| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346049
Identifier: 29346049
GI number: 29346049
Start: 787476
End: 788102
Strand: Reverse
Name: 29346049
Synonym: BT_0639
Alternate gene names: NA
Gene position: 788102-787476 (Counterclockwise)
Preceding gene: 29346050
Following gene: 29346048
Centisome position: 12.59
GC content: 35.09
Gene sequence:
>627_bases ATGGACGCTTATAAATATCAGTTAGGTACTCTTTGTCTATTATTACTCCCCTTATCCGTAGCAGGACAAGAGTGGAGCAA ACAAGATTCATTGAGGCTACAGCAAACATTAAATTCTGAGCAAGAAATCAGAATCAATAAGGTATTCGTAAAGAAGACAG AACAAAACATGTTATATCATACAAAACCCTTTGTTGACTTTGATCCAACATTACCGATTCTTAAATCAACAATCATATCT CCGAAATTACCTTTTCATACTCATAACATCTTTCGACAGACCAATTCTACTTTCTTACCCACTTATTCACGGCTCAAAAT AAACAAAAATATCACTCTGCATAGTAAAAGTAACTTTAGTGAAAGTTCAAACCACTTTCATATCCAAACTCAAATGGATT ATAAGCTCTCTAAAAAATGGTTTCTTAGCATATATGGTAAACAAAATCTGGACACCCGAAGATATCGTGGACTTTCCTCT GAAGCAATACCAACCACACTAGGCAGCGACATTGTTTTAAAAGTAGGTAAAGGCTGGAAATTGAAAACCGGCGTACAATA TCAATACAACACCATACAAAAAAGATGGGAATGGGTGCCTCAGATCTGTATTTCTTATGAATGGTAA
Upstream 100 bases:
>100_bases GTATTCTCATATTATGTAAAATAGCTATTATTTATTCATTACATAAAGCAGCATTTTCACTTTTTCACCGTCCATAGAAT AAACTATACTAGCACACTAT
Downstream 100 bases:
>100_bases AAAAGGAATCACATGATAAACGATTTCATTTTCCATTTATTCTCGTACCTTTGTAGTACGATTAAAAAACATCCTATAAT AATGAAGAACTTTATCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MDAYKYQLGTLCLLLLPLSVAGQEWSKQDSLRLQQTLNSEQEIRINKVFVKKTEQNMLYHTKPFVDFDPTLPILKSTIIS PKLPFHTHNIFRQTNSTFLPTYSRLKINKNITLHSKSNFSESSNHFHIQTQMDYKLSKKWFLSIYGKQNLDTRRYRGLSS EAIPTTLGSDIVLKVGKGWKLKTGVQYQYNTIQKRWEWVPQICISYEW
Sequences:
>Translated_208_residues MDAYKYQLGTLCLLLLPLSVAGQEWSKQDSLRLQQTLNSEQEIRINKVFVKKTEQNMLYHTKPFVDFDPTLPILKSTIIS PKLPFHTHNIFRQTNSTFLPTYSRLKINKNITLHSKSNFSESSNHFHIQTQMDYKLSKKWFLSIYGKQNLDTRRYRGLSS EAIPTTLGSDIVLKVGKGWKLKTGVQYQYNTIQKRWEWVPQICISYEW >Mature_208_residues MDAYKYQLGTLCLLLLPLSVAGQEWSKQDSLRLQQTLNSEQEIRINKVFVKKTEQNMLYHTKPFVDFDPTLPILKSTIIS PKLPFHTHNIFRQTNSTFLPTYSRLKINKNITLHSKSNFSESSNHFHIQTQMDYKLSKKWFLSIYGKQNLDTRRYRGLSS EAIPTTLGSDIVLKVGKGWKLKTGVQYQYNTIQKRWEWVPQICISYEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24467; Mature: 24467
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAYKYQLGTLCLLLLPLSVAGQEWSKQDSLRLQQTLNSEQEIRINKVFVKKTEQNMLYH CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEE TKPFVDFDPTLPILKSTIISPKLPFHTHNIFRQTNSTFLPTYSRLKINKNITLHSKSNFS CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEECCCCC ESSNHFHIQTQMDYKLSKKWFLSIYGKQNLDTRRYRGLSSEAIPTTLGSDIVLKVGKGWK CCCCEEEEEEECCCEECCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEE LKTGVQYQYNTIQKRWEWVPQICISYEW EECCCEEHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure MDAYKYQLGTLCLLLLPLSVAGQEWSKQDSLRLQQTLNSEQEIRINKVFVKKTEQNMLYH CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEE TKPFVDFDPTLPILKSTIISPKLPFHTHNIFRQTNSTFLPTYSRLKINKNITLHSKSNFS CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEECCCCC ESSNHFHIQTQMDYKLSKKWFLSIYGKQNLDTRRYRGLSSEAIPTTLGSDIVLKVGKGWK CCCCEEEEEEECCCEECCEEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCEEEEECCCEE LKTGVQYQYNTIQKRWEWVPQICISYEW EECCCEEHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA