| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is phoU1 [H]
Identifier: 29346730
GI number: 29346730
Start: 1645521
End: 1646210
Strand: Reverse
Name: phoU1 [H]
Synonym: BT_1320
Alternate gene names: 29346730
Gene position: 1646210-1645521 (Counterclockwise)
Preceding gene: 29346731
Following gene: 29346727
Centisome position: 26.3
GC content: 45.65
Gene sequence:
>690_bases ATGGTAAAGTTTATAGAATCGGAGCTTATTCTATTGAAGAAAGAAGTGGATGAAATGTGGACATTGGTGTACAATCAGCT TGACCGTGCGGGAGAGGCCGTGATGACGCTTGATAAAGAACTGGCACAGCAAGTGATGGTGCGCGAACGTCGGGTGAATG CCTTTGAACTGAAGATAGACAGTGATATAGAGGATATCATCGCATTGTACAATCCGGTAGCGATTGACCTCCGTTTTGTG CTGGCAATGCTGAAAATCAATACGAATCTGGAACGTCTGGGAGACTTTGCAGAAGGTATAGCCCGTTTTGTTATCCGCTG CAAGGAACCGGTGCTGGATGCCGATTTGCTGGCCCGTCTGCGCCTGGGAGAGATGCAGGCAGAGGTTTTATCGATGCTGG AACTGGCGAAACGTGCCTTGAACGAAGAAAATATTGAGATGGCGACTGCGGTATTTGGCAAAGACAACCTGTTGGATGAC ATTAATGCGGAAGCAACGGGTATTCTGGCAGATTATATCCGTGAACATCCGGAAACGGCTCATACTTGTGTAGACTTGGT TGGCGTGTTCCGGAAATTGGAACGTTCAGGTGACCATATTACCAACATTGCAGAGGAAATAGTATTCTTTATTGATGCAA AAGTCTTAAAACATAGCGGAAAAGTAGACGAAAACTATCCAAAATCGTAG
Upstream 100 bases:
>100_bases AAAAGAGGCTACTCAGAATTATATAACCGGTCGTTTCGGTTAAGTATTGCCGGAGTGTTTGCAGAAAACAGAATATTAAT CATTTATATATAAAGAGACT
Downstream 100 bases:
>100_bases TTTTTTGCATGTTTTTAAACAAAAATTAGGGCTACTTAGAAAATAATCCTATATTTGTCACCTGTAACGGACAAGTTACG GGCGTTTTTACTGCAAATGA
Product: putative transcriptional regulator, phosphate uptake regulation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MVKFIESELILLKKEVDEMWTLVYNQLDRAGEAVMTLDKELAQQVMVRERRVNAFELKIDSDIEDIIALYNPVAIDLRFV LAMLKINTNLERLGDFAEGIARFVIRCKEPVLDADLLARLRLGEMQAEVLSMLELAKRALNEENIEMATAVFGKDNLLDD INAEATGILADYIREHPETAHTCVDLVGVFRKLERSGDHITNIAEEIVFFIDAKVLKHSGKVDENYPKS
Sequences:
>Translated_229_residues MVKFIESELILLKKEVDEMWTLVYNQLDRAGEAVMTLDKELAQQVMVRERRVNAFELKIDSDIEDIIALYNPVAIDLRFV LAMLKINTNLERLGDFAEGIARFVIRCKEPVLDADLLARLRLGEMQAEVLSMLELAKRALNEENIEMATAVFGKDNLLDD INAEATGILADYIREHPETAHTCVDLVGVFRKLERSGDHITNIAEEIVFFIDAKVLKHSGKVDENYPKS >Mature_229_residues MVKFIESELILLKKEVDEMWTLVYNQLDRAGEAVMTLDKELAQQVMVRERRVNAFELKIDSDIEDIIALYNPVAIDLRFV LAMLKINTNLERLGDFAEGIARFVIRCKEPVLDADLLARLRLGEMQAEVLSMLELAKRALNEENIEMATAVFGKDNLLDD INAEATGILADYIREHPETAHTCVDLVGVFRKLERSGDHITNIAEEIVFFIDAKVLKHSGKVDENYPKS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=221, Percent_Identity=28.9592760180996, Blast_Score=78, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26033; Mature: 26033
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKFIESELILLKKEVDEMWTLVYNQLDRAGEAVMTLDKELAQQVMVRERRVNAFELKID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SDIEDIIALYNPVAIDLRFVLAMLKINTNLERLGDFAEGIARFVIRCKEPVLDADLLARL CCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RLGEMQAEVLSMLELAKRALNEENIEMATAVFGKDNLLDDINAEATGILADYIREHPETA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCHH HTCVDLVGVFRKLERSGDHITNIAEEIVFFIDAKVLKHSGKVDENYPKS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVKFIESELILLKKEVDEMWTLVYNQLDRAGEAVMTLDKELAQQVMVRERRVNAFELKID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC SDIEDIIALYNPVAIDLRFVLAMLKINTNLERLGDFAEGIARFVIRCKEPVLDADLLARL CCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH RLGEMQAEVLSMLELAKRALNEENIEMATAVFGKDNLLDDINAEATGILADYIREHPETA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCHH HTCVDLVGVFRKLERSGDHITNIAEEIVFFIDAKVLKHSGKVDENYPKS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]