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The map label for this gene is ychK [C]

Identifier: 29346306

GI number: 29346306

Start: 1100188

End: 1102446

Strand: Reverse

Name: ychK [C]

Synonym: BT_0896

Alternate gene names: 29346306

Gene position: 1102446-1100188 (Counterclockwise)

Preceding gene: 29346307

Following gene: 29346303

Centisome position: 17.61

GC content: 39.35

Gene sequence:

>2259_bases
ATGCCGACTGTCTGTGCCCAAAAAGTAGGTCTTGTCTTAAGTGGTGGCGGTGCCAAAGGATTGACACACATCGGCATCAT
TCGCGCCTTAGAAGAAAATAACATTCCTATCGATTATATTACAGGAACTTCCATGGGAGCCATTATCGGCTCTCTTTATG
CGATGGGGTATTCTCCTGATGATATGGAAGAATTATTGAAGTCAGAAGACTTTAAAAGATGGTATTCTGGACAAATAGAA
GAGAAATACGTATACCACTTCAAGAAAAATGTCCCGACACCGGAGTTTTTTAATATCCGTTTCTCATTCAAAGACTCATT
AAAAAACTTCAAACCACAATTTCTGCCCACAAGCGTAGTAAATCCCATACAGATGAATCTGGTTTTTGTAGATTTGTATG
CACGCGCTACAGCTTCGTGTAAAGGCGATTTCGACAAGTTGTTCGTTCCTTTCCGATGCATAGCTTCTGATGTCTACAAT
AAAAAGCAACTCGTAATGAGAAACGGAGATTTGGGAGATGCCGTCCGAGCTTCCATGAGCTTTCCCTTTATGTTTAAGCC
TATAGAGATTGACAATGTGCTGGCATATGACGGAGGGATCTACAATAATTTCCCAACAGACGTTATGAGAGACGATTTTC
ATCCGGATATTATAATTGGAAGTGTGGTATCTACAAACCCCACCAAACCCAAGGAAAATGACCTCATGAGCCAGATAGAA
AACATGGTCATGCAAAAAACCGACTATTCTATTCCGGATTCAATGGGTATTCTGATGACATTCAAATATGACAATGTCAG
CTTGATGGATTTTCAGCGAATAGATGAATTGCATGATATCGGATATAACCGAACCATAAGCATGATGGATTCTATAAAAA
GCCGTATACAAAGGAGGGTTAATTTGGATAATATACGTTTGAGAAGAATGGTATACCGAAGCAACTATCCGGAATTACGC
TTCAAAAACATCATTATTGACGGAGCCAATCCCCAACAACAGGCATATATTAAAAAAGAATTTCATAGCTCTGACAATAA
GGAATTCACTTACGAAGACTTGAAAGAAGGCTATTTCCGGCTGCTTTCAGACAACATGATTTCCGAAATCATCCCGCACG
CCGTATATAATCCGAAGGACGAAACGTATGACCTGCATTTAAAAGTCAAACTGGAAAATAATTTTGCCGTACGATTAGGT
GGGAATATTTCCACGTCCAACTCGAATCAAATTTATCTCGGGCTCAGCTATCAGGATTTAAATTACTATGCGAAAGAATT
TCTTTTTGACGGTCAACTCGGGAAAGTCTATAATAATGCACAATTCATGGCTAAGATCGACTTTTCTACTGCGATCCCGA
CCTCTTACCGCTTTATCGCATCTATTACTACTTTCGACTATTTTAAGAAAGACAAGTTATTTTCCAGAAATGACAAGCCA
GCATTTAATCAGAAAGACGAACGCTTCCTTAAACTTCAGGTAGGGCTACCGTTCCTTTTAAGTAAACGAGCTGAATTTGG
AATAGGAATCGCCAGAATAGAAGACAAATATTTCCAGAGAAATATCATCGATTTTGAGAAAGACAGATTCGACAGAAGCC
GTTATGATTTATTCGGCGGCTCTATCAGCTTCAATGGAAGCACACTTAATTCACGGCAATACCCGACACAAGGCTACAAA
GAAGCTCTTGTTGCACAGATATTCATGGGACGGGAAAGATTCTATCCAGGTGAAGAGACCAAAGGAGTTCAAATAAATAA
AGAACACCATTCCTGGCTGCAATTATCATATATGAAAGAAAAATACCATACGATGAGCGAACACTGGGTTTTGGGATGGT
ATTTAAAAGCTTTGTACGCTTCCAAGAACTTTTCCGAGAATTATACGGCGACTATGATGCAAGCAGGTGAGTTTTCACCT
ACTCTACATAGTAAACTCACCTATAATGAAGCTTTCCGCGCCAATCAATTTGTGGGAGCCGGCATTCGTCCCATCTATCG
TCTCAATCAAATGTTCCATCTGCGAGGTGAATTTTATGGTTTTATGCCTATATATCCGATTGAAAGAAACTCATTAAATA
AGGCATATTATGGAAAAGCCTTCTCTAAATTCGAATATTTGGGAGAAATTTCTGTTGTGTGTCAATTACCGTTCGGAGAC
ATCTCTGCTTATGTAAATCATTATAGCTCACCGAGAAGGGAGTGGAATGTCGGGTTAAGTATCGGTTTCCAACTGTTTAA
TTACCGTTTCATCGAATAA

Upstream 100 bases:

>100_bases
AAGTATTGTATATATTTGAACACTAAATGATAAATACTTCAATTGTTTGATTTGGGTTATGAGAAAAATACTTTTAGTGT
TAATTGCTATATGGTTATTC

Downstream 100 bases:

>100_bases
TTTTCTACAAAAAAAAGTCGCCGAATGCTTGCTAATTCGGGAAAAGTACGTATCTTTGCACCCGTTAAAACGAAACAATG
GTCGCGTAGCTCAACTGAAT

Product: putative patatin-like phospholipase

Products: NA

Alternate protein names: Serine Protease; Patatin-Like Phospholipase; Phospholipase Patatin Family; Outer Membrane Protein; Surface Antigen; Patatin-Like Phospholipase Family Protein; Patatin Family Protein; Esterase; Alpha-Beta Hydrolase Family Esterase; Phospholipase Family Protein; Patatin-Like Protein Of Phospholipase Family Protein; Patatin-Like Phospholipase Family; Esterase Of Alpha-Beta Hydrolase Superfamily; Alpha-Beta Hydrolase Superfamily Esterase; OMP85 Family Outer Membrane Protein; Lysophospholipase; Outer Membrane Protein/Esterase; Periplasmic Esterase Or Lipase; Phospholipase; Patatin Family Outer Membrane Protein; Lipoprotein Transmembrane Protein; Patatin Family Phospholipase; Patatin-Like Lipid Acyl Hydrolase Protein; Transmembrane; Phopholipase

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MPTVCAQKVGLVLSGGGAKGLTHIGIIRALEENNIPIDYITGTSMGAIIGSLYAMGYSPDDMEELLKSEDFKRWYSGQIE
EKYVYHFKKNVPTPEFFNIRFSFKDSLKNFKPQFLPTSVVNPIQMNLVFVDLYARATASCKGDFDKLFVPFRCIASDVYN
KKQLVMRNGDLGDAVRASMSFPFMFKPIEIDNVLAYDGGIYNNFPTDVMRDDFHPDIIIGSVVSTNPTKPKENDLMSQIE
NMVMQKTDYSIPDSMGILMTFKYDNVSLMDFQRIDELHDIGYNRTISMMDSIKSRIQRRVNLDNIRLRRMVYRSNYPELR
FKNIIIDGANPQQQAYIKKEFHSSDNKEFTYEDLKEGYFRLLSDNMISEIIPHAVYNPKDETYDLHLKVKLENNFAVRLG
GNISTSNSNQIYLGLSYQDLNYYAKEFLFDGQLGKVYNNAQFMAKIDFSTAIPTSYRFIASITTFDYFKKDKLFSRNDKP
AFNQKDERFLKLQVGLPFLLSKRAEFGIGIARIEDKYFQRNIIDFEKDRFDRSRYDLFGGSISFNGSTLNSRQYPTQGYK
EALVAQIFMGRERFYPGEETKGVQINKEHHSWLQLSYMKEKYHTMSEHWVLGWYLKALYASKNFSENYTATMMQAGEFSP
TLHSKLTYNEAFRANQFVGAGIRPIYRLNQMFHLRGEFYGFMPIYPIERNSLNKAYYGKAFSKFEYLGEISVVCQLPFGD
ISAYVNHYSSPRREWNVGLSIGFQLFNYRFIE

Sequences:

>Translated_752_residues
MPTVCAQKVGLVLSGGGAKGLTHIGIIRALEENNIPIDYITGTSMGAIIGSLYAMGYSPDDMEELLKSEDFKRWYSGQIE
EKYVYHFKKNVPTPEFFNIRFSFKDSLKNFKPQFLPTSVVNPIQMNLVFVDLYARATASCKGDFDKLFVPFRCIASDVYN
KKQLVMRNGDLGDAVRASMSFPFMFKPIEIDNVLAYDGGIYNNFPTDVMRDDFHPDIIIGSVVSTNPTKPKENDLMSQIE
NMVMQKTDYSIPDSMGILMTFKYDNVSLMDFQRIDELHDIGYNRTISMMDSIKSRIQRRVNLDNIRLRRMVYRSNYPELR
FKNIIIDGANPQQQAYIKKEFHSSDNKEFTYEDLKEGYFRLLSDNMISEIIPHAVYNPKDETYDLHLKVKLENNFAVRLG
GNISTSNSNQIYLGLSYQDLNYYAKEFLFDGQLGKVYNNAQFMAKIDFSTAIPTSYRFIASITTFDYFKKDKLFSRNDKP
AFNQKDERFLKLQVGLPFLLSKRAEFGIGIARIEDKYFQRNIIDFEKDRFDRSRYDLFGGSISFNGSTLNSRQYPTQGYK
EALVAQIFMGRERFYPGEETKGVQINKEHHSWLQLSYMKEKYHTMSEHWVLGWYLKALYASKNFSENYTATMMQAGEFSP
TLHSKLTYNEAFRANQFVGAGIRPIYRLNQMFHLRGEFYGFMPIYPIERNSLNKAYYGKAFSKFEYLGEISVVCQLPFGD
ISAYVNHYSSPRREWNVGLSIGFQLFNYRFIE
>Mature_751_residues
PTVCAQKVGLVLSGGGAKGLTHIGIIRALEENNIPIDYITGTSMGAIIGSLYAMGYSPDDMEELLKSEDFKRWYSGQIEE
KYVYHFKKNVPTPEFFNIRFSFKDSLKNFKPQFLPTSVVNPIQMNLVFVDLYARATASCKGDFDKLFVPFRCIASDVYNK
KQLVMRNGDLGDAVRASMSFPFMFKPIEIDNVLAYDGGIYNNFPTDVMRDDFHPDIIIGSVVSTNPTKPKENDLMSQIEN
MVMQKTDYSIPDSMGILMTFKYDNVSLMDFQRIDELHDIGYNRTISMMDSIKSRIQRRVNLDNIRLRRMVYRSNYPELRF
KNIIIDGANPQQQAYIKKEFHSSDNKEFTYEDLKEGYFRLLSDNMISEIIPHAVYNPKDETYDLHLKVKLENNFAVRLGG
NISTSNSNQIYLGLSYQDLNYYAKEFLFDGQLGKVYNNAQFMAKIDFSTAIPTSYRFIASITTFDYFKKDKLFSRNDKPA
FNQKDERFLKLQVGLPFLLSKRAEFGIGIARIEDKYFQRNIIDFEKDRFDRSRYDLFGGSISFNGSTLNSRQYPTQGYKE
ALVAQIFMGRERFYPGEETKGVQINKEHHSWLQLSYMKEKYHTMSEHWVLGWYLKALYASKNFSENYTATMMQAGEFSPT
LHSKLTYNEAFRANQFVGAGIRPIYRLNQMFHLRGEFYGFMPIYPIERNSLNKAYYGKAFSKFEYLGEISVVCQLPFGDI
SAYVNHYSSPRREWNVGLSIGFQLFNYRFIE

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71997289, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997299, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=231, Percent_Identity=26.4069264069264, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87329; Mature: 87197

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVCAQKVGLVLSGGGAKGLTHIGIIRALEENNIPIDYITGTSMGAIIGSLYAMGYSPD
CCCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCH
DMEELLKSEDFKRWYSGQIEEKYVYHFKKNVPTPEFFNIRFSFKDSLKNFKPQFLPTSVV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHHHHCCCCCCCCHHHC
NPIQMNLVFVDLYARATASCKGDFDKLFVPFRCIASDVYNKKQLVMRNGDLGDAVRASMS
CCEEEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCC
FPFMFKPIEIDNVLAYDGGIYNNFPTDVMRDDFHPDIIIGSVVSTNPTKPKENDLMSQIE
CCEEEECEEECCEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
NMVMQKTDYSIPDSMGILMTFKYDNVSLMDFQRIDELHDIGYNRTISMMDSIKSRIQRRV
HHHHHHCCCCCCCCCCEEEEEEECCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NLDNIRLRRMVYRSNYPELRFKNIIIDGANPQQQAYIKKEFHSSDNKEFTYEDLKEGYFR
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LLSDNMISEIIPHAVYNPKDETYDLHLKVKLENNFAVRLGGNISTSNSNQIYLGLSYQDL
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCEEECCCCCEEEEEEEEHHH
NYYAKEFLFDGQLGKVYNNAQFMAKIDFSTAIPTSYRFIASITTFDYFKKDKLFSRNDKP
HHHHHHHHCCCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCC
AFNQKDERFLKLQVGLPFLLSKRAEFGIGIARIEDKYFQRNIIDFEKDRFDRSRYDLFGG
CCCCCCCEEEEEEECCCHHHHCCHHHCCEEEHHHHHHHHHCCCCCHHHHCCCCHHHCCCC
SISFNGSTLNSRQYPTQGYKEALVAQIFMGRERFYPGEETKGVQINKEHHSWLQLSYMKE
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHH
KYHTMSEHWVLGWYLKALYASKNFSENYTATMMQAGEFSPTLHSKLTYNEAFRANQFVGA
HHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCC
GIRPIYRLNQMFHLRGEFYGFMPIYPIERNSLNKAYYGKAFSKFEYLGEISVVCQLPFGD
CCHHHHHHHHHHEECCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHH
ISAYVNHYSSPRREWNVGLSIGFQLFNYRFIE
HHHHHHHCCCCCCEEECCCEEEEEEEEEEECC
>Mature Secondary Structure 
PTVCAQKVGLVLSGGGAKGLTHIGIIRALEENNIPIDYITGTSMGAIIGSLYAMGYSPD
CCHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCH
DMEELLKSEDFKRWYSGQIEEKYVYHFKKNVPTPEFFNIRFSFKDSLKNFKPQFLPTSVV
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHHHHCCCCCCCCHHHC
NPIQMNLVFVDLYARATASCKGDFDKLFVPFRCIASDVYNKKQLVMRNGDLGDAVRASMS
CCEEEEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCC
FPFMFKPIEIDNVLAYDGGIYNNFPTDVMRDDFHPDIIIGSVVSTNPTKPKENDLMSQIE
CCEEEECEEECCEEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
NMVMQKTDYSIPDSMGILMTFKYDNVSLMDFQRIDELHDIGYNRTISMMDSIKSRIQRRV
HHHHHHCCCCCCCCCCEEEEEEECCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
NLDNIRLRRMVYRSNYPELRFKNIIIDGANPQQQAYIKKEFHSSDNKEFTYEDLKEGYFR
CCCHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LLSDNMISEIIPHAVYNPKDETYDLHLKVKLENNFAVRLGGNISTSNSNQIYLGLSYQDL
HHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCEEECCCCCEEEEEEEEHHH
NYYAKEFLFDGQLGKVYNNAQFMAKIDFSTAIPTSYRFIASITTFDYFKKDKLFSRNDKP
HHHHHHHHCCCCHHHHCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCC
AFNQKDERFLKLQVGLPFLLSKRAEFGIGIARIEDKYFQRNIIDFEKDRFDRSRYDLFGG
CCCCCCCEEEEEEECCCHHHHCCHHHCCEEEHHHHHHHHHCCCCCHHHHCCCCHHHCCCC
SISFNGSTLNSRQYPTQGYKEALVAQIFMGRERFYPGEETKGVQINKEHHSWLQLSYMKE
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHH
KYHTMSEHWVLGWYLKALYASKNFSENYTATMMQAGEFSPTLHSKLTYNEAFRANQFVGA
HHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHCCCHHHHHHCCCCCCC
GIRPIYRLNQMFHLRGEFYGFMPIYPIERNSLNKAYYGKAFSKFEYLGEISVVCQLPFGD
CCHHHHHHHHHHEECCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHH
ISAYVNHYSSPRREWNVGLSIGFQLFNYRFIE
HHHHHHHCCCCCCEEECCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA