| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346820
Identifier: 29346820
GI number: 29346820
Start: 1743635
End: 1744456
Strand: Reverse
Name: 29346820
Synonym: BT_1410
Alternate gene names: NA
Gene position: 1744456-1743635 (Counterclockwise)
Preceding gene: 29346822
Following gene: 29346819
Centisome position: 27.87
GC content: 38.56
Gene sequence:
>822_bases ATGAACTATAAAATAACGACTCTTGTCGAAAATTGTGTCTATGGACGTAAATTGCAGGCAGAACATGGTCTTTCCCTCTA TATTGAGACACCGGAAAACAGATTACTTTTTGATACGGGAGCTTCCGATTTATTTATCCGTAACGCCCGGTTATTGAATA TTGACTTGCAAAAAGTAGATTATTTAGTATTATCTCATGGTCACAGTGACCATACGGGTGGACTACGCCATTTTCTTGAA CTAAATGCCGAAGCAACGGTTGTCTGCAAACGCGAAGTGTTTTTTTCTAAATTCAAGGATGAACGTGAGAATGGAATGAA ATATACACGCTCGCTTGATCTTTCTCGTTTTCGTTTTATTGATGAGTTGACTGAACTGGTTCCCGGAGTATTTCTTTTTC CCTCTGTGGATATTATAGACCCGAAGGATACACATTTTGAACGATTTTGGATTCAAAAGGAAGATGGTTCTAGAGTCCCC GATACCTTTCCGGACGAGTTAGCTATGGTACTGGTTGAGCCTGAAGGACTTTCCATTTTAAGTGCCTGTTCCCACCGGGG TATTACAAATATATTGCGGACTGTAAGAACGGCATTTCCGGAACTCCCCTGTAATTTGCTTTTAGGTGGATTTCATATTC ATAATGCAGAAGAATCCAAATATCAGGTTATTGCTGATTATTTGCACGAATATTTACCTCAAAAGATAGGTGTCTGTCAT TGTACGGGAGTAGATAAATATGCTTTCTTCTATAAGGATTTTGGAGACAGAATATTTTATAACCATACAGGGAAATTGAT TCAGACGGATTCTCTGTTATAA
Upstream 100 bases:
>100_bases AGTCGATTTAAATTGATTGATTACTTGTTCTGCCGTAGAATTATTATAATTTTGTAGCAGAACTTTTTATTTCGTAGTAT TTGATAAAGAACCAAACCAC
Downstream 100 bases:
>100_bases TAATCTGCGACGACTAAACAAGAATATATAAAAACAAACTGGATGAATTTTAAAGACTGCATAGATTCTTATCCCTTTAT ATTAATGGAAGGTGCTTTAG
Product: putative metallo-beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL
Sequences:
>Translated_273_residues MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL >Mature_273_residues MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVDYLVLSHGHSDHTGGLRHFLE LNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFIDELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVP DTFPDELAMVLVEPEGLSILSACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 31443; Mature: 31443
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVD CCEEEHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCEEEECEEEEEEEHHHHE YLVLSHGHSDHTGGLRHFLELNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFI EEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH DELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVPDTFPDELAMVLVEPEGLSIL HHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHH SACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH HHHHCCCHHHHHHHHHHHCCCCCHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHCCEEE CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL ECCCCHHHHHHHHCCCEEEEECCCCEEECCCCC >Mature Secondary Structure MNYKITTLVENCVYGRKLQAEHGLSLYIETPENRLLFDTGASDLFIRNARLLNIDLQKVD CCEEEHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCCCEEEECEEEEEEEHHHHE YLVLSHGHSDHTGGLRHFLELNAEATVVCKREVFFSKFKDERENGMKYTRSLDLSRFRFI EEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHH DELTELVPGVFLFPSVDIIDPKDTHFERFWIQKEDGSRVPDTFPDELAMVLVEPEGLSIL HHHHHHCCCEEECCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHH SACSHRGITNILRTVRTAFPELPCNLLLGGFHIHNAEESKYQVIADYLHEYLPQKIGVCH HHHHCCCHHHHHHHHHHHCCCCCHHHEEECEEEECCCCHHHHHHHHHHHHHHHHHCCEEE CTGVDKYAFFYKDFGDRIFYNHTGKLIQTDSLL ECCCCHHHHHHHHCCCEEEEECCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]