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The map label for this gene is qseC [H]

Identifier: 29346337

GI number: 29346337

Start: 1140721

End: 1141998

Strand: Reverse

Name: qseC [H]

Synonym: BT_0927

Alternate gene names: 29346337

Gene position: 1141998-1140721 (Counterclockwise)

Preceding gene: 29346338

Following gene: 29346333

Centisome position: 18.24

GC content: 40.61

Gene sequence:

>1278_bases
ATGAAACTTATATATTATATCATTTTTCGCATCACCCTCGCCCTGACTCTTATCCTGACTGTCTGGGCAGTCTTTTTCTA
TGTTACGATGATTGACGAAGTCAACGATGAAGTGGATGATTCACTGGAAGACTATTCGGAAACAATCATTATCCGCGCAT
TGGCAGGAGAGGAGCTTCCCTCCAAAAATAATGGTTCCAATAATCAATATTATCTGAAAGAAATAACCAAAGAATATGCA
AAGAGCCGGGAAGATATCCAATATAAAGACTCCATGGTATACATTGTAGAAAAAGAGGAAACAGAACCGGCACGTATTCT
GACCACTATCTTTAAAGATGACGAAGACCGTTATTACGAATTGACCGTATCCACTCCCAGCATCGAAAAAGATGATTTGA
AAAGTGCGATTCAAGTCTGGATTATTTTCCTGTATGTAGCTCTGTTACTTTGTATCATCATCATATCCGTATGGGTATTT
TATCGTAATATGCGACCGCTGTATATACTACTTCATTGGTTGGACAGCTATCAGACCGGAAAGAAAAACAAACCTCTGAA
AAACGATACACGGATCACGGAATTCCGCAAACTGAATGATGCGGCCACCCGTTACGTAGAGCGGACAGAACAAATGTTCG
AACAGCAGAAGCAGTTCATTGGAAACGCCTCACATGAAATTCAGACACCGCTTGCCATCTGCCGCAATCGGTTGGAAATG
CTGATGGAAGACGATTCTTTGTCCGAGAAACAGCTTGAAGAGTTGATGAAAACCCATCAGACACTGAAATATATCACCAA
ACTAAACAAATCCCTGTTGCTGCTATCAAAAATAGATAACGGCCAGTTCACCGACACCAAAGAGGTAGACTTAAACGTAC
TCCTCAGGCAATACCTGGAAGACTATAAAGAAGTCTACAGCTACAAGAACATAGAAGTAAGTATAACAGAACAGGCTAAT
TTCCATATAACCATGAACGAATCTCTGGCTATTGCTTTACTAACAAACCTGTTAAAGAACGCGTTTGTACATAACGTAGA
CGAAGGACATATCCGGATTATCATAACCAAACATAGCATCACCTTCCGAAATTCCGGAGAGAAGCAACCACTGGATGAGA
CTCACATCTTTGAACGTTTCTATCAAGGACACAAAAAAGAAGGATCTACTGGATTAGGACTGGCAATAACCGATTCCATC
TGCCGTCTGCAACAGTTGAACTTGCGATATTACTTCGAACAAGGAGAACATTGTTTCGAAATCTCCAACAAGAACTAG

Upstream 100 bases:

>100_bases
AAAAAATTGAAGGATGCAAAAGCAAATATTGAAATCAAGGCCGTTTATGGATTCGGCTATAAACTGATTGTAGAATAATC
GAAACCAGAAAGGATCATCC

Downstream 100 bases:

>100_bases
AAGTAAAACAATTAATAAAACATCTGCCATCCAGAGCAAGACAATGTGCTGGATGGCAGAATTAATAGGGTACTACCTAA
GATTACACCTTATGACAATA

Product: two-component system sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKLIYYIIFRITLALTLILTVWAVFFYVTMIDEVNDEVDDSLEDYSETIIIRALAGEELPSKNNGSNNQYYLKEITKEYA
KSREDIQYKDSMVYIVEKEETEPARILTTIFKDDEDRYYELTVSTPSIEKDDLKSAIQVWIIFLYVALLLCIIIISVWVF
YRNMRPLYILLHWLDSYQTGKKNKPLKNDTRITEFRKLNDAATRYVERTEQMFEQQKQFIGNASHEIQTPLAICRNRLEM
LMEDDSLSEKQLEELMKTHQTLKYITKLNKSLLLLSKIDNGQFTDTKEVDLNVLLRQYLEDYKEVYSYKNIEVSITEQAN
FHITMNESLAIALLTNLLKNAFVHNVDEGHIRIIITKHSITFRNSGEKQPLDETHIFERFYQGHKKEGSTGLGLAITDSI
CRLQQLNLRYYFEQGEHCFEISNKN

Sequences:

>Translated_425_residues
MKLIYYIIFRITLALTLILTVWAVFFYVTMIDEVNDEVDDSLEDYSETIIIRALAGEELPSKNNGSNNQYYLKEITKEYA
KSREDIQYKDSMVYIVEKEETEPARILTTIFKDDEDRYYELTVSTPSIEKDDLKSAIQVWIIFLYVALLLCIIIISVWVF
YRNMRPLYILLHWLDSYQTGKKNKPLKNDTRITEFRKLNDAATRYVERTEQMFEQQKQFIGNASHEIQTPLAICRNRLEM
LMEDDSLSEKQLEELMKTHQTLKYITKLNKSLLLLSKIDNGQFTDTKEVDLNVLLRQYLEDYKEVYSYKNIEVSITEQAN
FHITMNESLAIALLTNLLKNAFVHNVDEGHIRIIITKHSITFRNSGEKQPLDETHIFERFYQGHKKEGSTGLGLAITDSI
CRLQQLNLRYYFEQGEHCFEISNKN
>Mature_425_residues
MKLIYYIIFRITLALTLILTVWAVFFYVTMIDEVNDEVDDSLEDYSETIIIRALAGEELPSKNNGSNNQYYLKEITKEYA
KSREDIQYKDSMVYIVEKEETEPARILTTIFKDDEDRYYELTVSTPSIEKDDLKSAIQVWIIFLYVALLLCIIIISVWVF
YRNMRPLYILLHWLDSYQTGKKNKPLKNDTRITEFRKLNDAATRYVERTEQMFEQQKQFIGNASHEIQTPLAICRNRLEM
LMEDDSLSEKQLEELMKTHQTLKYITKLNKSLLLLSKIDNGQFTDTKEVDLNVLLRQYLEDYKEVYSYKNIEVSITEQAN
FHITMNESLAIALLTNLLKNAFVHNVDEGHIRIIITKHSITFRNSGEKQPLDETHIFERFYQGHKKEGSTGLGLAITDSI
CRLQQLNLRYYFEQGEHCFEISNKN

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=329, Percent_Identity=25.531914893617, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787894, Length=276, Percent_Identity=26.4492753623188, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1788393, Length=201, Percent_Identity=26.865671641791, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082128, Length=248, Percent_Identity=27.0161290322581, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786600, Length=207, Percent_Identity=29.4685990338164, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50064; Mature: 50064

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIYYIIFRITLALTLILTVWAVFFYVTMIDEVNDEVDDSLEDYSETIIIRALAGEELP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCCC
SKNNGSNNQYYLKEITKEYAKSREDIQYKDSMVYIVEKEETEPARILTTIFKDDEDRYYE
CCCCCCCCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCEEE
LTVSTPSIEKDDLKSAIQVWIIFLYVALLLCIIIISVWVFYRNMRPLYILLHWLDSYQTG
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
KKNKPLKNDTRITEFRKLNDAATRYVERTEQMFEQQKQFIGNASHEIQTPLAICRNRLEM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
LMEDDSLSEKQLEELMKTHQTLKYITKLNKSLLLLSKIDNGQFTDTKEVDLNVLLRQYLE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHH
DYKEVYSYKNIEVSITEQANFHITMNESLAIALLTNLLKNAFVHNVDEGHIRIIITKHSI
HHHHHHCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEE
TFRNSGEKQPLDETHIFERFYQGHKKEGSTGLGLAITDSICRLQQLNLRYYFEQGEHCFE
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEE
ISNKN
CCCCC
>Mature Secondary Structure
MKLIYYIIFRITLALTLILTVWAVFFYVTMIDEVNDEVDDSLEDYSETIIIRALAGEELP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCCC
SKNNGSNNQYYLKEITKEYAKSREDIQYKDSMVYIVEKEETEPARILTTIFKDDEDRYYE
CCCCCCCCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCHHHHHHHHHCCCCCCEEE
LTVSTPSIEKDDLKSAIQVWIIFLYVALLLCIIIISVWVFYRNMRPLYILLHWLDSYQTG
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
KKNKPLKNDTRITEFRKLNDAATRYVERTEQMFEQQKQFIGNASHEIQTPLAICRNRLEM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHH
LMEDDSLSEKQLEELMKTHQTLKYITKLNKSLLLLSKIDNGQFTDTKEVDLNVLLRQYLE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHH
DYKEVYSYKNIEVSITEQANFHITMNESLAIALLTNLLKNAFVHNVDEGHIRIIITKHSI
HHHHHHCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEE
TFRNSGEKQPLDETHIFERFYQGHKKEGSTGLGLAITDSICRLQQLNLRYYFEQGEHCFE
EECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEE
ISNKN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]