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The map label for this gene is ylbK [H]

Identifier: 29345713

GI number: 29345713

Start: 360384

End: 362600

Strand: Reverse

Name: ylbK [H]

Synonym: BT_0303

Alternate gene names: 29345713

Gene position: 362600-360384 (Counterclockwise)

Preceding gene: 29345724

Following gene: 29345699

Centisome position: 5.79

GC content: 44.93

Gene sequence:

>2217_bases
ATGAAAAAACAAATCTTTTCAACATTAGTTTTTGCAATGTGCCTGATATTACCTTTTTCTGTTTATTCACAGGAACAACG
GAAGAAGGTCGGCGTTGTCCTCAGTGGCGGCGGTGCCAAAGGAGTGGCACATATCAAAGCATTGAAAGTCATCGAGGAAG
CAGGCATTCCGATCGATTATATAGTAGGCACCAGTATGGGATCTATAGTCGGTGGACTTTACGCCATCGGTTATACTCCG
GAACAACTGGACAGTATGGTACGCAAACAGGACTGGACTTTCCTTTTGAGCGATCGTATCAAACGCAGTGCCATGTCGCT
CACCGAACGCGAACGCTCTGCAAAATACATTGTTTCGCTTCCTTTCACAAAGAACCCGAAAGCTGCCATGTCCGGAGGAA
TTATCAAAGGACAGAATCTTGCCAATCTGTTCTCTGATCTGACAGTGGGCTACCATGACTCGATCAATTTTAATAAGTTA
CCGATCCCCTTCGCCTGTGTATCGGCCAATGTAGTCAATGGGGACCAGATCGTATTCCATGATGGCGTACTCTCTACTGC
CATGCGTGCCAGTATGGCTATCCCCGGTGTATTCACACCGGTACGCAAAGACAGTATGGTATTGGTAGACGGTGGAATTG
TCAATAATTATCCGGCAGATGTGGCCAAAGCAATGGGGGCCGATATTATTATCGGAGTCGATGTTCAGAATGCGCTGAAA
AGTGCCGACAAGCTCAACAGCGCTCCGGACATATTGGGGCAGATTGTTGATCTCACTTGCCAGACCAATCATGAAAAGAA
TGTAGAACTCACTGATACCTATATCAAGGTAAATGTAGACGGATTTTCTTCCGCCAGCTTCACTCCGGCAGCCATCGATT
CCCTGATGCGTCGGGGCGAAGAAGCCGCACGTGCACAGTGGAATTCCCTGATTGCCTTAAAAAAAGAAATCGGTATACCG
GACAATTATGTCCCCAAACAACATGGACCGTACTCTTCTCTTTCCAATTCACGGACAGTATACGTCACAGATATATCCTT
CTCCGGCGTAGAGGCTGATGACAAAAAATGGCTGATGAAGAAGTGTAATCTCAAAGAGAACAGTAACATTACCACTCAGC
AGATAGAACAAGCTGTGTATCAGTTGCGTGGCAGTCATTCTTACTCAAGCGCCAGCTACACACTTACCGACACTCCCGAA
GGGTATCACCTTAATTTCTTGTTAGAAGAAAAATATGAGAAAAGAATCAATCTGGGCATCCGTTTCGACTCGGAAGAAAT
AGCATCCCTGCTGATTAATGCCACAGCAGATCTCAAAACTCATATTCCTTCCCGATTATCCCTGACCGGCCGATTAGGAA
AGCGATATGCCGCCCGCATCGATTACACACTCGAACCGATGCAGCAACGCAATTTCAATTTCTCATATATGTTTCAATAT
AATGACATCAACATCTATGATGAAGGTGAACGTGCTTACAACACTACTTACAAGTATCATTTAGCTGAATTTGGTTTTTC
GGATGTCTGGTACAAAAACCTCCGCTTCGGACTCGGACTTCGTTTCGAATATTATAAATACAAAGATTTTCTTTTCAAGA
AACCGGAACTCACTGGGCTGGATGTAGAATCCGAACACTTCCTGAGTTATTTCGCTCAGGTACACTATAGTACATTCGAC
AAGGGATATTTCCCTTCCAAAGGAACCGAATTCAAAGCTGCCTATTCGCTTTATACCGATAATATGGCGCAGTATAATGA
TCATGCCCCATTCTCTGCGTTGAGCGGCTCGTGGTCCAGTGTCATACCTGTTACCCGACGTTTTTCCATTATCCCATCCA
TCTATGGCCGTGTTCTGATTGGAAAAGACATCGCCTATCCCTTGCAAAATGCCATTGGCGGCGAAGTATACGGACTCTAC
ATTCCACAGCAACTGCCGTTTGCCGGTGTGACCAATATGGAACTGATGGACAATTCAATCATGATTGCATCCGTGAAGCT
CAGACAACGGATGGGAAGCATTCATTATCTCACTCTGACAGGTAATTATGGCTTGACGGACAGTCACTTCTTCGAAATAC
TGAAAGGGAAACAACTGTTTGGTATCAGTGCCGGATATGGTATGGACAGTATGTTCGGTCCGTTGGAGATTACGTTCGGG
TATTCCAATCAGACTGACAAAGGAAGTTGTTATGTGAATCTGGGATACTACTTCTAA

Upstream 100 bases:

>100_bases
CCGACTTTTAGAACATTTTTTATAGTTCTTGTTTCATCAACTAAACAATTTATCCCCTACATTTGTAGTTATATTGTACA
TCAACACAATAACATGTCTA

Downstream 100 bases:

>100_bases
GTCACTATTTCGGTTCCTGCATACATAGGACTATACTTACCATGATGAGAAAAAGTTCTCACTGCGATGAGACTTTTTTC
TCATCATAGTGAGAATTTTT

Product: putative patatin-like phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 738; Mature: 738

Protein sequence:

>738_residues
MKKQIFSTLVFAMCLILPFSVYSQEQRKKVGVVLSGGGAKGVAHIKALKVIEEAGIPIDYIVGTSMGSIVGGLYAIGYTP
EQLDSMVRKQDWTFLLSDRIKRSAMSLTERERSAKYIVSLPFTKNPKAAMSGGIIKGQNLANLFSDLTVGYHDSINFNKL
PIPFACVSANVVNGDQIVFHDGVLSTAMRASMAIPGVFTPVRKDSMVLVDGGIVNNYPADVAKAMGADIIIGVDVQNALK
SADKLNSAPDILGQIVDLTCQTNHEKNVELTDTYIKVNVDGFSSASFTPAAIDSLMRRGEEAARAQWNSLIALKKEIGIP
DNYVPKQHGPYSSLSNSRTVYVTDISFSGVEADDKKWLMKKCNLKENSNITTQQIEQAVYQLRGSHSYSSASYTLTDTPE
GYHLNFLLEEKYEKRINLGIRFDSEEIASLLINATADLKTHIPSRLSLTGRLGKRYAARIDYTLEPMQQRNFNFSYMFQY
NDINIYDEGERAYNTTYKYHLAEFGFSDVWYKNLRFGLGLRFEYYKYKDFLFKKPELTGLDVESEHFLSYFAQVHYSTFD
KGYFPSKGTEFKAAYSLYTDNMAQYNDHAPFSALSGSWSSVIPVTRRFSIIPSIYGRVLIGKDIAYPLQNAIGGEVYGLY
IPQQLPFAGVTNMELMDNSIMIASVKLRQRMGSIHYLTLTGNYGLTDSHFFEILKGKQLFGISAGYGMDSMFGPLEITFG
YSNQTDKGSCYVNLGYYF

Sequences:

>Translated_738_residues
MKKQIFSTLVFAMCLILPFSVYSQEQRKKVGVVLSGGGAKGVAHIKALKVIEEAGIPIDYIVGTSMGSIVGGLYAIGYTP
EQLDSMVRKQDWTFLLSDRIKRSAMSLTERERSAKYIVSLPFTKNPKAAMSGGIIKGQNLANLFSDLTVGYHDSINFNKL
PIPFACVSANVVNGDQIVFHDGVLSTAMRASMAIPGVFTPVRKDSMVLVDGGIVNNYPADVAKAMGADIIIGVDVQNALK
SADKLNSAPDILGQIVDLTCQTNHEKNVELTDTYIKVNVDGFSSASFTPAAIDSLMRRGEEAARAQWNSLIALKKEIGIP
DNYVPKQHGPYSSLSNSRTVYVTDISFSGVEADDKKWLMKKCNLKENSNITTQQIEQAVYQLRGSHSYSSASYTLTDTPE
GYHLNFLLEEKYEKRINLGIRFDSEEIASLLINATADLKTHIPSRLSLTGRLGKRYAARIDYTLEPMQQRNFNFSYMFQY
NDINIYDEGERAYNTTYKYHLAEFGFSDVWYKNLRFGLGLRFEYYKYKDFLFKKPELTGLDVESEHFLSYFAQVHYSTFD
KGYFPSKGTEFKAAYSLYTDNMAQYNDHAPFSALSGSWSSVIPVTRRFSIIPSIYGRVLIGKDIAYPLQNAIGGEVYGLY
IPQQLPFAGVTNMELMDNSIMIASVKLRQRMGSIHYLTLTGNYGLTDSHFFEILKGKQLFGISAGYGMDSMFGPLEITFG
YSNQTDKGSCYVNLGYYF
>Mature_738_residues
MKKQIFSTLVFAMCLILPFSVYSQEQRKKVGVVLSGGGAKGVAHIKALKVIEEAGIPIDYIVGTSMGSIVGGLYAIGYTP
EQLDSMVRKQDWTFLLSDRIKRSAMSLTERERSAKYIVSLPFTKNPKAAMSGGIIKGQNLANLFSDLTVGYHDSINFNKL
PIPFACVSANVVNGDQIVFHDGVLSTAMRASMAIPGVFTPVRKDSMVLVDGGIVNNYPADVAKAMGADIIIGVDVQNALK
SADKLNSAPDILGQIVDLTCQTNHEKNVELTDTYIKVNVDGFSSASFTPAAIDSLMRRGEEAARAQWNSLIALKKEIGIP
DNYVPKQHGPYSSLSNSRTVYVTDISFSGVEADDKKWLMKKCNLKENSNITTQQIEQAVYQLRGSHSYSSASYTLTDTPE
GYHLNFLLEEKYEKRINLGIRFDSEEIASLLINATADLKTHIPSRLSLTGRLGKRYAARIDYTLEPMQQRNFNFSYMFQY
NDINIYDEGERAYNTTYKYHLAEFGFSDVWYKNLRFGLGLRFEYYKYKDFLFKKPELTGLDVESEHFLSYFAQVHYSTFD
KGYFPSKGTEFKAAYSLYTDNMAQYNDHAPFSALSGSWSSVIPVTRRFSIIPSIYGRVLIGKDIAYPLQNAIGGEVYGLY
IPQQLPFAGVTNMELMDNSIMIASVKLRQRMGSIHYLTLTGNYGLTDSHFFEILKGKQLFGISAGYGMDSMFGPLEITFG
YSNQTDKGSCYVNLGYYF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=208, Percent_Identity=33.1730769230769, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI260656041, Length=208, Percent_Identity=33.1730769230769, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI116256487, Length=208, Percent_Identity=33.1730769230769, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI260656037, Length=208, Percent_Identity=33.1730769230769, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI260656043, Length=208, Percent_Identity=33.1730769230769, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI148727335, Length=208, Percent_Identity=32.2115384615385, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI148727290, Length=208, Percent_Identity=32.2115384615385, Blast_Score=105, Evalue=2e-22,
Organism=Escherichia coli, GI226510936, Length=214, Percent_Identity=29.4392523364486, Blast_Score=103, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71997299, Length=190, Percent_Identity=33.1578947368421, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71997289, Length=190, Percent_Identity=33.1578947368421, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193204778, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=224, Percent_Identity=30.8035714285714, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI28571388, Length=287, Percent_Identity=26.8292682926829, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281376913, Length=287, Percent_Identity=27.1777003484321, Blast_Score=89, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 82464; Mature: 82464

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQIFSTLVFAMCLILPFSVYSQEQRKKVGVVLSGGGAKGVAHIKALKVIEEAGIPIDY
CCHHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
IVGTSMGSIVGGLYAIGYTPEQLDSMVRKQDWTFLLSDRIKRSAMSLTERERSAKYIVSL
EECCCHHHHHHHHHEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEC
PFTKNPKAAMSGGIIKGQNLANLFSDLTVGYHDSINFNKLPIPFACVSANVVNGDQIVFH
CCCCCCCHHHCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECEEECCCEEEEE
DGVLSTAMRASMAIPGVFTPVRKDSMVLVDGGIVNNYPADVAKAMGADIIIGVDVQNALK
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECHHHHHH
SADKLNSAPDILGQIVDLTCQTNHEKNVELTDTYIKVNVDGFSSASFTPAAIDSLMRRGE
HHHHCCCCHHHHHHHHHEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCH
EAARAQWNSLIALKKEIGIPDNYVPKQHGPYSSLSNSRTVYVTDISFSGVEADDKKWLMK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHH
KCNLKENSNITTQQIEQAVYQLRGSHSYSSASYTLTDTPEGYHLNFLLEEKYEKRINLGI
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHHEEEEE
RFDSEEIASLLINATADLKTHIPSRLSLTGRLGKRYAARIDYTLEPMQQRNFNFSYMFQY
EECHHHHHHHHHHCCCHHHHCCCCCEEEHHHHCCCEEEEECCEECHHHHCCCCEEEEEEE
NDINIYDEGERAYNTTYKYHLAEFGFSDVWYKNLRFGLGLRFEYYKYKDFLFKKPELTGL
CCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCC
DVESEHFLSYFAQVHYSTFDKGYFPSKGTEFKAAYSLYTDNMAQYNDHAPFSALSGSWSS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHCCCCCH
VIPVTRRFSIIPSIYGRVLIGKDIAYPLQNAIGGEVYGLYIPQQLPFAGVTNMELMDNSI
HCHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCE
MIASVKLRQRMGSIHYLTLTGNYGLTDSHFFEILKGKQLFGISAGYGMDSMFGPLEITFG
EEEEEHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEC
YSNQTDKGSCYVNLGYYF
CCCCCCCCCEEEEECEEC
>Mature Secondary Structure
MKKQIFSTLVFAMCLILPFSVYSQEQRKKVGVVLSGGGAKGVAHIKALKVIEEAGIPIDY
CCHHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
IVGTSMGSIVGGLYAIGYTPEQLDSMVRKQDWTFLLSDRIKRSAMSLTERERSAKYIVSL
EECCCHHHHHHHHHEECCCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCEEEEEC
PFTKNPKAAMSGGIIKGQNLANLFSDLTVGYHDSINFNKLPIPFACVSANVVNGDQIVFH
CCCCCCCHHHCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECEEECCCEEEEE
DGVLSTAMRASMAIPGVFTPVRKDSMVLVDGGIVNNYPADVAKAMGADIIIGVDVQNALK
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCEEEEECHHHHHH
SADKLNSAPDILGQIVDLTCQTNHEKNVELTDTYIKVNVDGFSSASFTPAAIDSLMRRGE
HHHHCCCCHHHHHHHHHEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCH
EAARAQWNSLIALKKEIGIPDNYVPKQHGPYSSLSNSRTVYVTDISFSGVEADDKKWLMK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHH
KCNLKENSNITTQQIEQAVYQLRGSHSYSSASYTLTDTPEGYHLNFLLEEKYEKRINLGI
HCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHHEEEEE
RFDSEEIASLLINATADLKTHIPSRLSLTGRLGKRYAARIDYTLEPMQQRNFNFSYMFQY
EECHHHHHHHHHHCCCHHHHCCCCCEEEHHHHCCCEEEEECCEECHHHHCCCCEEEEEEE
NDINIYDEGERAYNTTYKYHLAEFGFSDVWYKNLRFGLGLRFEYYKYKDFLFKKPELTGL
CCEEEEECCCCCCCCEEEEEEHHCCCCHHHHHHHHHCCCEEEEEEEHHHHHCCCCCCCCC
DVESEHFLSYFAQVHYSTFDKGYFPSKGTEFKAAYSLYTDNMAQYNDHAPFSALSGSWSS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHCCCCCCCHHHCCCCCH
VIPVTRRFSIIPSIYGRVLIGKDIAYPLQNAIGGEVYGLYIPQQLPFAGVTNMELMDNSI
HCHHHHHHHHHHHHHCEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCE
MIASVKLRQRMGSIHYLTLTGNYGLTDSHFFEILKGKQLFGISAGYGMDSMFGPLEITFG
EEEEEHHHHHHCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEC
YSNQTDKGSCYVNLGYYF
CCCCCCCCCEEEEECEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]