Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is vorB [H]

Identifier: 29345741

GI number: 29345741

Start: 396996

End: 397883

Strand: Reverse

Name: vorB [H]

Synonym: BT_0331

Alternate gene names: 29345741

Gene position: 397883-396996 (Counterclockwise)

Preceding gene: 29345742

Following gene: 29345740

Centisome position: 6.36

GC content: 48.31

Gene sequence:

>888_bases
ATGGTATATGGAGGCGCAGGTAGTGGAAAGATGGTATTGACCTCTTCCTCAAGTCCCGGCGTGAGTCTGAAACAGGAAGG
TATCTCCTACATCGCAGGTGCCGAACTTCCTTGTCTGATTGTAAACGTAATGCGCGGCGGTCCCGGATTGGGAACCATCC
AGCCGAGTCAGGCGGACTACTTCCAGACAGTGAAAGGAGGCGGTCACGGTGACTACAGACTGATTGCCCTTGCTCCGGCA
TCCGTACAGGAAATGGCGGATTTCGTTGCACTCGGATTCGAACTTGCTTTCAAATACCGTAATCCGGCTATTATCCTTGC
CGACGGTGTAATCGGACAGATGATGGAAAAAGTAGTTCTTCCTGCACAGAAGCCACGCCGCACCGATGCAGAAGTTATCG
AACAATGTCCGTGGGCTGCTACCGGAAAAGCGAAAGGTCGTAAACCGAATATTATTACTTCACTCGAACTGAAGCCGGAA
GCAATGGAAATCAACAACATCCGTTTCCAGGCTAAATACAAACAGATTGAGGAAAACGAAGTACGCTTCGAAGAAATCAA
CTGCGAAGATGCAGAATATCTGATCGTAGCTTTCGGTTCCATGGCACGTATCGGTCAGAAAGCAATGGAACTCGCCCGCG
AAAAAGGAATCAAAGTAGGTATTCTTCGCCCCATCACTTTGTGGCCGTTCCCGAGCAAAGCCATTGCCGCTTACGCTGAC
AAAGTGAAAGGTATGCTCGTTACAGAATTGAATGCCGGACAGATGATCGAAGATGTCCGCCTGGCTGTCAATGGTAAAGT
AAAAGTAGAACATTTCGGACGTCTCGGCGGTATTGTTCCCGATCCGGATGAAATTGTAACTGCTCTGGAAGAAAAAATAA
TCAAATAA

Upstream 100 bases:

>100_bases
CCCCAATCGGAAGTACTGGAAACGCTTGCCGAACTGAAACCGTGGGAAACAACCGGCATGGTAGTTCTTCCAGGCAGAAA
GTGAAGTGGCAGCTATCAAT

Downstream 100 bases:

>100_bases
CGAAACGACGATGAATCCCGATAAAATAAGAAACGTATTGAACATCCTTTTCATGATATTGGCACTTGCCGCTATCATTG
TCTACTTTGTAGTAGGAAAG

Product: 2-oxoglutarate ferredoxin oxidoreductase

Products: NA

Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA
SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE
AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD
KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK

Sequences:

>Translated_295_residues
MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA
SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE
AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD
KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK
>Mature_295_residues
MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADYFQTVKGGGHGDYRLIALAPA
SVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVLPAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPE
AMEINNIRFQAKYKQIEENEVRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD
KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.7 [H]

Molecular weight: Translated: 31977; Mature: 31977

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADY
CEECCCCCCCEEEECCCCCCCEEHHHCCCEECCCCCCEEEHHHHCCCCCCCCCCCCCCHH
FQTVKGGGHGDYRLIALAPASVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVL
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHC
PAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPEAMEINNIRFQAKYKQIEENE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEHHHHCCCCC
VRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD
CEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHH
KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK
HHCCEEEEECCCCHHHHHHHEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVYGGAGSGKMVLTSSSSPGVSLKQEGISYIAGAELPCLIVNVMRGGPGLGTIQPSQADY
CEECCCCCCCEEEECCCCCCCEEHHHCCCEECCCCCCEEEHHHHCCCCCCCCCCCCCCHH
FQTVKGGGHGDYRLIALAPASVQEMADFVALGFELAFKYRNPAIILADGVIGQMMEKVVL
HHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEEECCCEEEEECCHHHHHHHHHHC
PAQKPRRTDAEVIEQCPWAATGKAKGRKPNIITSLELKPEAMEINNIRFQAKYKQIEENE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEHHHHCCCCC
VRFEEINCEDAEYLIVAFGSMARIGQKAMELAREKGIKVGILRPITLWPFPSKAIAAYAD
CEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHH
KVKGMLVTELNAGQMIEDVRLAVNGKVKVEHFGRLGGIVPDPDEIVTALEEKIIK
HHCCEEEEECCCCHHHHHHHEEECCEEEEEEHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]