| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is glnA [H]
Identifier: 29345953
GI number: 29345953
Start: 667987
End: 670176
Strand: Reverse
Name: glnA [H]
Synonym: BT_0543
Alternate gene names: 29345953
Gene position: 670176-667987 (Counterclockwise)
Preceding gene: 29345954
Following gene: 29345951
Centisome position: 10.71
GC content: 47.31
Gene sequence:
>2190_bases ATGTCAAAACTAAGATTCAGAGTCGTAGAGACAGCTTTCAAGAAGAAAGCGGTTGAAGTAGCAACACCTGCCGAACGCCC TTCGGAATACTTCGGTAAGTATGTGTTCAACAAGGAAAAAATGTTCAAGTACCTTCCAAGCAAGGTATACAACGCACTGA TTGACGCTATTGACAATGGTGCCCCGCTAGACCGCAGCATCGCTGATGAAGTAGCTGCCGGAATGAAAAAATGGGCTGTC GAAATGGGTGTCACTCATTATACTCACTGGTTTGCACCGCTCACCGAAGGTACGGCAGAAAAGCATGACGCTTTCGTCGA ACATGACGGCAAGGGAGGCATGATGGAAGAGTTCACAGGCAAACTGCTGGTACAGCAGGAGCCGGATGCTTCTTCTTTCC CGAACGGCGGTATCCGTAATACTTTCGAAGCACGCGGATATAGCGCATGGGACCCATCATCACCCGCATTTATCGTAGAT GATACGCTTTGCATCCCGACTGTATTTATCGCATATACAGGTGAAGCCCTTGATTATAAAGCACCGTTACTGAAAGCTCT GCGTGCCGTAGATAAAGCCGCAACCGCCGTCTGCCACTATTTCAATCCTGAGGTAAAGAAGGTCGTTGCCTATCTGGGAT GGGAACAGGAATACTTTCTGGTAGATGAAGGTTTGTATGCCGCACGTCCGGACTTACTTATGACAGGACGCACATTGATG GGACATGACAGTGCCAAGAACCAGCAGTTGGAAGACCACTATTTCGGTGCCATCCCTACCCGTGTGGCCGCATTTATGAA AGACCTTGAAATTGAAGCGTTGAAACTGGGTATTCCTGTAAAGACCCGTCATAACGAGGTAGCTCCGAATCAATTCGAAT TAGCTCCTATCTTCGAAGAATGTAACCTGGCAAATGACCATAACCTACTGATCATGTCGTTGATGCGTAAAGTCAGCCGC CGTCACGGTTTCCGTGTATTGCTTCATGAAAAGCCGTTCAAGGGTGTCAACGGTTCCGGCAAGCACAATAACTGGTCACT GGGAACGGATACAGGTATCCTGTTGATGGGACCGGGCAAGACGCCGGAAGATAACCTGCGCTTTGTCACATTTGTAGTGA ATACGCTGATGGCAGTTTACCGTCACAACGGATTACTGAAAGCTTCTATTTCCAGCGCTACCAACGCTCATCGCCTGGGA GCCAATGAAGCACCTCCCGCTATCATTTCTTCTTTCCTCGGCAAACAGTTGTCACAGGTATTGGATCATATTGAGAACAG TACCAAAGACGATCTGATCAACCTTAGCGGAAAACAGGGAATGAAGCTGGATATTCCCCAAATCCCCGAATTGCTGATTG ATAATACAGACCGCAACCGCACCTCTCCTTTCGCTTTCACCGGAAACCGGTTTGAGTTCCGTGCCGTAGGCTCTGAGGCC AACTGTGCAAGTGCCATGATTGCATTAAACGCTGCCGTAGCAGAACAGCTGATGAAATTCAAAAAGGATGTAGACGCTCT GATCGAAAAGGGAGAACCGAAAGTTTCCGCTATCCTTGAAGTAATTCGCGGATATATCAAAGAATGTAAGGCTATCCACT TCGATGGCAACGGTTACAGCGACGAATGGAAAGTAGAAGCCGCCCGTCGAGGTCTGGACTGTGAAACAAGTGTTCCCGTT ATCTTCGACAACTATCTGAAACCGGAGACAATTGCTATGTTCGAAGCAATCGGTGTGATGACGAAAAAGGAACTGGAAGC CCGCAACGAAGTAAAATGGGAAACTTACACGAAAAAGATTCAGATTGAAGCCCGCGTATTAGGCGACCTGGCAATGAACC ACATTATTCCGGTCGCTACTCAATATCAGACGGATCTGATTAATAATGTCTATAAAATGCAGTCCTTATTTCCGGCAGAT AAAGCAGCCAGACTATCTGCCAAGAATCTGGAACTGATCGAAGAAATCGCCGACCGCACCGCCTTCATCAAAGAACACGT AGATGCAATGATTGAAGCACGAAAAGTGGCGAACAAGATCGAAAGCGAACGCGAAAAAGCGATCGCTTACCACGATACAA TCGTTCCGGCACTGGAAGAGATTCGTTACCATATTGACAAGCTGGAACTGATCGTAGACAACCAGATGTGGACACTGCCG AAATACAGAGAACTGTTGTTTGTAAGATAA
Upstream 100 bases:
>100_bases GAAGGTCTCGACATCTACGAACACGGAGAATCTGCTTATAACTAAGCTAAAAAAGGAATTTTTACTCTAACATATTTAAC AACAAATCAAATTAGGTATT
Downstream 100 bases:
>100_bases AAAAGAAATGCTGAATGGAGAATATCTTCATTCAGCATTAAGATAGAAATTATCTATTTCTTTTGTTGGTTGTTTTAAGT TTGCAGGGGAGGGGTACCGT
Product: glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MSKLRFRVVETAFKKKAVEVATPAERPSEYFGKYVFNKEKMFKYLPSKVYNALIDAIDNGAPLDRSIADEVAAGMKKWAV EMGVTHYTHWFAPLTEGTAEKHDAFVEHDGKGGMMEEFTGKLLVQQEPDASSFPNGGIRNTFEARGYSAWDPSSPAFIVD DTLCIPTVFIAYTGEALDYKAPLLKALRAVDKAATAVCHYFNPEVKKVVAYLGWEQEYFLVDEGLYAARPDLLMTGRTLM GHDSAKNQQLEDHYFGAIPTRVAAFMKDLEIEALKLGIPVKTRHNEVAPNQFELAPIFEECNLANDHNLLIMSLMRKVSR RHGFRVLLHEKPFKGVNGSGKHNNWSLGTDTGILLMGPGKTPEDNLRFVTFVVNTLMAVYRHNGLLKASISSATNAHRLG ANEAPPAIISSFLGKQLSQVLDHIENSTKDDLINLSGKQGMKLDIPQIPELLIDNTDRNRTSPFAFTGNRFEFRAVGSEA NCASAMIALNAAVAEQLMKFKKDVDALIEKGEPKVSAILEVIRGYIKECKAIHFDGNGYSDEWKVEAARRGLDCETSVPV IFDNYLKPETIAMFEAIGVMTKKELEARNEVKWETYTKKIQIEARVLGDLAMNHIIPVATQYQTDLINNVYKMQSLFPAD KAARLSAKNLELIEEIADRTAFIKEHVDAMIEARKVANKIESEREKAIAYHDTIVPALEEIRYHIDKLELIVDNQMWTLP KYRELLFVR
Sequences:
>Translated_729_residues MSKLRFRVVETAFKKKAVEVATPAERPSEYFGKYVFNKEKMFKYLPSKVYNALIDAIDNGAPLDRSIADEVAAGMKKWAV EMGVTHYTHWFAPLTEGTAEKHDAFVEHDGKGGMMEEFTGKLLVQQEPDASSFPNGGIRNTFEARGYSAWDPSSPAFIVD DTLCIPTVFIAYTGEALDYKAPLLKALRAVDKAATAVCHYFNPEVKKVVAYLGWEQEYFLVDEGLYAARPDLLMTGRTLM GHDSAKNQQLEDHYFGAIPTRVAAFMKDLEIEALKLGIPVKTRHNEVAPNQFELAPIFEECNLANDHNLLIMSLMRKVSR RHGFRVLLHEKPFKGVNGSGKHNNWSLGTDTGILLMGPGKTPEDNLRFVTFVVNTLMAVYRHNGLLKASISSATNAHRLG ANEAPPAIISSFLGKQLSQVLDHIENSTKDDLINLSGKQGMKLDIPQIPELLIDNTDRNRTSPFAFTGNRFEFRAVGSEA NCASAMIALNAAVAEQLMKFKKDVDALIEKGEPKVSAILEVIRGYIKECKAIHFDGNGYSDEWKVEAARRGLDCETSVPV IFDNYLKPETIAMFEAIGVMTKKELEARNEVKWETYTKKIQIEARVLGDLAMNHIIPVATQYQTDLINNVYKMQSLFPAD KAARLSAKNLELIEEIADRTAFIKEHVDAMIEARKVANKIESEREKAIAYHDTIVPALEEIRYHIDKLELIVDNQMWTLP KYRELLFVR >Mature_728_residues SKLRFRVVETAFKKKAVEVATPAERPSEYFGKYVFNKEKMFKYLPSKVYNALIDAIDNGAPLDRSIADEVAAGMKKWAVE MGVTHYTHWFAPLTEGTAEKHDAFVEHDGKGGMMEEFTGKLLVQQEPDASSFPNGGIRNTFEARGYSAWDPSSPAFIVDD TLCIPTVFIAYTGEALDYKAPLLKALRAVDKAATAVCHYFNPEVKKVVAYLGWEQEYFLVDEGLYAARPDLLMTGRTLMG HDSAKNQQLEDHYFGAIPTRVAAFMKDLEIEALKLGIPVKTRHNEVAPNQFELAPIFEECNLANDHNLLIMSLMRKVSRR HGFRVLLHEKPFKGVNGSGKHNNWSLGTDTGILLMGPGKTPEDNLRFVTFVVNTLMAVYRHNGLLKASISSATNAHRLGA NEAPPAIISSFLGKQLSQVLDHIENSTKDDLINLSGKQGMKLDIPQIPELLIDNTDRNRTSPFAFTGNRFEFRAVGSEAN CASAMIALNAAVAEQLMKFKKDVDALIEKGEPKVSAILEVIRGYIKECKAIHFDGNGYSDEWKVEAARRGLDCETSVPVI FDNYLKPETIAMFEAIGVMTKKELEARNEVKWETYTKKIQIEARVLGDLAMNHIIPVATQYQTDLINNVYKMQSLFPADK AARLSAKNLELIEEIADRTAFIKEHVDAMIEARKVANKIESEREKAIAYHDTIVPALEEIRYHIDKLELIVDNQMWTLPK YRELLFVR
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 81904; Mature: 81773
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLRFRVVETAFKKKAVEVATPAERPSEYFGKYVFNKEKMFKYLPSKVYNALIDAIDNG CCCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC APLDRSIADEVAAGMKKWAVEMGVTHYTHWFAPLTEGTAEKHDAFVEHDGKGGMMEEFTG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCHHEEECCCCCCHHHHCC KLLVQQEPDASSFPNGGIRNTFEARGYSAWDPSSPAFIVDDTLCIPTVFIAYTGEALDYK CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCH APLLKALRAVDKAATAVCHYFNPEVKKVVAYLGWEQEYFLVDEGLYAARPDLLMTGRTLM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCHHC GHDSAKNQQLEDHYFGAIPTRVAAFMKDLEIEALKLGIPVKTRHNEVAPNQFELAPIFEE CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCEEECCHHHH CNLANDHNLLIMSLMRKVSRRHGFRVLLHEKPFKGVNGSGKHNNWSLGTDTGILLMGPGK CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCC TPEDNLRFVTFVVNTLMAVYRHNGLLKASISSATNAHRLGANEAPPAIISSFLGKQLSQV CCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHH LDHIENSTKDDLINLSGKQGMKLDIPQIPELLIDNTDRNRTSPFAFTGNRFEFRAVGSEA HHHHHCCCCCCEEECCCCCCCEECCCCCCHHHHCCCCCCCCCCEEEECCCEEEEECCCCC NCASAMIALNAAVAEQLMKFKKDVDALIEKGEPKVSAILEVIRGYIKECKAIHFDGNGYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC DEWKVEAARRGLDCETSVPVIFDNYLKPETIAMFEAIGVMTKKELEARNEVKWETYTKKI CHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEE QIEARVLGDLAMNHIIPVATQYQTDLINNVYKMQSLFPADKAARLSAKNLELIEEIADRT EEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH AFIKEHVDAMIEARKVANKIESEREKAIAYHDTIVPALEEIRYHIDKLELIVDNQMWTLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCC KYRELLFVR HHHHHHCCC >Mature Secondary Structure SKLRFRVVETAFKKKAVEVATPAERPSEYFGKYVFNKEKMFKYLPSKVYNALIDAIDNG CCHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCC APLDRSIADEVAAGMKKWAVEMGVTHYTHWFAPLTEGTAEKHDAFVEHDGKGGMMEEFTG CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHCHHEEECCCCCCHHHHCC KLLVQQEPDASSFPNGGIRNTFEARGYSAWDPSSPAFIVDDTLCIPTVFIAYTGEALDYK CEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCH APLLKALRAVDKAATAVCHYFNPEVKKVVAYLGWEQEYFLVDEGLYAARPDLLMTGRTLM HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCHHC GHDSAKNQQLEDHYFGAIPTRVAAFMKDLEIEALKLGIPVKTRHNEVAPNQFELAPIFEE CCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCEEECCHHHH CNLANDHNLLIMSLMRKVSRRHGFRVLLHEKPFKGVNGSGKHNNWSLGTDTGILLMGPGK CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCC TPEDNLRFVTFVVNTLMAVYRHNGLLKASISSATNAHRLGANEAPPAIISSFLGKQLSQV CCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHH LDHIENSTKDDLINLSGKQGMKLDIPQIPELLIDNTDRNRTSPFAFTGNRFEFRAVGSEA HHHHHCCCCCCEEECCCCCCCEECCCCCCHHHHCCCCCCCCCCEEEECCCEEEEECCCCC NCASAMIALNAAVAEQLMKFKKDVDALIEKGEPKVSAILEVIRGYIKECKAIHFDGNGYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC DEWKVEAARRGLDCETSVPVIFDNYLKPETIAMFEAIGVMTKKELEARNEVKWETYTKKI CHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEE QIEARVLGDLAMNHIIPVATQYQTDLINNVYKMQSLFPADKAARLSAKNLELIEEIADRT EEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHH AFIKEHVDAMIEARKVANKIESEREKAIAYHDTIVPALEEIRYHIDKLELIVDNQMWTLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEECCC KYRELLFVR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]