| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is iorA [H]
Identifier: 29345840
GI number: 29345840
Start: 516457
End: 518049
Strand: Reverse
Name: iorA [H]
Synonym: BT_0430
Alternate gene names: 29345840
Gene position: 518049-516457 (Counterclockwise)
Preceding gene: 29345841
Following gene: 29345839
Centisome position: 8.28
GC content: 48.27
Gene sequence:
>1593_bases ATGAGCAAGCAACTCTTACTTGGCGATGAAGCCATTGCACAAGCTGCACTGGATGCCGGACTTTCAGGTGTATATGCCTA CCCCGGTACTCCTTCAACTGAGATTACTGAATATATCCAAATGGCGCCTATAACCACTGAGCAGAACATACATAATCGTT GGTGTGCCAACGAAAAAACTGCCATGGAAGCCGCACTGGGTATGTCATTTGTAGGCAAACGCGCCTTAGTGTGCATGAAG CATGTAGGCATGAATGTGGCTGCAGACTGTTTCGTCAATTCTGCCATCACGGGTGTGAAGGGAGGACTGATTGTGATAGC GGCAGACGACCCCAGCATGCACTCTTCACAGAATGAACAGGACAGCCGCTTCTACGGAGACTTCTCCCTGATACCGATGT ACGAGCCCAGCAACCAACAGGAAGCATACGACATGGTATACAACGGATTCGAATTCTCTGAGAAAACAGGCGAACCGATC TTAATGCGTATGGTCACCCGCCTCGCACACTCCCGTTCCGGAGTAGAGCGCAAAGAGCAGAAGCCACAGAACAGCATTTC ATTCAGTGAAGATCCCCGTCAGTTTATCCTGTTGCCGGGAAATGCCCGCAAACGCTATAAAGTATTGCTTGCCCGCCAGG ACGAATTCATCAAAGCTTCCGAGGAATCTCCTTACAACAAATACATAGACGGCCCTAACAAAAAACTGGGAATCGTCGCT TGCGGTATCGGCTACAATTATCTGATGGAAAACTATCCGGAAGGTTGTGAATACCCGGTACTTAAGATCGGCCAGTATCC ATTGCCTAAAAAGCAATTGCTGCAATTGGTTGAATCCTGCGACGAGATTCTGGTACTGGAAGACGGACAGCCATTCGTTG AAAAACATCTGAAAGGCTATCTGGGCATTGGTATCAAAGTAAAAGGACGTCTGGACGGCACACTATCACAAGACGGAGAA TTAAATCCGGACTCTGTAGCACGCGCGGTCGGCAAAGAAAACAAATCGGAATTCGGCGTCCCTTCTGTAGTCGAAATGCG TCCTCCCGCACTGTGTGAAGGATGCGGACACCGTGATATGTACATCACACTGACAGAAGTACTCAAAGAAGAATATCCTT CCCATAAAGTATTCAGCGACATCGGTTGCTATACGCTGGGAGCCAACGCTCCGTTCAACGCCATCAATTCATGCGTAGAC ATGGGAGCTTCCATCACAATGGCGAAAGGTGCGGCCGACGGAGGTCTTCATCCGTCCGTAGCTGTAATCGGTGACTCTAC ATTTACTCACTCCGGAATGACAGGTTTACTGGATTGCGTCAACGAAAATGCCAATGTCGTTATTGTCATTTCAGACAATG AGACAACAGCAATGACCGGTGGTCAGGACTCTGCGGGCACAGGACGTATTGAATCCATCTGTATCGGTTTAGGAGTCGAC CCTGCCCATATCCGTGTCGTTGTTCCATTGAAGAAGAACCACGAGGAAATGAGACAGATCATACGCGAAGAAATCGAATA CAATGGCGTATCCGTTATCATCCCGCGCAGAGAGTGTATTCAAACATTAGCACGCAAAAAAAGAAGTAAGTAA
Upstream 100 bases:
>100_bases AAAGAAAGATTTTCAAGTAATTTTGTGATAAAACGAGCCAAAAAGGCTATCTTTGCCCGATATAATAACAAACTGTGATC AACACTAATAAAGGAAATAT
Downstream 100 bases:
>100_bases GCCATGAAAAAAGACATTATATTATCAGGAGTAGGTGGACAGGGTATTTTGTCCATCGCTACAGTTATTGGTAAAGCTGC TTTGAAAGAAGGACTTTACA
Product: indolepyruvate oxidoreductase subunit iorA
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MSKQLLLGDEAIAQAALDAGLSGVYAYPGTPSTEITEYIQMAPITTEQNIHNRWCANEKTAMEAALGMSFVGKRALVCMK HVGMNVAADCFVNSAITGVKGGLIVIAADDPSMHSSQNEQDSRFYGDFSLIPMYEPSNQQEAYDMVYNGFEFSEKTGEPI LMRMVTRLAHSRSGVERKEQKPQNSISFSEDPRQFILLPGNARKRYKVLLARQDEFIKASEESPYNKYIDGPNKKLGIVA CGIGYNYLMENYPEGCEYPVLKIGQYPLPKKQLLQLVESCDEILVLEDGQPFVEKHLKGYLGIGIKVKGRLDGTLSQDGE LNPDSVARAVGKENKSEFGVPSVVEMRPPALCEGCGHRDMYITLTEVLKEEYPSHKVFSDIGCYTLGANAPFNAINSCVD MGASITMAKGAADGGLHPSVAVIGDSTFTHSGMTGLLDCVNENANVVIVISDNETTAMTGGQDSAGTGRIESICIGLGVD PAHIRVVVPLKKNHEEMRQIIREEIEYNGVSVIIPRRECIQTLARKKRSK
Sequences:
>Translated_530_residues MSKQLLLGDEAIAQAALDAGLSGVYAYPGTPSTEITEYIQMAPITTEQNIHNRWCANEKTAMEAALGMSFVGKRALVCMK HVGMNVAADCFVNSAITGVKGGLIVIAADDPSMHSSQNEQDSRFYGDFSLIPMYEPSNQQEAYDMVYNGFEFSEKTGEPI LMRMVTRLAHSRSGVERKEQKPQNSISFSEDPRQFILLPGNARKRYKVLLARQDEFIKASEESPYNKYIDGPNKKLGIVA CGIGYNYLMENYPEGCEYPVLKIGQYPLPKKQLLQLVESCDEILVLEDGQPFVEKHLKGYLGIGIKVKGRLDGTLSQDGE LNPDSVARAVGKENKSEFGVPSVVEMRPPALCEGCGHRDMYITLTEVLKEEYPSHKVFSDIGCYTLGANAPFNAINSCVD MGASITMAKGAADGGLHPSVAVIGDSTFTHSGMTGLLDCVNENANVVIVISDNETTAMTGGQDSAGTGRIESICIGLGVD PAHIRVVVPLKKNHEEMRQIIREEIEYNGVSVIIPRRECIQTLARKKRSK >Mature_529_residues SKQLLLGDEAIAQAALDAGLSGVYAYPGTPSTEITEYIQMAPITTEQNIHNRWCANEKTAMEAALGMSFVGKRALVCMKH VGMNVAADCFVNSAITGVKGGLIVIAADDPSMHSSQNEQDSRFYGDFSLIPMYEPSNQQEAYDMVYNGFEFSEKTGEPIL MRMVTRLAHSRSGVERKEQKPQNSISFSEDPRQFILLPGNARKRYKVLLARQDEFIKASEESPYNKYIDGPNKKLGIVAC GIGYNYLMENYPEGCEYPVLKIGQYPLPKKQLLQLVESCDEILVLEDGQPFVEKHLKGYLGIGIKVKGRLDGTLSQDGEL NPDSVARAVGKENKSEFGVPSVVEMRPPALCEGCGHRDMYITLTEVLKEEYPSHKVFSDIGCYTLGANAPFNAINSCVDM GASITMAKGAADGGLHPSVAVIGDSTFTHSGMTGLLDCVNENANVVIVISDNETTAMTGGQDSAGTGRIESICIGLGVDP AHIRVVVPLKKNHEEMRQIIREEIEYNGVSVIIPRRECIQTLARKKRSK
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 58011; Mature: 57880
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00398 RECOMBINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQLLLGDEAIAQAALDAGLSGVYAYPGTPSTEITEYIQMAPITTEQNIHNRWCANEKT CCCCEECCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHH AMEAALGMSFVGKRALVCMKHVGMNVAADCFVNSAITGVKGGLIVIAADDPSMHSSQNEQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC DSRFYGDFSLIPMYEPSNQQEAYDMVYNGFEFSEKTGEPILMRMVTRLAHSRSGVERKEQ CCEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC KPQNSISFSEDPRQFILLPGNARKRYKVLLARQDEFIKASEESPYNKYIDGPNKKLGIVA CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHCCCCCCCCHHCCCCCCCEEEEEE CGIGYNYLMENYPEGCEYPVLKIGQYPLPKKQLLQLVESCDEILVLEDGQPFVEKHLKGY ECCCHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCHH LGIGIKVKGRLDGTLSQDGELNPDSVARAVGKENKSEFGVPSVVEMRPPALCEGCGHRDM EECCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCCCCE YITLTEVLKEEYPSHKVFSDIGCYTLGANAPFNAINSCVDMGASITMAKGAADGGLHPSV EEEHHHHHHHHCCCCHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCE AVIGDSTFTHSGMTGLLDCVNENANVVIVISDNETTAMTGGQDSAGTGRIESICIGLGVD EEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCC PAHIRVVVPLKKNHEEMRQIIREEIEYNGVSVIIPRRECIQTLARKKRSK CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC >Mature Secondary Structure SKQLLLGDEAIAQAALDAGLSGVYAYPGTPSTEITEYIQMAPITTEQNIHNRWCANEKT CCCEECCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCHH AMEAALGMSFVGKRALVCMKHVGMNVAADCFVNSAITGVKGGLIVIAADDPSMHSSQNEQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC DSRFYGDFSLIPMYEPSNQQEAYDMVYNGFEFSEKTGEPILMRMVTRLAHSRSGVERKEQ CCEEECCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHC KPQNSISFSEDPRQFILLPGNARKRYKVLLARQDEFIKASEESPYNKYIDGPNKKLGIVA CCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCHHCCCCCCCCHHCCCCCCCEEEEEE CGIGYNYLMENYPEGCEYPVLKIGQYPLPKKQLLQLVESCDEILVLEDGQPFVEKHLKGY ECCCHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHCHH LGIGIKVKGRLDGTLSQDGELNPDSVARAVGKENKSEFGVPSVVEMRPPALCEGCGHRDM EECCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHCCCCCCE YITLTEVLKEEYPSHKVFSDIGCYTLGANAPFNAINSCVDMGASITMAKGAADGGLHPSV EEEHHHHHHHHCCCCHHHHHCCCEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCE AVIGDSTFTHSGMTGLLDCVNENANVVIVISDNETTAMTGGQDSAGTGRIESICIGLGVD EEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCC PAHIRVVVPLKKNHEEMRQIIREEIEYNGVSVIIPRRECIQTLARKKRSK CCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]