| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is ylaK [H]
Identifier: 29346744
GI number: 29346744
Start: 1658872
End: 1660197
Strand: Reverse
Name: ylaK [H]
Synonym: BT_1334
Alternate gene names: 29346744
Gene position: 1660197-1658872 (Counterclockwise)
Preceding gene: 29346746
Following gene: 29346739
Centisome position: 26.52
GC content: 44.57
Gene sequence:
>1326_bases ATGGGAACTAAGAAAAATTTTGTAATTGACACAAATGTTATTCTTCACGACTACAATTGCTTGAAGAATTTTCAGGAAAA TGATATTCATCTCCCCCTTGTCGTACTGGAAGAACTGGACAAGTTCAAGAAAGGAAACGAGCAGATAAATTTCAATGCCC GTGAGTTTGTCCGGGAACTGGATTTGCTGACGAGTGACGAGCTGTTCTCCCAAGGGGTGAGTTTGGGAGAAGGAATGGGC CGCCTGTTTGTAGTTCCCGGAAACGTGGATGCTCCCAAAGTGCATGAGTCTTTTCCGGTGAAGAAACCCGACCATCTGAT ATTGGCAGCTGTTGAATACCTGGCAGCCAAATATCCGAAAACTCCGGCTATATTGGTGACCAAGGATGTAAACCTGCGTA TGAAAGCCCGTTCTATCGGTATTACCAGTGAGGACTATATCACAGATAAGGTATCCAATGTCGATATATTCGAGAAATCC AATGAGATCTTTGAAAATGTAGATCCGGCATTGATCGATCGCATCTATTCATCTAAAGAGGGCATTGATCTGAGCGAATT TGACTTTAAGGATGTCATTCACCCTAACGAATGCTTCGTTTTAAAGAGTGATCGTAACAGTGTACTGGCACGCTACAATC CTTTTACTCATTCCATTTGCCGGGTAACGAAAGGACGTAATTATGGTATTGAGCCCCGTAATGCCGAACAGAGTTTCGCT TTCGAGATACTGAATGATCCGAACGTCAAATTAGTGGCATTGACCGGAAAAGCGGGAACAGGTAAGACATTGCTGGCTTT GGCAGCTGCTTTAGGCAAGTTGACTGACTATAAACAGGTATTGCTGGCACGCCCGGTAGTGGCATTGTCCAACAAGGATA TCGGTTTCCTTCCGGGAGATGCCCAGGAAAAAGTGGCTCCTTACATGCAGCCGCTATTCGATAACCTGAATGTGATCAAG CGTCAGTTTGCCGCCAACTCGACCGAAGTGAAGCGTATCGAAGATATGCAGAAAAGCGAGCAACTGGTGATTGAAGCATT GGCTTTTATCCGCGGACGTAGTTTGAGCGAAATGTACTGTATCATTGACGAAGCGCAGAACCTTACCCCGAATGAAATAA AAACGATTATTACCCGTGCAGGTGAAGGTACGAAGATGGTATTCACAGGAGATATCCAGCAGATTGACCAGCCTTATCTG GATAGCCAGTCCAATGGTCTTGTGTATATGATCGACCGTATGAAAGACCAGAATATCTTTGCACATGTCAATCTGGTGAA AGGGGAACGTAGTCAGTTGAGTGAGTTGGCTAGCAACTTGTTATAA
Upstream 100 bases:
>100_bases ATTGCTCGCAAAATTGTTTATCTTTAGAACCATCAATTCAACCGATAGCGGGGGATTGATGAATCAGACTGCAAATATCA ACATTAAAATCTAAGAAATC
Downstream 100 bases:
>100_bases AAATGAAGAATTAAGAATGAAGAATGAAGAATCCGCTAGCGCATTTATGCTGCAAGTAATTCTTCATTCTTCATTCTTAA TTCTTCATTTCCCCAAAGTT
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MGTKKNFVIDTNVILHDYNCLKNFQENDIHLPLVVLEELDKFKKGNEQINFNAREFVRELDLLTSDELFSQGVSLGEGMG RLFVVPGNVDAPKVHESFPVKKPDHLILAAVEYLAAKYPKTPAILVTKDVNLRMKARSIGITSEDYITDKVSNVDIFEKS NEIFENVDPALIDRIYSSKEGIDLSEFDFKDVIHPNECFVLKSDRNSVLARYNPFTHSICRVTKGRNYGIEPRNAEQSFA FEILNDPNVKLVALTGKAGTGKTLLALAAALGKLTDYKQVLLARPVVALSNKDIGFLPGDAQEKVAPYMQPLFDNLNVIK RQFAANSTEVKRIEDMQKSEQLVIEALAFIRGRSLSEMYCIIDEAQNLTPNEIKTIITRAGEGTKMVFTGDIQQIDQPYL DSQSNGLVYMIDRMKDQNIFAHVNLVKGERSQLSELASNLL
Sequences:
>Translated_441_residues MGTKKNFVIDTNVILHDYNCLKNFQENDIHLPLVVLEELDKFKKGNEQINFNAREFVRELDLLTSDELFSQGVSLGEGMG RLFVVPGNVDAPKVHESFPVKKPDHLILAAVEYLAAKYPKTPAILVTKDVNLRMKARSIGITSEDYITDKVSNVDIFEKS NEIFENVDPALIDRIYSSKEGIDLSEFDFKDVIHPNECFVLKSDRNSVLARYNPFTHSICRVTKGRNYGIEPRNAEQSFA FEILNDPNVKLVALTGKAGTGKTLLALAAALGKLTDYKQVLLARPVVALSNKDIGFLPGDAQEKVAPYMQPLFDNLNVIK RQFAANSTEVKRIEDMQKSEQLVIEALAFIRGRSLSEMYCIIDEAQNLTPNEIKTIITRAGEGTKMVFTGDIQQIDQPYL DSQSNGLVYMIDRMKDQNIFAHVNLVKGERSQLSELASNLL >Mature_440_residues GTKKNFVIDTNVILHDYNCLKNFQENDIHLPLVVLEELDKFKKGNEQINFNAREFVRELDLLTSDELFSQGVSLGEGMGR LFVVPGNVDAPKVHESFPVKKPDHLILAAVEYLAAKYPKTPAILVTKDVNLRMKARSIGITSEDYITDKVSNVDIFEKSN EIFENVDPALIDRIYSSKEGIDLSEFDFKDVIHPNECFVLKSDRNSVLARYNPFTHSICRVTKGRNYGIEPRNAEQSFAF EILNDPNVKLVALTGKAGTGKTLLALAAALGKLTDYKQVLLARPVVALSNKDIGFLPGDAQEKVAPYMQPLFDNLNVIKR QFAANSTEVKRIEDMQKSEQLVIEALAFIRGRSLSEMYCIIDEAQNLTPNEIKTIITRAGEGTKMVFTGDIQQIDQPYLD SQSNGLVYMIDRMKDQNIFAHVNLVKGERSQLSELASNLL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=190, Percent_Identity=34.2105263157895, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI145693103, Length=189, Percent_Identity=36.5079365079365, Blast_Score=99, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 49509; Mature: 49378
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKKNFVIDTNVILHDYNCLKNFQENDIHLPLVVLEELDKFKKGNEQINFNAREFVREL CCCCCCEEEECCEEEECCHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEECCCHHHHHHHH DLLTSDELFSQGVSLGEGMGRLFVVPGNVDAPKVHESFPVKKPDHLILAAVEYLAAKYPK HHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC TPAILVTKDVNLRMKARSIGITSEDYITDKVSNVDIFEKSNEIFENVDPALIDRIYSSKE CCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCEEECCCHHHHHCCCHHHHHHHHCCCC GIDLSEFDFKDVIHPNECFVLKSDRNSVLARYNPFTHSICRVTKGRNYGIEPRNAEQSFA CCCCCCCCHHHCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEE FEILNDPNVKLVALTGKAGTGKTLLALAAALGKLTDYKQVLLARPVVALSNKDIGFLPGD EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCC AQEKVAPYMQPLFDNLNVIKRQFAANSTEVKRIEDMQKSEQLVIEALAFIRGRSLSEMYC HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE IIDEAQNLTPNEIKTIITRAGEGTKMVFTGDIQQIDQPYLDSQSNGLVYMIDRMKDQNIF EEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCCCCCEE AHVNLVKGERSQLSELASNLL EEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure GTKKNFVIDTNVILHDYNCLKNFQENDIHLPLVVLEELDKFKKGNEQINFNAREFVREL CCCCCEEEECCEEEECCHHHCCCCCCCCEEHHHHHHHHHHHHCCCCEECCCHHHHHHHH DLLTSDELFSQGVSLGEGMGRLFVVPGNVDAPKVHESFPVKKPDHLILAAVEYLAAKYPK HHCCCHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC TPAILVTKDVNLRMKARSIGITSEDYITDKVSNVDIFEKSNEIFENVDPALIDRIYSSKE CCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCEEECCCHHHHHCCCHHHHHHHHCCCC GIDLSEFDFKDVIHPNECFVLKSDRNSVLARYNPFTHSICRVTKGRNYGIEPRNAEQSFA CCCCCCCCHHHCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCEE FEILNDPNVKLVALTGKAGTGKTLLALAAALGKLTDYKQVLLARPVVALSNKDIGFLPGD EEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCC AQEKVAPYMQPLFDNLNVIKRQFAANSTEVKRIEDMQKSEQLVIEALAFIRGRSLSEMYC HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEE IIDEAQNLTPNEIKTIITRAGEGTKMVFTGDIQQIDQPYLDSQSNGLVYMIDRMKDQNIF EEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCCCCCCEEEEEECCCCCCEE AHVNLVKGERSQLSELASNLL EEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]