Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345811

Identifier: 29345811

GI number: 29345811

Start: 489864

End: 490082

Strand: Reverse

Name: 29345811

Synonym: BT_0401

Alternate gene names: NA

Gene position: 490082-489864 (Counterclockwise)

Preceding gene: 29345813

Following gene: 29345782

Centisome position: 7.83

GC content: 32.42

Gene sequence:

>219_bases
ATGGTTGACATCTACGCATCCAGCGACGAAGTTTATTTACTGAAGCGCGAACAGTTATATCAGGGAAATACATTTGGGCT
AAGTCTTGTTTATTGTAGCATTTCACTACAAAATCAGGTTGATTCATTGTATCTTTATGCTTGGTTTATAAGCAATAAAG
ATACAAAATTATTCACCCATTTCCTACGCTTTTTTCATATTTTATTTCAAATTTACTAG

Upstream 100 bases:

>100_bases
TCTCCCGGCTTACCCAAATAGTAGGTGATTAACCTTACTTCCCGCACAGAAAAAGCTTTCGTTTTCGGATGAAAATCCGT
AGAAAGTATCTCATCCATTA

Downstream 100 bases:

>100_bases
TCTTTTCTTTCACTTTTGGTCTGACCATATCCATAGCCGTAACCATAACGTTTACCATATCCATAATGCTTGCCATACTT
ACCGTAGCCGTAGTAATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MVDIYASSDEVYLLKREQLYQGNTFGLSLVYCSISLQNQVDSLYLYAWFISNKDTKLFTHFLRFFHILFQIY

Sequences:

>Translated_72_residues
MVDIYASSDEVYLLKREQLYQGNTFGLSLVYCSISLQNQVDSLYLYAWFISNKDTKLFTHFLRFFHILFQIY
>Mature_72_residues
MVDIYASSDEVYLLKREQLYQGNTFGLSLVYCSISLQNQVDSLYLYAWFISNKDTKLFTHFLRFFHILFQIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8660; Mature: 8660

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIYASSDEVYLLKREQLYQGNTFGLSLVYCSISLQNQVDSLYLYAWFISNKDTKLFTH
CEEEEECCCCEEEEEECHHCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCHHHHHH
FLRFFHILFQIY
HHHHHHHHHHCC
>Mature Secondary Structure
MVDIYASSDEVYLLKREQLYQGNTFGLSLVYCSISLQNQVDSLYLYAWFISNKDTKLFTH
CEEEEECCCCEEEEEECHHCCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCHHHHHH
FLRFFHILFQIY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA