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The map label for this gene is wbbL [H]

Identifier: 29346750

GI number: 29346750

Start: 1665404

End: 1666216

Strand: Reverse

Name: wbbL [H]

Synonym: BT_1340

Alternate gene names: 29346750

Gene position: 1666216-1665404 (Counterclockwise)

Preceding gene: 29346751

Following gene: 29346749

Centisome position: 26.62

GC content: 30.38

Gene sequence:

>813_bases
ATGATTACTGCATCAATTGTAACATACCATCATCACTTTAAGGATATTCGTAAGGTAATTGAATGTATATTGTCAAGTCC
TGTATCAATATTATACATCATTGATAATTCATCTAATGATAGACTGCGTGAATTGGCAAAAATATCAGCAAAAATAAAGT
ATATTCATAGTGTAAATTTAGGGTATGGTGCAGGGCATAATATTGCTATTCGAGAATCAATAGATATAGGGGCCACTTAT
CATATAGTGGTGAATCCTGATATTTATTTTGAGGAAGGAGTTATTGAAAAATTAATTATTTACATGAATAAATATTCAGA
AGTAGGTTTAGTAATGCCTAGGGTACTTTATCCAAATGGAGAACTACAATATTTATGTAAATTATTACCAACTCCCTTTG
ATTTATTATTTCGTCGTTTTCTTCCATGGAGAAGATATGTAGAAAAGAAAAATGAAAAATATGAACTTCGCTTTACAAAT
TATAGTCGAGAAATGGAAGTTCCATCGTTATCAGGTTGCTTTATGTTTGTGAGAATTGCTGTGTTAAAGAAGGTCGGAGG
GTTTGATGAACGTTATTTTATGTATGCAGAAGATTTAGATTTATGTCGTCGTATTGGGAAGGTATCACGAACTATGTATT
ACCCAAATGTGGTCGTTTATCATGAATATGCTAAAGGTTCATATAAAAATCGAAGGCTATTAAGATATCATCTTAGTTCT
GTTGTTAAATATTTTAATAAGTGGGGATGGGTTTGGGATTTAGATCGGAAGATAATAAATAAAAGGATTCTTGATAATTT
GAAAAATGTATAA

Upstream 100 bases:

>100_bases
ATTGATGGTCGTAATATTTATGAGGCACAAGATATGGTAAATCTTGGTTTTGACTATGTATGTATTGGAAGATAGTATTT
TTATAAAAACTAATATATAA

Downstream 100 bases:

>100_bases
AGGCAATTTACACTGATATGAATATTTTATTTATTATAATAGCTTTTGTAATTTCCGTTTGTGTAGCTAGACTGATAATT
CCACGCATTCTGTTAATTTC

Product: putative lipopolysaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: Rhamnosyltransferase [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MITASIVTYHHHFKDIRKVIECILSSPVSILYIIDNSSNDRLRELAKISAKIKYIHSVNLGYGAGHNIAIRESIDIGATY
HIVVNPDIYFEEGVIEKLIIYMNKYSEVGLVMPRVLYPNGELQYLCKLLPTPFDLLFRRFLPWRRYVEKKNEKYELRFTN
YSREMEVPSLSGCFMFVRIAVLKKVGGFDERYFMYAEDLDLCRRIGKVSRTMYYPNVVVYHEYAKGSYKNRRLLRYHLSS
VVKYFNKWGWVWDLDRKIINKRILDNLKNV

Sequences:

>Translated_270_residues
MITASIVTYHHHFKDIRKVIECILSSPVSILYIIDNSSNDRLRELAKISAKIKYIHSVNLGYGAGHNIAIRESIDIGATY
HIVVNPDIYFEEGVIEKLIIYMNKYSEVGLVMPRVLYPNGELQYLCKLLPTPFDLLFRRFLPWRRYVEKKNEKYELRFTN
YSREMEVPSLSGCFMFVRIAVLKKVGGFDERYFMYAEDLDLCRRIGKVSRTMYYPNVVVYHEYAKGSYKNRRLLRYHLSS
VVKYFNKWGWVWDLDRKIINKRILDNLKNV
>Mature_270_residues
MITASIVTYHHHFKDIRKVIECILSSPVSILYIIDNSSNDRLRELAKISAKIKYIHSVNLGYGAGHNIAIRESIDIGATY
HIVVNPDIYFEEGVIEKLIIYMNKYSEVGLVMPRVLYPNGELQYLCKLLPTPFDLLFRRFLPWRRYVEKKNEKYELRFTN
YSREMEVPSLSGCFMFVRIAVLKKVGGFDERYFMYAEDLDLCRRIGKVSRTMYYPNVVVYHEYAKGSYKNRRLLRYHLSS
VVKYFNKWGWVWDLDRKIINKRILDNLKNV

Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 32052; Mature: 32052

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITASIVTYHHHFKDIRKVIECILSSPVSILYIIDNSSNDRLRELAKISAKIKYIHSVNL
CEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEEEECC
GYGAGHNIAIRESIDIGATYHIVVNPDIYFEEGVIEKLIIYMNKYSEVGLVMPRVLYPNG
CCCCCCCEEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
ELQYLCKLLPTPFDLLFRRFLPWRRYVEKKNEKYELRFTNYSREMEVPSLSGCFMFVRIA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
VLKKVGGFDERYFMYAEDLDLCRRIGKVSRTMYYPNVVVYHEYAKGSYKNRRLLRYHLSS
HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHH
VVKYFNKWGWVWDLDRKIINKRILDNLKNV
HHHHHHHCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITASIVTYHHHFKDIRKVIECILSSPVSILYIIDNSSNDRLRELAKISAKIKYIHSVNL
CEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHEEEEEECC
GYGAGHNIAIRESIDIGATYHIVVNPDIYFEEGVIEKLIIYMNKYSEVGLVMPRVLYPNG
CCCCCCCEEEEECCCCCEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
ELQYLCKLLPTPFDLLFRRFLPWRRYVEKKNEKYELRFTNYSREMEVPSLSGCFMFVRIA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHH
VLKKVGGFDERYFMYAEDLDLCRRIGKVSRTMYYPNVVVYHEYAKGSYKNRRLLRYHLSS
HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCHHHHHHHHHH
VVKYFNKWGWVWDLDRKIINKRILDNLKNV
HHHHHHHCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]