP
DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH
CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL
>Mature_273_residues
MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE
LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP
DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH
CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL

Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor

COG id: COG1237

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 31443; Mature: 31443

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVD
CCEEEHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCEEEECEEEEEEEHHHHE
YLVLSHGHSDHTGGLRHFLELNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFI
EEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH
DELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVPDTFPDELAMVLVEPEGLSIL
HHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHH
SACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH
HHHHCCCHHHHHHHHHHHCCCCCHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHCCEEE
CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL
ECCCCHHHHHHHHCCCEEEEECCCCEEECCCCC
>Mature Secondary Structure
MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVD
CCEEEHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCEEEECEEEEEEEHHHHE
YLVLSHGHSDHTGGLRHFLELNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFI
EEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH
DELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVPDTFPDELAMVLVEPEGLSIL
HHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHH
SACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH
HHHHCCCHHHHHHHHHHHCCCCCHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHCCEEE
CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL
ECCCCHHHHHHHHCCCEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]