| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346796
Identifier: 29346796
GI number: 29346796
Start: 1713572
End: 1714120
Strand: Reverse
Name: 29346796
Synonym: BT_1386
Alternate gene names: NA
Gene position: 1714120-1713572 (Counterclockwise)
Preceding gene: 29346797
Following gene: 29346795
Centisome position: 27.38
GC content: 41.71
Gene sequence:
>549_bases ATGGAAGCTTATTTGAAGAAACTCTGTTTTGAGTATCAGGTTGAAGAAAAGGAAGTGAAAGAGCTGTTGGCTCGCATGGA AAGAGTGTATCTGGATAAAGGAGAAACGATTGCTTCTGCTACAATGCCCGAGCAGAGCTTGTACATTATCGTTTCCGGTA TCCTGCATACATTTACTACCCAGCAGGGAGAGGACAAAACCGTCAGATTCCTGTCCGAAGGTGACGCTATATTGTGCTAC AATACAAGTAAGCATTCTGTCAAAACACTGACAAGGTGTGTGGCCTATTACATCAGCGAAGATGAGATCGAGGAATTGTG TGCAACGTCCATCACGTTTTCCAATCTGATTCGTCAGATGATGGAATATCAGTTTTACCTTAAAGAGGAAATGAGTGTGA ATGCACGTAAACTGACGATCAGGGAAAGATACCTTTCTTTATTATCAGAAATTCCCGATATTCTGTACAGAGTCCCTTTG AAGTACATTACTTATTATTTAGGGGCCGATGTGACAAGTCTGGGATATCTGGCCGGAAGCTGTAAATAA
Upstream 100 bases:
>100_bases TTAAGATATACCCGGAAGAAAGTTTATTTGAAAGGCACCATGATGCCTGCTATGTCGAATTAGGTGTTTTAAGTGGATAT ATTAACTAAAATCAATTTGT
Downstream 100 bases:
>100_bases GAAATGTCTCATTCTCTATATTTGAAGATATTCCTTGTTGAATAGTCTATTCTTACCCCGGTGCTTCTCAAAACCGGAAA GTCTTTGGATCATTTGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL KYITYYLGADVTSLGYLAGSCK
Sequences:
>Translated_182_residues MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL KYITYYLGADVTSLGYLAGSCK >Mature_182_residues MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL KYITYYLGADVTSLGYLAGSCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21095; Mature: 21095
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTT CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHC QQGEDKTVRFLSEGDAILCYNTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQM CCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPLKYITYYLGADVTSLGYLAGS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC CK CC >Mature Secondary Structure MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTT CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHC QQGEDKTVRFLSEGDAILCYNTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQM CCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH MEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPLKYITYYLGADVTSLGYLAGS HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC CK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA