Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346796

Identifier: 29346796

GI number: 29346796

Start: 1713572

End: 1714120

Strand: Reverse

Name: 29346796

Synonym: BT_1386

Alternate gene names: NA

Gene position: 1714120-1713572 (Counterclockwise)

Preceding gene: 29346797

Following gene: 29346795

Centisome position: 27.38

GC content: 41.71

Gene sequence:

>549_bases
ATGGAAGCTTATTTGAAGAAACTCTGTTTTGAGTATCAGGTTGAAGAAAAGGAAGTGAAAGAGCTGTTGGCTCGCATGGA
AAGAGTGTATCTGGATAAAGGAGAAACGATTGCTTCTGCTACAATGCCCGAGCAGAGCTTGTACATTATCGTTTCCGGTA
TCCTGCATACATTTACTACCCAGCAGGGAGAGGACAAAACCGTCAGATTCCTGTCCGAAGGTGACGCTATATTGTGCTAC
AATACAAGTAAGCATTCTGTCAAAACACTGACAAGGTGTGTGGCCTATTACATCAGCGAAGATGAGATCGAGGAATTGTG
TGCAACGTCCATCACGTTTTCCAATCTGATTCGTCAGATGATGGAATATCAGTTTTACCTTAAAGAGGAAATGAGTGTGA
ATGCACGTAAACTGACGATCAGGGAAAGATACCTTTCTTTATTATCAGAAATTCCCGATATTCTGTACAGAGTCCCTTTG
AAGTACATTACTTATTATTTAGGGGCCGATGTGACAAGTCTGGGATATCTGGCCGGAAGCTGTAAATAA

Upstream 100 bases:

>100_bases
TTAAGATATACCCGGAAGAAAGTTTATTTGAAAGGCACCATGATGCCTGCTATGTCGAATTAGGTGTTTTAAGTGGATAT
ATTAACTAAAATCAATTTGT

Downstream 100 bases:

>100_bases
GAAATGTCTCATTCTCTATATTTGAAGATATTCCTTGTTGAATAGTCTATTCTTACCCCGGTGCTTCTCAAAACCGGAAA
GTCTTTGGATCATTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY
NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL
KYITYYLGADVTSLGYLAGSCK

Sequences:

>Translated_182_residues
MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY
NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL
KYITYYLGADVTSLGYLAGSCK
>Mature_182_residues
MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTTQQGEDKTVRFLSEGDAILCY
NTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQMMEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPL
KYITYYLGADVTSLGYLAGSCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21095; Mature: 21095

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHC
QQGEDKTVRFLSEGDAILCYNTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQM
CCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPLKYITYYLGADVTSLGYLAGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
CK
CC
>Mature Secondary Structure
MEAYLKKLCFEYQVEEKEVKELLARMERVYLDKGETIASATMPEQSLYIIVSGILHTFTT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHC
QQGEDKTVRFLSEGDAILCYNTSKHSVKTLTRCVAYYISEDEIEELCATSITFSNLIRQM
CCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
MEYQFYLKEEMSVNARKLTIRERYLSLLSEIPDILYRVPLKYITYYLGADVTSLGYLAGS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
CK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA