| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ftnA [H]
Identifier: 29346783
GI number: 29346783
Start: 1701610
End: 1702089
Strand: Reverse
Name: ftnA [H]
Synonym: BT_1373
Alternate gene names: 29346783
Gene position: 1702089-1701610 (Counterclockwise)
Preceding gene: 29346784
Following gene: 29346780
Centisome position: 27.19
GC content: 42.5
Gene sequence:
>480_bases ATGATTTCAGAAAAATTACAGAAAGCAATCAATGAGCAGATCACTGCTGAAATGTGGTCTTCTAACCTGTATCTGGCAAT GTCTTTCTACTTTGAGAAAGAAGGTTTCAGTGGCTTTGCACATTGGATGAAGAAACAATCTCAGGAAGAAATGGGACATG CTTATGCAATGGCCGATTACATCATCAAACGTGGCGGAACTGCTATAGTTGACAAGATTGATGTGGTTCCCAATGGCTGG GGTACTCCGCTGGAAGTGTTTGAACACGTTTACAAACACGAATGCCATGTATCTGCATTGGTAGACAAGCTGGTAGATGT GGCTGCTGCTGAAAAAGATAAAGCTACTCAGGATTTCTTGTGGGGATTTGTCCGCGAACAGGTAGAAGAAGAAGCTACTG CACAGGGAATTGTGGATAAAATCAAGAAAGCTGGTGATACCGGTATTTTCTTTGTTGATTCACAACTGGGACAACGCTGA
Upstream 100 bases:
>100_bases AAAATGCAGGGAGCTTGGAACAATTTTAACTGAAATCTTGTTATTTTTGTAATGAGTTCAAAAGAAAACTACATTAACAA CTTAATAAAAATATACGATT
Downstream 100 bases:
>100_bases TAATGATCTGAAAAATAGAAAATTATATAAGAGAAGCTGTTTGGGTTTATATTCAGACAGCTTCTTTTTTTATCTTACTT ATCAACTTCCCTGCCGGGCT
Product: ferritin A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MISEKLQKAINEQITAEMWSSNLYLAMSFYFEKEGFSGFAHWMKKQSQEEMGHAYAMADYIIKRGGTAIVDKIDVVPNGW GTPLEVFEHVYKHECHVSALVDKLVDVAAAEKDKATQDFLWGFVREQVEEEATAQGIVDKIKKAGDTGIFFVDSQLGQR
Sequences:
>Translated_159_residues MISEKLQKAINEQITAEMWSSNLYLAMSFYFEKEGFSGFAHWMKKQSQEEMGHAYAMADYIIKRGGTAIVDKIDVVPNGW GTPLEVFEHVYKHECHVSALVDKLVDVAAAEKDKATQDFLWGFVREQVEEEATAQGIVDKIKKAGDTGIFFVDSQLGQR >Mature_159_residues MISEKLQKAINEQITAEMWSSNLYLAMSFYFEKEGFSGFAHWMKKQSQEEMGHAYAMADYIIKRGGTAIVDKIDVVPNGW GTPLEVFEHVYKHECHVSALVDKLVDVAAAEKDKATQDFLWGFVREQVEEEATAQGIVDKIKKAGDTGIFFVDSQLGQR
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=159, Percent_Identity=30.8176100628931, Blast_Score=94, Evalue=3e-21, Organism=Escherichia coli, GI1788212, Length=145, Percent_Identity=26.8965517241379, Blast_Score=67, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17506345, Length=145, Percent_Identity=31.0344827586207, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI24641673, Length=159, Percent_Identity=28.9308176100629, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 17971; Mature: 17971
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISEKLQKAINEQITAEMWSSNLYLAMSFYFEKEGFSGFAHWMKKQSQEEMGHAYAMADY CCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IIKRGGTAIVDKIDVVPNGWGTPLEVFEHVYKHECHVSALVDKLVDVAAAEKDKATQDFL HHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WGFVREQVEEEATAQGIVDKIKKAGDTGIFFVDSQLGQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure MISEKLQKAINEQITAEMWSSNLYLAMSFYFEKEGFSGFAHWMKKQSQEEMGHAYAMADY CCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IIKRGGTAIVDKIDVVPNGWGTPLEVFEHVYKHECHVSALVDKLVDVAAAEKDKATQDFL HHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH WGFVREQVEEEATAQGIVDKIKKAGDTGIFFVDSQLGQR HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA