| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346119
Identifier: 29346119
GI number: 29346119
Start: 881771
End: 884146
Strand: Reverse
Name: 29346119
Synonym: BT_0709
Alternate gene names: NA
Gene position: 884146-881771 (Counterclockwise)
Preceding gene: 29346120
Following gene: 29346117
Centisome position: 14.12
GC content: 50.25
Gene sequence:
>2376_bases ATGAGAAAGCACATGTACCAAGTGTCACTATTTATCAACACTTGGAGTAAAACTCCCACGACTATAACTTTTGAAGATTT TTTCGCAATGGTACGCAACGGACATTGGAAAGTGCCTACGGAAGGCCACCGCAGCTGTCTGGCAAAAGACCGCAAACACG ACGCGCAAACCATCAAAGACAGCATGGCATGTGTCATCCCCGCAGGCATATGCAAGAATGGACACGCAAAAAACAACCTT ACCTCCCTGTCACTCGCACTCTGCATCGACATCGACCATACGGACGAACAGACAAAGGATATTTTCGTACGTGCCTGCCT GCTCGAATACGTACTGGGAGCGTTTATCAGCATCTCCGGACGTGGTGTTAAGTTGTTCATTCGTATAGATATCGATGGAG TAAACGATTATCCTGCCATTTATGAAGCGACGGCAAAGCTCGTTTCCACCGTTCTCGGCGTAGAGAACGACGGGAAATGC AAGGATATCACCCATCCCTGCTTCGGATCATACGACCCGGACGCATACTACAACGGTGACGCAAAGGCCGTCAACGACTT TCTGCCGAACGGTGCACTCACTCTGCGCGTCACCTACGCTCCCGTCACTTCCGCTCCCCGTACCACCTGCACTCCCACCT CTTTCTCCAACGGACATCCGCCTGCGATGCCGGATAACCGGATTTCCGCCGCTCCCTTCGTACAGTCCTACCTCACCCTC TACCCTGCCGCAACGGGCGACCGGAACGGAACCGTTTTCCGGCTCAGCTGCGCTGCCTGCAAACGCGGCATCGACCGTAA CGAACTGACCACCGAATTGGTTCGCACCTTGGAAGAAGACAACTTCCGTGAGCCCGAAATCGCACGTACTGTAAAATCAG CTTACCAGAATGTAATGACTGCGGCAGAGACGGAAAGCTTCGAAAATCCTCCTTCAAATTCCAGTAAAGTCCAAAAGTCC GTTATAGGATTTTCAGAAAACGAAAATCCGGCAGAAAAGGAGGATGAAATCATCGGAGAAGAGCTCAGAGAGCAGACTCC GACCTTTCCTGACGAAATTTACGATCTCATTCCCGCCATCTTCAAGGAGTGCGTCTCCATCGCAAGAGATGAGCGTGAAA GGGACGGACTCTTGTTGTCATGTATTACCACGATAAGCAGCATGCTCCCCAGTGTAAGCATCCGCTACAACCGACGGAAT TATCAGCCCAATATCTACTGTATCGTCGTAGCTTCCTCCGGTGCCAACAAGAACCTCATCGGCTATGGCATACGCCTGCA CAAGCACTATTGTGAGTATTGGGAGAAGCAGAGTCTGAAGATCGAAAAGGAATACAAGAAAGCACTCAGGGACTACACCC TCTCCTTGCAGGCGATACGCAAAAAGAATACTGCTGCCACCAACCTGCCGGACGAACCGGAGGAGCCGAAGCTGGCATTT CCGCTGATCCCTGCCGACATCAGCCGTGCACAGCTCATCACTCACCTCATCAACAACCAAAGTTGTTCTTCCTTGCTCAC CAGTACCGAAGCCAGCAGCGTCAGCACAGCCCGCAACCAAGATTACGGACACTTCGACGATATCCTCTGCAAGGCATTCG AGCACGAACTGATCAGTTCGTCCTACAAGATCAACGGACGACATCCGCTGAAAGTGGAATATCCCTCCCTGTCGGCTTTT CTCACCGGCACTCCATCCAGCCTCATTTTATTCATCCCGACCATGGAGACAGGGCTGTACAACCGCTTTCTGATCAATAC CTTCAGACTTCCGGCAGCATGGCAGGATGTGTTCGCGGAGGAAAAGGTGCGGGCGGACGATCTCTTCAACGAGTTGTCCA TGCGCTTCGCACAGATGGCATTGTTTCTGAAAGATTCTCCTACGGAAGTAAAGCTGACAGATACACAGAAAAAAGAATTC AACCGGGTATTCACGCAACTGCTCAAAGATACGGACCAGTTAGGTAATGATGACCTGCTGGGGGTGGTGAAACGTTATGG AGTGATAACGGCACGCATCTGCTGCATTTTCTCCGCCATCGACAAGGGAACCATGAGAATGGAAACACCCGAAGTATACT GCTCGGACGCGCATTTCAAAGCAGCGCTCGCCATCGTGCTGTGTTGCTTCGAACATAGTAAACTGGTCAGTACTTCGGTA AAAAGCTCTGCCGAAGATACGAAACCATTACAATCGCCCGATAATCTCTCGCGACTTCTGACGAAACTCAAAAAGAGTTT TTCAGCCAAAGAAGCATGTGCTTTGGGAGAGGAATTGAACCTCTCAAGAAGCACCGTTTACTACTTATTGAATAAAGGCA TTAAAGCAGGGAGAATCAGCAAGTTAGGTCACGGTTCGTATATTCTGAAAATCTAA
Upstream 100 bases:
>100_bases ATAATCGATTTGGTAAAAAAAGAGAAGTTCCTACCTTCGCAGCCGGAAGCCCGTGATAACTACACCACCCGCTTCCGGCA ACTTATATATTATATTTCAA
Downstream 100 bases:
>100_bases TATGGACTTTCTGGACTTTACTGGACTTTGAAAGGGGAAATTCGTGACTTTTACTTCATTGTCACAAGAAAAAAACAATA AGTCTTATTAGCATATCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKDSMACVIPAGICKNGHAKNNL TSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISGRGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKC KDITHPCFGSYDPDAYYNGDAKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMTAAETESFENPPSNSSKVQKS VIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAIFKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRN YQPNIYCIVVASSGANKNLIGYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISSSYKINGRHPLKVEYPSLSAF LTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAEEKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEF NRVFTQLLKDTDQLGNDDLLGVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRISKLGHGSYILKI
Sequences:
>Translated_791_residues MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKDSMACVIPAGICKNGHAKNNL TSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISGRGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKC KDITHPCFGSYDPDAYYNGDAKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMTAAETESFENPPSNSSKVQKS VIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAIFKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRN YQPNIYCIVVASSGANKNLIGYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISSSYKINGRHPLKVEYPSLSAF LTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAEEKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEF NRVFTQLLKDTDQLGNDDLLGVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRISKLGHGSYILKI >Mature_791_residues MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKDSMACVIPAGICKNGHAKNNL TSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISGRGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKC KDITHPCFGSYDPDAYYNGDAKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMTAAETESFENPPSNSSKVQKS VIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAIFKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRN YQPNIYCIVVASSGANKNLIGYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISSSYKINGRHPLKVEYPSLSAF LTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAEEKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEF NRVFTQLLKDTDQLGNDDLLGVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRISKLGHGSYILKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88445; Mature: 88445
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKD CCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SMACVIPAGICKNGHAKNNLTSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISG HHHEEECHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECC RGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKCKDITHPCFGSYDPDAYYNGD CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCC AKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMT HCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAETESFENPPSNSSKVQKSVIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAI HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRNYQPNIYCIVVASSGANKNLI HHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCCEE GYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF EEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISS ECCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SYKINGRHPLKVEYPSLSAFLTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAE CEEECCCCCEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHH EKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEFNRVFTQLLKDTDQLGNDDLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHH GVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHCHHHHHHHH KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRIS HCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC KLGHGSYILKI CCCCCCEEEEC >Mature Secondary Structure MRKHMYQVSLFINTWSKTPTTITFEDFFAMVRNGHWKVPTEGHRSCLAKDRKHDAQTIKD CCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SMACVIPAGICKNGHAKNNLTSLSLALCIDIDHTDEQTKDIFVRACLLEYVLGAFISISG HHHEEECHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECC RGVKLFIRIDIDGVNDYPAIYEATAKLVSTVLGVENDGKCKDITHPCFGSYDPDAYYNGD CCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCC AKAVNDFLPNGALTLRVTYAPVTSAPRTTCTPTSFSNGHPPAMPDNRISAAPFVQSYLTL HHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH YPAATGDRNGTVFRLSCAACKRGIDRNELTTELVRTLEEDNFREPEIARTVKSAYQNVMT HCCCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AAETESFENPPSNSSKVQKSVIGFSENENPAEKEDEIIGEELREQTPTFPDEIYDLIPAI HHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FKECVSIARDERERDGLLLSCITTISSMLPSVSIRYNRRNYQPNIYCIVVASSGANKNLI HHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCCCEE GYGIRLHKHYCEYWEKQSLKIEKEYKKALRDYTLSLQAIRKKNTAATNLPDEPEEPKLAF EEHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE PLIPADISRAQLITHLINNQSCSSLLTSTEASSVSTARNQDYGHFDDILCKAFEHELISS ECCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC SYKINGRHPLKVEYPSLSAFLTGTPSSLILFIPTMETGLYNRFLINTFRLPAAWQDVFAE CEEECCCCCEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHH EKVRADDLFNELSMRFAQMALFLKDSPTEVKLTDTQKKEFNRVFTQLLKDTDQLGNDDLL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHH GVVKRYGVITARICCIFSAIDKGTMRMETPEVYCSDAHFKAALAIVLCCFEHSKLVSTSV HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHCHHHHHHHH KSSAEDTKPLQSPDNLSRLLTKLKKSFSAKEACALGEELNLSRSTVYYLLNKGIKAGRIS HCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC KLGHGSYILKI CCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA