Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345935

Identifier: 29345935

GI number: 29345935

Start: 647028

End: 649490

Strand: Reverse

Name: 29345935

Synonym: BT_0525

Alternate gene names: NA

Gene position: 649490-647028 (Counterclockwise)

Preceding gene: 29345936

Following gene: 29345934

Centisome position: 10.37

GC content: 35.93

Gene sequence:

>2463_bases
ATGATGAAAAAAACAATTCTGCTTACATCTATTATTGCGATAGCAATAGTAAGCATGTTATCCAGTTGCGTAGATTCCGA
GAAGGATCTATATGATCCGTCTTATCAGACAGCCAATCCAATGGGAGACGGTTTTGCTGCACCGGATGGATTTGACTGGA
ATATGACTACAACTAGTATTCTAAACATAGAAATTGATGATGAACTTTACAACCAAATAGAAATATTGGACGCAAATCCA
TTTTCAACGTCTGATTACCATATACTTGCCAAAGGAGTTGCCAAGAAAGGTCAAGCTTTTTCACAAGAAATAAATTATAC
AGAAGGAACTAATTACCTATATATTCGTAAGACAGACTCTAGAAGCAGAGTGTCTATTAGTACATGGGATGTATCTAAAA
ATAAAGAATTTGTAGGTTCAAGGACTACAAGAGTTGCAAAAGCGACCATCGGAAGCTATAATATTCCAGAAAAATATCCC
GAAGAAACTTATGATACCACAGGAGCTATTGAACTTACAGGTAATACTAATTGGAATCAATCAAATCATCATTTGGAAGC
AGGCAAAAGCTATATCATAAAAAACAAATTTAATGGTGAAATCAACCATACCAGTGGATATTTGAATGGCGGAAGATTTA
CCATATTTGTAGAAGGTGAATGGACACCCTCGCAAAACCAAATACAAAGTGCAGATATTATTATTTTGAAGGGTGGAAAA
ATCAACACCGATTCATTCACGAGTTTTCTTATTGCTGACAACTCAATATTAACGATTCAATCAGGCGGAAGTCTTATTGG
CAATAACATCAATCTTGCTGCCATAGGAGTATTACTGAAAAATTTTGGAACAATTAGTGTCAATAGTATGAAGGACTTGA
ATACGACGTCTATTTTATACAATGCTCCTAAAGCCACAATTAATGTTACAGGAAAATCTGTTGCTTCTTGGGAACAGTCC
GTATTTACCAAAGGAGCTATTTATAACTTTGGAGAATTGACTATTCAAGAAGGTGCATTAAAGTTTAATTCTCAAGATGC
AACATGCTATTTTTATAATGGAACTGAAGCAACAATTAATACTCCAACTTTCATTATAGGTGGGATTGGTGTAAATGATG
GAACTGTTAATGCTCAAAAAATAAGTAATGATAATGGCGGTAACCCTACTTTTACTAATAATTGCAGTCTTTATGCCCAA
AATTCTTTCGAATTCGGAGGAACAAGCGGAACTATCATAATGAATAAAGGTATATTGGCTGGTGGCGTAGAAAATGGTAC
TTTTATAGCTATTCCATCTTTTAAATGCGGTAATAGCGGAAGCACTTTTGAACTGAATAATGGTTCTATGATAAAAGCAG
AGATAATGGATATTCCTAATGTCACTTTTAAAGCTGCCGGAACTCGTTCATTAATAAAATCCACAAAAAGCATATCTACT
GGTTGGACAACTAAGTTCAATGGTAATTTGGATATTGAATGCCCGGAAGGGGAATTCGCCAAAGGGGTACCTGCCAATAA
CCCTAATTACATTATGGAAAATTCAGTAGAATTATATATCCCGAATGGTTCCAAAACAATCATTACTTCATGTGGTGAAC
TTTCAGAAATACCTGACCCTACCCCTGACCCGGAAGATCCTGAATTCCCTATTGAAGTGGAAGACAACAAAGATTATACT
TACCTCTTCGAAGACCAATGGCCACTATATGGAGATTATGATATGAATGATATCGTTCTGACCATTCAGAAAAGGAAAAT
ATATACTAATAAAGAGAATAAAGTAACAAAATTCGAGTTAAGTATTGACTTATCCGCAGCCGGAGCAACCAAAAGCATCG
GAGCAGCTATTATGCTGGACAATGTACCCGCCAATGCCATTACACAGTCAGTTGAATTCAGTGACAATACTCTTGCCAAG
AATTTCAATCTAAATAATAACAATATCGAAAGTGGTCAGGATTATGCTGTGATTCCTCTGTTTGATGATGCTCATAAAGT
ATTGGGAAGAGATCGGTATGAGCAGATTAATACTGTCTCAGACTATGCAGGCAATACCAAACCTAAGAATATCAGTTTCT
CCATTACCTTCAATAATCCGACAATATCAGCAGATGCTTTTAATGTCAACAATTTGAATGTCTTTATCATCGTAGACGGC
AACAGAAACCCACGTAAGGAAATACATGTTGCAGGCTATCAACCAACCAAACTCGCAAACACCGATCTGTTTGGCGGAAA
CAACGATAACAGTCATCATGGCAGCAAAAAATATTATATCAGTAAAGAGAATCTGGCATGGGGTATCATGGTTCCTTCCA
ATTTCAAATGGCCTTTAGAGTATGTAAATATCAAAACTGCTTATTCACAATTCAGCGACTGGGTAACGAGCGGTGGTACA
GAAAATGAAAAATGGTGGAATGATTTTGATGTAAACAAGGTATTCCAAACAAATAAAAACTAA

Upstream 100 bases:

>100_bases
TCGTTGCTTTTTACACAAGAAATATCAATAAATACATCTTTAATCCAAAATATACAACTATCTTTGCAGCAAACAAAAAA
ACAATCAAACAATAGACATT

Downstream 100 bases:

>100_bases
TCTCCCTTATCAACACGGATTTCATAAAAAAAATGAAATCCGTGTTTTTTTCCTCACTAAATGTATCAGATATATTCTAT
TAATAAATAAAAATAATAAT

Product: outer membrane protein, function unknown

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 820; Mature: 820

Protein sequence:

>820_residues
MMKKTILLTSIIAIAIVSMLSSCVDSEKDLYDPSYQTANPMGDGFAAPDGFDWNMTTTSILNIEIDDELYNQIEILDANP
FSTSDYHILAKGVAKKGQAFSQEINYTEGTNYLYIRKTDSRSRVSISTWDVSKNKEFVGSRTTRVAKATIGSYNIPEKYP
EETYDTTGAIELTGNTNWNQSNHHLEAGKSYIIKNKFNGEINHTSGYLNGGRFTIFVEGEWTPSQNQIQSADIIILKGGK
INTDSFTSFLIADNSILTIQSGGSLIGNNINLAAIGVLLKNFGTISVNSMKDLNTTSILYNAPKATINVTGKSVASWEQS
VFTKGAIYNFGELTIQEGALKFNSQDATCYFYNGTEATINTPTFIIGGIGVNDGTVNAQKISNDNGGNPTFTNNCSLYAQ
NSFEFGGTSGTIIMNKGILAGGVENGTFIAIPSFKCGNSGSTFELNNGSMIKAEIMDIPNVTFKAAGTRSLIKSTKSIST
GWTTKFNGNLDIECPEGEFAKGVPANNPNYIMENSVELYIPNGSKTIITSCGELSEIPDPTPDPEDPEFPIEVEDNKDYT
YLFEDQWPLYGDYDMNDIVLTIQKRKIYTNKENKVTKFELSIDLSAAGATKSIGAAIMLDNVPANAITQSVEFSDNTLAK
NFNLNNNNIESGQDYAVIPLFDDAHKVLGRDRYEQINTVSDYAGNTKPKNISFSITFNNPTISADAFNVNNLNVFIIVDG
NRNPRKEIHVAGYQPTKLANTDLFGGNNDNSHHGSKKYYISKENLAWGIMVPSNFKWPLEYVNIKTAYSQFSDWVTSGGT
ENEKWWNDFDVNKVFQTNKN

Sequences:

>Translated_820_residues
MMKKTILLTSIIAIAIVSMLSSCVDSEKDLYDPSYQTANPMGDGFAAPDGFDWNMTTTSILNIEIDDELYNQIEILDANP
FSTSDYHILAKGVAKKGQAFSQEINYTEGTNYLYIRKTDSRSRVSISTWDVSKNKEFVGSRTTRVAKATIGSYNIPEKYP
EETYDTTGAIELTGNTNWNQSNHHLEAGKSYIIKNKFNGEINHTSGYLNGGRFTIFVEGEWTPSQNQIQSADIIILKGGK
INTDSFTSFLIADNSILTIQSGGSLIGNNINLAAIGVLLKNFGTISVNSMKDLNTTSILYNAPKATINVTGKSVASWEQS
VFTKGAIYNFGELTIQEGALKFNSQDATCYFYNGTEATINTPTFIIGGIGVNDGTVNAQKISNDNGGNPTFTNNCSLYAQ
NSFEFGGTSGTIIMNKGILAGGVENGTFIAIPSFKCGNSGSTFELNNGSMIKAEIMDIPNVTFKAAGTRSLIKSTKSIST
GWTTKFNGNLDIECPEGEFAKGVPANNPNYIMENSVELYIPNGSKTIITSCGELSEIPDPTPDPEDPEFPIEVEDNKDYT
YLFEDQWPLYGDYDMNDIVLTIQKRKIYTNKENKVTKFELSIDLSAAGATKSIGAAIMLDNVPANAITQSVEFSDNTLAK
NFNLNNNNIESGQDYAVIPLFDDAHKVLGRDRYEQINTVSDYAGNTKPKNISFSITFNNPTISADAFNVNNLNVFIIVDG
NRNPRKEIHVAGYQPTKLANTDLFGGNNDNSHHGSKKYYISKENLAWGIMVPSNFKWPLEYVNIKTAYSQFSDWVTSGGT
ENEKWWNDFDVNKVFQTNKN
>Mature_820_residues
MMKKTILLTSIIAIAIVSMLSSCVDSEKDLYDPSYQTANPMGDGFAAPDGFDWNMTTTSILNIEIDDELYNQIEILDANP
FSTSDYHILAKGVAKKGQAFSQEINYTEGTNYLYIRKTDSRSRVSISTWDVSKNKEFVGSRTTRVAKATIGSYNIPEKYP
EETYDTTGAIELTGNTNWNQSNHHLEAGKSYIIKNKFNGEINHTSGYLNGGRFTIFVEGEWTPSQNQIQSADIIILKGGK
INTDSFTSFLIADNSILTIQSGGSLIGNNINLAAIGVLLKNFGTISVNSMKDLNTTSILYNAPKATINVTGKSVASWEQS
VFTKGAIYNFGELTIQEGALKFNSQDATCYFYNGTEATINTPTFIIGGIGVNDGTVNAQKISNDNGGNPTFTNNCSLYAQ
NSFEFGGTSGTIIMNKGILAGGVENGTFIAIPSFKCGNSGSTFELNNGSMIKAEIMDIPNVTFKAAGTRSLIKSTKSIST
GWTTKFNGNLDIECPEGEFAKGVPANNPNYIMENSVELYIPNGSKTIITSCGELSEIPDPTPDPEDPEFPIEVEDNKDYT
YLFEDQWPLYGDYDMNDIVLTIQKRKIYTNKENKVTKFELSIDLSAAGATKSIGAAIMLDNVPANAITQSVEFSDNTLAK
NFNLNNNNIESGQDYAVIPLFDDAHKVLGRDRYEQINTVSDYAGNTKPKNISFSITFNNPTISADAFNVNNLNVFIIVDG
NRNPRKEIHVAGYQPTKLANTDLFGGNNDNSHHGSKKYYISKENLAWGIMVPSNFKWPLEYVNIKTAYSQFSDWVTSGGT
ENEKWWNDFDVNKVFQTNKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90201; Mature: 90201

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTILLTSIIAIAIVSMLSSCVDSEKDLYDPSYQTANPMGDGFAAPDGFDWNMTTTSI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LNIEIDDELYNQIEILDANPFSTSDYHILAKGVAKKGQAFSQEINYTEGTNYLYIRKTDS
EEEEECHHHCCEEEEEECCCCCCCCEEEEEECHHHCCCHHHHHCCCCCCCCEEEEEECCC
RSRVSISTWDVSKNKEFVGSRTTRVAKATIGSYNIPEKYPEETYDTTGAIELTGNTNWNQ
CCEEEEEEEECCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SNHHLEAGKSYIIKNKFNGEINHTSGYLNGGRFTIFVEGEWTPSQNQIQSADIIILKGGK
CCCEECCCCEEEEEECCCCEEECCCCEECCCEEEEEEEECCCCCCCCCCCCCEEEEECCE
INTDSFTSFLIADNSILTIQSGGSLIGNNINLAAIGVLLKNFGTISVNSMKDLNTTSILY
ECCCCCEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEE
NAPKATINVTGKSVASWEQSVFTKGAIYNFGELTIQEGALKFNSQDATCYFYNGTEATIN
ECCCEEEEECCCCHHHHHHHHHCCCCEEECCEEEEECCEEEECCCCCEEEEECCCEEEEC
TPTFIIGGIGVNDGTVNAQKISNDNGGNPTFTNNCSLYAQNSFEFGGTSGTIIMNKGILA
CCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCCEECCCCCCEEEEECCEEE
GGVENGTFIAIPSFKCGNSGSTFELNNGSMIKAEIMDIPNVTFKAAGTRSLIKSTKSIST
CCCCCCEEEEECCEEECCCCCEEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHCCCC
GWTTKFNGNLDIECPEGEFAKGVPANNPNYIMENSVELYIPNGSKTIITSCGELSEIPDP
CCEEEECCCEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEECCCHHCCCCC
TPDPEDPEFPIEVEDNKDYTYLFEDQWPLYGDYDMNDIVLTIQKRKIYTNKENKVTKFEL
CCCCCCCCCCEEEECCCCEEEEECCCCCEECCCCCCEEEEEEEEEEEEECCCCCEEEEEE
SIDLSAAGATKSIGAAIMLDNVPANAITQSVEFSDNTLAKNFNLNNNNIESGQDYAVIPL
EEEEECCCCCCCCCEEEEECCCCHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEE
FDDAHKVLGRDRYEQINTVSDYAGNTKPKNISFSITFNNPTISADAFNVNNLNVFIIVDG
ECCHHHHHCCHHHHHHCCHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCEEEEEEEEC
NRNPRKEIHVAGYQPTKLANTDLFGGNNDNSHHGSKKYYISKENLAWGIMVPSNFKWPLE
CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEE
YVNIKTAYSQFSDWVTSGGTENEKWWNDFDVNKVFQTNKN
EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure
MMKKTILLTSIIAIAIVSMLSSCVDSEKDLYDPSYQTANPMGDGFAAPDGFDWNMTTTSI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LNIEIDDELYNQIEILDANPFSTSDYHILAKGVAKKGQAFSQEINYTEGTNYLYIRKTDS
EEEEECHHHCCEEEEEECCCCCCCCEEEEEECHHHCCCHHHHHCCCCCCCCEEEEEECCC
RSRVSISTWDVSKNKEFVGSRTTRVAKATIGSYNIPEKYPEETYDTTGAIELTGNTNWNQ
CCEEEEEEEECCCCCHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
SNHHLEAGKSYIIKNKFNGEINHTSGYLNGGRFTIFVEGEWTPSQNQIQSADIIILKGGK
CCCEECCCCEEEEEECCCCEEECCCCEECCCEEEEEEEECCCCCCCCCCCCCEEEEECCE
INTDSFTSFLIADNSILTIQSGGSLIGNNINLAAIGVLLKNFGTISVNSMKDLNTTSILY
ECCCCCEEEEEECCCEEEEECCCCEECCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEE
NAPKATINVTGKSVASWEQSVFTKGAIYNFGELTIQEGALKFNSQDATCYFYNGTEATIN
ECCCEEEEECCCCHHHHHHHHHCCCCEEECCEEEEECCEEEECCCCCEEEEECCCEEEEC
TPTFIIGGIGVNDGTVNAQKISNDNGGNPTFTNNCSLYAQNSFEFGGTSGTIIMNKGILA
CCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEEECCCEECCCCCCEEEEECCEEE
GGVENGTFIAIPSFKCGNSGSTFELNNGSMIKAEIMDIPNVTFKAAGTRSLIKSTKSIST
CCCCCCEEEEECCEEECCCCCEEEECCCCEEEEEEECCCCCEEECCCCHHHHHHHHCCCC
GWTTKFNGNLDIECPEGEFAKGVPANNPNYIMENSVELYIPNGSKTIITSCGELSEIPDP
CCEEEECCCEEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEECCCHHCCCCC
TPDPEDPEFPIEVEDNKDYTYLFEDQWPLYGDYDMNDIVLTIQKRKIYTNKENKVTKFEL
CCCCCCCCCCEEEECCCCEEEEECCCCCEECCCCCCEEEEEEEEEEEEECCCCCEEEEEE
SIDLSAAGATKSIGAAIMLDNVPANAITQSVEFSDNTLAKNFNLNNNNIESGQDYAVIPL
EEEEECCCCCCCCCEEEEECCCCHHHHHEEEECCCCEEEEEECCCCCCCCCCCCEEEEEE
FDDAHKVLGRDRYEQINTVSDYAGNTKPKNISFSITFNNPTISADAFNVNNLNVFIIVDG
ECCHHHHHCCHHHHHHCCHHHHCCCCCCCEEEEEEEECCCEEEEEEEECCCEEEEEEEEC
NRNPRKEIHVAGYQPTKLANTDLFGGNNDNSHHGSKKYYISKENLAWGIMVPSNFKWPLE
CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEE
YVNIKTAYSQFSDWVTSGGTENEKWWNDFDVNKVFQTNKN
EEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA