| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346117
Identifier: 29346117
GI number: 29346117
Start: 880513
End: 881001
Strand: Reverse
Name: 29346117
Synonym: BT_0707
Alternate gene names: NA
Gene position: 881001-880513 (Counterclockwise)
Preceding gene: 29346119
Following gene: 29346116
Centisome position: 14.07
GC content: 55.21
Gene sequence:
>489_bases ATGGGTCGTAAAGACCCGCGAAAAATTGACGGGGTGCTGAAGTACCACCCCCAACTGGTGACGATGGGCCAAAGTGTAGA CCTTGACGGCATCGCCTACATCATGAAAGACAAGAGTTCCCTCTCCCTGGGCGACATCCAAAGCGTACTGACCAACTATG TGGAGGCAATGCGAGCGGCGCTCTTCGACGGAAAATCGGTCAATATCAGAGACTTCGGTGTATTCAGCCTATCCGCCCAT ACGCTGGGAGCAACCACGAAAGAAGAGTGTACGGTGAAGAATATCAAATCTATACAGATCAACTTCCGCCCTTCCAGCAG CGTCCGCCCCAACCTAACGTCTACCCGTGCCGGTGACAAGATCGAGTTTCTCGACCTCGAAGCCCCGAAAAAGAAGAAAG GCGACGGATCAGGAGAGGACAACACCCCCGGTGGCGGTGGAAACGAAGGCGGCGGAGGCGACGAGGAAGCTCCGGACCCG ACAGTGTAA
Upstream 100 bases:
>100_bases TTCTCTCTCCCGACACTGATCGAGTGACAGCAATCAGTAATTATTAATTTATATTTTTCTAAATCTTTAATTTATCATCA TGGCAATACCATTTAAAAGA
Downstream 100 bases:
>100_bases GAAGTGGAGAGTTGAGAGTTGGTAATCAATGTACGAGGGATTGATAGTTAGAATTAGTGGCTTTATGAGGAAGATTCATT TAATTGTGATTCACTGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MGRKDPRKIDGVLKYHPQLVTMGQSVDLDGIAYIMKDKSSLSLGDIQSVLTNYVEAMRAALFDGKSVNIRDFGVFSLSAH TLGATTKEECTVKNIKSIQINFRPSSSVRPNLTSTRAGDKIEFLDLEAPKKKKGDGSGEDNTPGGGGNEGGGGDEEAPDP TV
Sequences:
>Translated_162_residues MGRKDPRKIDGVLKYHPQLVTMGQSVDLDGIAYIMKDKSSLSLGDIQSVLTNYVEAMRAALFDGKSVNIRDFGVFSLSAH TLGATTKEECTVKNIKSIQINFRPSSSVRPNLTSTRAGDKIEFLDLEAPKKKKGDGSGEDNTPGGGGNEGGGGDEEAPDP TV >Mature_161_residues GRKDPRKIDGVLKYHPQLVTMGQSVDLDGIAYIMKDKSSLSLGDIQSVLTNYVEAMRAALFDGKSVNIRDFGVFSLSAHT LGATTKEECTVKNIKSIQINFRPSSSVRPNLTSTRAGDKIEFLDLEAPKKKKGDGSGEDNTPGGGGNEGGGGDEEAPDPT V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17274; Mature: 17142
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKDPRKIDGVLKYHPQLVTMGQSVDLDGIAYIMKDKSSLSLGDIQSVLTNYVEAMRAA CCCCCCHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LFDGKSVNIRDFGVFSLSAHTLGATTKEECTVKNIKSIQINFRPSSSVRPNLTSTRAGDK HHCCCCCCEEECCEEEECCHHCCCCCCCHHEECCCEEEEEEECCCCCCCCCCCCCCCCCE IEFLDLEAPKKKKGDGSGEDNTPGGGGNEGGGGDEEAPDPTV EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRKDPRKIDGVLKYHPQLVTMGQSVDLDGIAYIMKDKSSLSLGDIQSVLTNYVEAMRAA CCCCCHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LFDGKSVNIRDFGVFSLSAHTLGATTKEECTVKNIKSIQINFRPSSSVRPNLTSTRAGDK HHCCCCCCEEECCEEEECCHHCCCCCCCHHEECCCEEEEEEECCCCCCCCCCCCCCCCCE IEFLDLEAPKKKKGDGSGEDNTPGGGGNEGGGGDEEAPDPTV EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA