| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346369
Identifier: 29346369
GI number: 29346369
Start: 1173269
End: 1173778
Strand: Reverse
Name: 29346369
Synonym: BT_0959
Alternate gene names: NA
Gene position: 1173778-1173269 (Counterclockwise)
Preceding gene: 29346370
Following gene: 29346363
Centisome position: 18.75
GC content: 42.94
Gene sequence:
>510_bases ATGGAAACAACAGTAAAACTCTATTCACTGAATTACAGTAATGTGAAGACCTATTTGGCAGCCTCGTTATTCATCGTTGG CAATATCCTTTTTCCCAGGCTCTTTCATCTCATTCCACTAGGTGGATTAACCTGGCTGCCTATTTATTTCTTCACTCTGA TCGGTGCTTACAAATATGGCTGGAAGGTCGGTTTGCTAACTGCTATCTTGTCTCCAGTCATAAACTCTCTGCTCTTTGGT ATGCCAGTGCCCGCAGTATTGCCTGCCATCCTATTGAAATCCGTATTATTAGCTATCGCCGCCGGATGGGCTGCGCAACG CTTCGGACGCATTTCTATCCCTGTATTAGCAGGAGTAGTCTTGTTTTATCAGATCATCGGAACATTGGGAGAGTGGATGT ATATAGGAAATTTCTACAATGCTGTTCAGGACTTCCGCATCGGTATTCCCGGAATGTGCCTGCAAGTATTAGGAGGTTAT TTGTTTATTAAATACTTGATACGCAAGTAA
Upstream 100 bases:
>100_bases AAACCTGTTGGCACAACGTTACGAAATAAATGCAGGGTATCCCATGCCCAAGGCAACATTCATGGGTGGTATTAATTTGA ATTTCTAAAAGAATAAAGAT
Downstream 100 bases:
>100_bases TGTCTCTAATTAAAAAATAATAAGCTGCTTTTTCTGCAAAGAAAAAGCAGCTTATTATTTTATTCATCTGAATCATCTTC TATAATACCGGAAGAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues METTVKLYSLNYSNVKTYLAASLFIVGNILFPRLFHLIPLGGLTWLPIYFFTLIGAYKYGWKVGLLTAILSPVINSLLFG MPVPAVLPAILLKSVLLAIAAGWAAQRFGRISIPVLAGVVLFYQIIGTLGEWMYIGNFYNAVQDFRIGIPGMCLQVLGGY LFIKYLIRK
Sequences:
>Translated_169_residues METTVKLYSLNYSNVKTYLAASLFIVGNILFPRLFHLIPLGGLTWLPIYFFTLIGAYKYGWKVGLLTAILSPVINSLLFG MPVPAVLPAILLKSVLLAIAAGWAAQRFGRISIPVLAGVVLFYQIIGTLGEWMYIGNFYNAVQDFRIGIPGMCLQVLGGY LFIKYLIRK >Mature_169_residues METTVKLYSLNYSNVKTYLAASLFIVGNILFPRLFHLIPLGGLTWLPIYFFTLIGAYKYGWKVGLLTAILSPVINSLLFG MPVPAVLPAILLKSVLLAIAAGWAAQRFGRISIPVLAGVVLFYQIIGTLGEWMYIGNFYNAVQDFRIGIPGMCLQVLGGY LFIKYLIRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18770; Mature: 18770
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTVKLYSLNYSNVKTYLAASLFIVGNILFPRLFHLIPLGGLTWLPIYFFTLIGAYKYG CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WKVGLLTAILSPVINSLLFGMPVPAVLPAILLKSVLLAIAAGWAAQRFGRISIPVLAGVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LFYQIIGTLGEWMYIGNFYNAVQDFRIGIPGMCLQVLGGYLFIKYLIRK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure METTVKLYSLNYSNVKTYLAASLFIVGNILFPRLFHLIPLGGLTWLPIYFFTLIGAYKYG CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WKVGLLTAILSPVINSLLFGMPVPAVLPAILLKSVLLAIAAGWAAQRFGRISIPVLAGVV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LFYQIIGTLGEWMYIGNFYNAVQDFRIGIPGMCLQVLGGYLFIKYLIRK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA