| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is iorB [H]
Identifier: 29345839
GI number: 29345839
Start: 515869
End: 516453
Strand: Reverse
Name: iorB [H]
Synonym: BT_0429
Alternate gene names: 29345839
Gene position: 516453-515869 (Counterclockwise)
Preceding gene: 29345840
Following gene: 29345838
Centisome position: 8.25
GC content: 45.98
Gene sequence:
>585_bases ATGAAAAAAGACATTATATTATCAGGAGTAGGTGGACAGGGTATTTTGTCCATCGCTACAGTTATTGGTAAAGCTGCTTT GAAAGAAGGACTTTACATGAAGCAAGCAGAAGTACACGGAATGAGCCAGCGTGGCGGAGACGTTCAGTCCAACCTCCGCA TCAGCGACAAACCGATTGCTTCGGATCTGATACCATCCGGCAAATGCGACCTTATCATTTCGCTCGAACCGATGGAAGGT CTGCGCTATCTCCCCTATCTCAGTCCGGAAGGATGGCTGGTAACCAACGAAACTCCGTTTGTCAACATCCCCAATTATCC GGAAGAAGACAAAGTAATGGCTGAAATCAACAAATTGCCGCATAAGATCGTACTGAACGTGGATAAAGTAGCCAAAGAAG TAGGTTCTGCACGAGTTGCCAATATCGTTTTGCTGGGCGCAACCATTCCATTCCTCGGCATCGATTACGAGAAAGTACAA GACAGTATCCGCGAAATCTTCCTGCGCAAAGGAGAAGCTATTGTCGAAATGAATCTTAAAGCACTGGCTGCCGGCAAGGA AATTGCGGAAAAGCTAATGCAATAA
Upstream 100 bases:
>100_bases GATCATACGCGAAGAAATCGAATACAATGGCGTATCCGTTATCATCCCGCGCAGAGAGTGTATTCAAACATTAGCACGCA AAAAAAGAAGTAAGTAAGCC
Downstream 100 bases:
>100_bases CTATCACAATCATGAGTACACAATACTGGGAAGAAGAAATTGAAATCATGAGTCGCGAGAAGTTGCAGGAACTGCAACTT CAGCGACTCAAAAAAACGAT
Product: indolepyruvate oxidoreductase subunit beta
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDKPIASDLIPSGKCDLIISLEPMEG LRYLPYLSPEGWLVTNETPFVNIPNYPEEDKVMAEINKLPHKIVLNVDKVAKEVGSARVANIVLLGATIPFLGIDYEKVQ DSIREIFLRKGEAIVEMNLKALAAGKEIAEKLMQ
Sequences:
>Translated_194_residues MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDKPIASDLIPSGKCDLIISLEPMEG LRYLPYLSPEGWLVTNETPFVNIPNYPEEDKVMAEINKLPHKIVLNVDKVAKEVGSARVANIVLLGATIPFLGIDYEKVQ DSIREIFLRKGEAIVEMNLKALAAGKEIAEKLMQ >Mature_194_residues MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDKPIASDLIPSGKCDLIISLEPMEG LRYLPYLSPEGWLVTNETPFVNIPNYPEEDKVMAEINKLPHKIVLNVDKVAKEVGSARVANIVLLGATIPFLGIDYEKVQ DSIREIFLRKGEAIVEMNLKALAAGKEIAEKLMQ
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 21153; Mature: 21153
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDKPIA CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHCCCCCCCCCEECCCCCH SDLIPSGKCDLIISLEPMEGLRYLPYLSPEGWLVTNETPFVNIPNYPEEDKVMAEINKLP HHCCCCCCCEEEEEECCCCCCEECCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHCC HKIVLNVDKVAKEVGSARVANIVLLGATIPFLGIDYEKVQDSIREIFLRKGEAIVEMNLK HHEEEEHHHHHHHHCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHH ALAAGKEIAEKLMQ HHHCCHHHHHHHCC >Mature Secondary Structure MKKDIILSGVGGQGILSIATVIGKAALKEGLYMKQAEVHGMSQRGGDVQSNLRISDKPIA CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHCCCCCCCCCEECCCCCH SDLIPSGKCDLIISLEPMEGLRYLPYLSPEGWLVTNETPFVNIPNYPEEDKVMAEINKLP HHCCCCCCCEEEEEECCCCCCEECCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHCC HKIVLNVDKVAKEVGSARVANIVLLGATIPFLGIDYEKVQDSIREIFLRKGEAIVEMNLK HHEEEEHHHHHHHHCCHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECHH ALAAGKEIAEKLMQ HHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]