| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346333
Identifier: 29346333
GI number: 29346333
Start: 1137080
End: 1137517
Strand: Reverse
Name: 29346333
Synonym: BT_0923
Alternate gene names: NA
Gene position: 1137517-1137080 (Counterclockwise)
Preceding gene: 29346337
Following gene: 29346332
Centisome position: 18.17
GC content: 37.67
Gene sequence:
>438_bases ATGAAAAAGTTAGTATTCTTATTAGTATGCTTGTTCACTTTACAGACAGTAGCACGTGCAGATGACGATAAACCTATCCA GGTGACTCAAATGCCACAATTAGCACAACAGTTCATCAAACAGCATTTCTCTGACAGCAAAGTGGCACTGGCAAAAATGG AAAGTGACTTCCTTTACAAAAGCTATGAAGTGATTTTCACGAATGGTAATAAAGTGGAATTTGACAAGAAGGGAAACTGG GAGGAAGTAGATTGCAAGCACACCTCCGTACCTGTTGCCATTATTCCTGCCGCCATTCAGAAATATGTAACAACTAATTA TCCGGATGCAAAAGTGCTGAAGATAGAACGTGATAAGAAAGATTACGAAGTAAAGCTATCCAACCGTACAGAACTGAAAT TTGACCTGAAGTTTAATCTGATTGATATTGATAATTAA
Upstream 100 bases:
>100_bases CAGATTTTGCCCAAAATTCCCAAATCTTTTCAGATTCTCCTCTCATCTTTGCATTATAAATTAAATGATAACAGTAAAAC CAATTAAAAAAACAATGATT
Downstream 100 bases:
>100_bases CTTTCTTAAAATCTACGACAACAATGAAACTCAGAATTTATACACTACTGATAGCATTCTGTGCAGCATGGAGCCTGCAC AGCTGCGACAACGATGACGA
Product: putative periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKKLVFLLVCLFTLQTVARADDDKPIQVTQMPQLAQQFIKQHFSDSKVALAKMESDFLYKSYEVIFTNGNKVEFDKKGNW EEVDCKHTSVPVAIIPAAIQKYVTTNYPDAKVLKIERDKKDYEVKLSNRTELKFDLKFNLIDIDN
Sequences:
>Translated_145_residues MKKLVFLLVCLFTLQTVARADDDKPIQVTQMPQLAQQFIKQHFSDSKVALAKMESDFLYKSYEVIFTNGNKVEFDKKGNW EEVDCKHTSVPVAIIPAAIQKYVTTNYPDAKVLKIERDKKDYEVKLSNRTELKFDLKFNLIDIDN >Mature_145_residues MKKLVFLLVCLFTLQTVARADDDKPIQVTQMPQLAQQFIKQHFSDSKVALAKMESDFLYKSYEVIFTNGNKVEFDKKGNW EEVDCKHTSVPVAIIPAAIQKYVTTNYPDAKVLKIERDKKDYEVKLSNRTELKFDLKFNLIDIDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16825; Mature: 16825
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVFLLVCLFTLQTVARADDDKPIQVTQMPQLAQQFIKQHFSDSKVALAKMESDFLYK CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEHHCCCCEEE SYEVIFTNGNKVEFDKKGNWEEVDCKHTSVPVAIIPAAIQKYVTTNYPDAKVLKIERDKK EEEEEEECCCEEEECCCCCCCEECCCCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCC DYEVKLSNRTELKFDLKFNLIDIDN CEEEEECCCCEEEEEEEEEEEEECC >Mature Secondary Structure MKKLVFLLVCLFTLQTVARADDDKPIQVTQMPQLAQQFIKQHFSDSKVALAKMESDFLYK CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEHHCCCCEEE SYEVIFTNGNKVEFDKKGNWEEVDCKHTSVPVAIIPAAIQKYVTTNYPDAKVLKIERDKK EEEEEEECCCEEEECCCCCCCEECCCCCCCCCEEHHHHHHHHHCCCCCCEEEEEEECCCC DYEVKLSNRTELKFDLKFNLIDIDN CEEEEECCCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA