Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345667

Identifier: 29345667

GI number: 29345667

Start: 285198

End: 288110

Strand: Reverse

Name: 29345667

Synonym: BT_0257

Alternate gene names: NA

Gene position: 288110-285198 (Counterclockwise)

Preceding gene: 29345668

Following gene: 29345666

Centisome position: 4.6

GC content: 45.66

Gene sequence:

>2913_bases
ATGAAAAAAATAATAGTCTTTCTTCTGTGCCTGACAATGGGCACCAGTCTTCTCTTCGCTCAGGACATTGAGAGAAATAT
AAAAGAGCGGTTAACGGATTACTTTGCCAAATACACAGCGACAGCTAAAATCAGTACACCGAAACTGAACAGTTTCGATA
TTGATTATGACCGCAGAACCATTCAGATTTATGCTTCGGAAAGCTTCGCCTACCAGCCCTTTCTGCCGGAAACGGTAGAA
ACCATCTACAATCAGATGAAAGAACTGCTCCCCGGTCCGGTAAACTATTATCAGATCACCATTTATGCAGATGGAAAGCC
CATTGAAGAATTAGTTCCCAACTTGTACAGAAGCAAGAAAAAGGATAAAGAACGAATGGCGCTGAACACCGAATACAAAG
GTGCTCCATGGGTGAAAAACACTTCCCGCCCCAATGAGATATCCCGAGGATTGCAGGACCGGCATATTGCCCTCTGGCAA
AGTCACGGTAATTATTATAAGAATGACAAAGGCGAATGGGGATGGCAGCGCCCCCGATTATTCTGCACCACAGAAGATAT
GTTCACTCAATCCTTCATTCTTCCATACGTCATTCCGATGTTGGAAAATGCCGGTGCCATTGTGTATACTCCTCGCGAAC
GGGACACACAAAAGAATGAAATCATTGTTGACAACGATACTCCGAATGCTTCCCTTTATTTGGAAGTAGGCAGTAAGAAA
GCACGCTGGACGACTACTTCCGTGAAAGGATTCGCCCAGAAAAAAGCCATTTACAAAGATGGGGAAAACCCTTTCACTGA
CGGTACCAGCCGGTATATTCAAACAGAAAAGAAAAAAAAGAAGAATAAGGATCAGGCTTTTGCCGAATGGGTACCTACCC
TGCCGGCAACCGGAAAATATGCGGTCTATGTTTCATATCAGACACTACCCAATAGCGTGAGCGATGCCAAATACCTCGTC
TTTCATAATGGGGGTGTCACGGAATTTAAGGTCAATCAAAAAATAGGCGGCGGTACTTGGGTATATCTCGGAACTTTTGA
GTTTGACAAAGGAAATAATGACTACGGCATGGTTGTACTGAGTAATGAAAGTAGCGAGCATGGCGTAGTGTGTGCAGATG
CCGTACGCTTCGGAGGAGGAATGGGTAATATCTCACGCGGAGGAAAAATAAGCGGACTCCCCCGTTATCTGGAAGGAGCA
CGATATTCATCCCAGTGGGCCGGTATGCCATACGATGTATATGCCGGGCGTAAAGGAGAAAACGATTATACAGACGATAT
CAATACACGTTCCAATACAATCAACTATCTGTCGGGAGGCTCTGTCTATAATCCGGGACAAACGGGTTTAGGTGTACCTC
TGGAAATGACTATGGCACTTCATAGTGACGCTGGATGCAGTAAAGACGATGAAATCATCGGTTCGCTCGGCATCTATACC
ACCGATTTCAATAATGGCAAACTAAATTCGGGAATGGACAGATATGCTTCACGTGATCTTGCGGATATCCTGCTGACTCA
AATTCAGAAAGATATTCGTACGAACTACAATCTACCATGGACACGCCGCAGTATGTGGAACCGGAATTACAGTGAAACAC
GACTTCCTGCTACTCCTTCCACGATTATCGAATTGCTCTCTCATCAGAACTTTGCAGATATGCAGCTTGGTCATAATCCG
AATTTCAAGTTTACCGTAGGACGTGCTATCTACAAAGGTATCCTGCAATTTATAAACAGTCAGCATGGCAAAGACTATGT
AGTGCAACCTCTTCCGGTCAGCAACTTCGCTATCCATTTCGGAAAAAAGAAAAACACACTGGAACTTACCTGGAAAGGGG
AAGACGATCCGCTGGAACCGACAGCCCGTCCACGGGAATATATGGTATATACACGCATCGGATACGGAGGATTCGACAAC
GGAACTCTGGTCAGCAAACCCTATTACAGTGTCAAAGTAGAACCGGGACTTGTCTATTCGTTCAAAGTGACAGCCGTAAA
CCGGGGAGGAGAAAGTTTTCCTTCTGAAATCCTTTCGGCTTATAAGGCAAAACGTGAACGAGAGAGAATCTTGATTATCA
ATGGATTCGACAGAATCAGCGGTCCGGCTGTCATTAACACACCGGACAAAGCCGGATTTGATCTGGAACAGGATCCGGGA
GTGCCTTATTTATCCAATATCTCTTTTTGCGGGGCACAAAGCGGATTCAACCGTTCACAAGCTGGAAAAGAAGGAGAAGG
CAGCCTGGGACATAGCGGCAGAGAGCTGGAAGGCATGGAGATAGCAGGAAATACGTTTGATTATCCTTTCATTCATGGGA
AAGCCATTCAGGCAGCAGGGAAATACAGCTTTGTCTCGTGCAGCGACGAAGCGGTAGAGAATGGAATCGTCACTTTAGAA
GATTACCCGATCGTAGACTATATACTCGGACTTGAAAAGGAAGACCCGATAGCCAAAGCATATTACAAAACATTCTCTTC
ACCGATGCAAAGACTGATTACAAGCTATTGCCAGTCAGGAGGTCATTTGTTCGTCAGCGGTGCGTATGTGGGAAGTGACA
TGAGCGGAACACAAGGGAACCGGGAGTTTACAGAGAAAGTTTTGAAATACGGTTATCAGAACAGTCTGACAGACAAAAGT
TCCGGTCAAATCAATGGATTAGGACGCAGCATCACGATCCCCCGCCTGCCCAATGAGACCAGTTATGCTGTTACGGCACC
GGACTGCATCGTTCCGGTAGCTCCCGCATTTCCAGTATTTACTTATGCACGTGGCAATCAGTCGGCAGGCATTGCTTACA
AAGGAGCAGACTATCGCACCTTCGTACTCGGCTTTCCTTTCGAAAGCATTCAGTCGGAAACAGATCGCGCCAGCATTATG
GCCGGGATACTAGGTTTCTTTACTCAGAAATAA

Upstream 100 bases:

>100_bases
GCGAGATTCATTTCGTATTCTCCTTCCAAAAGGGGAAATGCCATCAAGGGGAAAGTGGCGGACATAGATAATCATAGGAT
GCAACCTAAAGAGTGGAACG

Downstream 100 bases:

>100_bases
AGTACTCACGGATATAAGATTTATTTTCTGAAAGCCCGGATAAAAATATCCGGGCTTTTTTAATTCGTTTTTCATTTTAA
ATTCTATCTTTGCTCCTAGT

Product: xanthan lyase

Products: NA

Alternate protein names: Xanthan Lyase; N-Acetylmuramoyl-L-Alanine Amidase; Exported Xanthan Lyase/N-Acetylmuramoyl-L-Alanine Amidase; Fibronectin Type IIIi Domain Protein

Number of amino acids: Translated: 970; Mature: 970

Protein sequence:

>970_residues
MKKIIVFLLCLTMGTSLLFAQDIERNIKERLTDYFAKYTATAKISTPKLNSFDIDYDRRTIQIYASESFAYQPFLPETVE
TIYNQMKELLPGPVNYYQITIYADGKPIEELVPNLYRSKKKDKERMALNTEYKGAPWVKNTSRPNEISRGLQDRHIALWQ
SHGNYYKNDKGEWGWQRPRLFCTTEDMFTQSFILPYVIPMLENAGAIVYTPRERDTQKNEIIVDNDTPNASLYLEVGSKK
ARWTTTSVKGFAQKKAIYKDGENPFTDGTSRYIQTEKKKKKNKDQAFAEWVPTLPATGKYAVYVSYQTLPNSVSDAKYLV
FHNGGVTEFKVNQKIGGGTWVYLGTFEFDKGNNDYGMVVLSNESSEHGVVCADAVRFGGGMGNISRGGKISGLPRYLEGA
RYSSQWAGMPYDVYAGRKGENDYTDDINTRSNTINYLSGGSVYNPGQTGLGVPLEMTMALHSDAGCSKDDEIIGSLGIYT
TDFNNGKLNSGMDRYASRDLADILLTQIQKDIRTNYNLPWTRRSMWNRNYSETRLPATPSTIIELLSHQNFADMQLGHNP
NFKFTVGRAIYKGILQFINSQHGKDYVVQPLPVSNFAIHFGKKKNTLELTWKGEDDPLEPTARPREYMVYTRIGYGGFDN
GTLVSKPYYSVKVEPGLVYSFKVTAVNRGGESFPSEILSAYKAKRERERILIINGFDRISGPAVINTPDKAGFDLEQDPG
VPYLSNISFCGAQSGFNRSQAGKEGEGSLGHSGRELEGMEIAGNTFDYPFIHGKAIQAAGKYSFVSCSDEAVENGIVTLE
DYPIVDYILGLEKEDPIAKAYYKTFSSPMQRLITSYCQSGGHLFVSGAYVGSDMSGTQGNREFTEKVLKYGYQNSLTDKS
SGQINGLGRSITIPRLPNETSYAVTAPDCIVPVAPAFPVFTYARGNQSAGIAYKGADYRTFVLGFPFESIQSETDRASIM
AGILGFFTQK

Sequences:

>Translated_970_residues
MKKIIVFLLCLTMGTSLLFAQDIERNIKERLTDYFAKYTATAKISTPKLNSFDIDYDRRTIQIYASESFAYQPFLPETVE
TIYNQMKELLPGPVNYYQITIYADGKPIEELVPNLYRSKKKDKERMALNTEYKGAPWVKNTSRPNEISRGLQDRHIALWQ
SHGNYYKNDKGEWGWQRPRLFCTTEDMFTQSFILPYVIPMLENAGAIVYTPRERDTQKNEIIVDNDTPNASLYLEVGSKK
ARWTTTSVKGFAQKKAIYKDGENPFTDGTSRYIQTEKKKKKNKDQAFAEWVPTLPATGKYAVYVSYQTLPNSVSDAKYLV
FHNGGVTEFKVNQKIGGGTWVYLGTFEFDKGNNDYGMVVLSNESSEHGVVCADAVRFGGGMGNISRGGKISGLPRYLEGA
RYSSQWAGMPYDVYAGRKGENDYTDDINTRSNTINYLSGGSVYNPGQTGLGVPLEMTMALHSDAGCSKDDEIIGSLGIYT
TDFNNGKLNSGMDRYASRDLADILLTQIQKDIRTNYNLPWTRRSMWNRNYSETRLPATPSTIIELLSHQNFADMQLGHNP
NFKFTVGRAIYKGILQFINSQHGKDYVVQPLPVSNFAIHFGKKKNTLELTWKGEDDPLEPTARPREYMVYTRIGYGGFDN
GTLVSKPYYSVKVEPGLVYSFKVTAVNRGGESFPSEILSAYKAKRERERILIINGFDRISGPAVINTPDKAGFDLEQDPG
VPYLSNISFCGAQSGFNRSQAGKEGEGSLGHSGRELEGMEIAGNTFDYPFIHGKAIQAAGKYSFVSCSDEAVENGIVTLE
DYPIVDYILGLEKEDPIAKAYYKTFSSPMQRLITSYCQSGGHLFVSGAYVGSDMSGTQGNREFTEKVLKYGYQNSLTDKS
SGQINGLGRSITIPRLPNETSYAVTAPDCIVPVAPAFPVFTYARGNQSAGIAYKGADYRTFVLGFPFESIQSETDRASIM
AGILGFFTQK
>Mature_970_residues
MKKIIVFLLCLTMGTSLLFAQDIERNIKERLTDYFAKYTATAKISTPKLNSFDIDYDRRTIQIYASESFAYQPFLPETVE
TIYNQMKELLPGPVNYYQITIYADGKPIEELVPNLYRSKKKDKERMALNTEYKGAPWVKNTSRPNEISRGLQDRHIALWQ
SHGNYYKNDKGEWGWQRPRLFCTTEDMFTQSFILPYVIPMLENAGAIVYTPRERDTQKNEIIVDNDTPNASLYLEVGSKK
ARWTTTSVKGFAQKKAIYKDGENPFTDGTSRYIQTEKKKKKNKDQAFAEWVPTLPATGKYAVYVSYQTLPNSVSDAKYLV
FHNGGVTEFKVNQKIGGGTWVYLGTFEFDKGNNDYGMVVLSNESSEHGVVCADAVRFGGGMGNISRGGKISGLPRYLEGA
RYSSQWAGMPYDVYAGRKGENDYTDDINTRSNTINYLSGGSVYNPGQTGLGVPLEMTMALHSDAGCSKDDEIIGSLGIYT
TDFNNGKLNSGMDRYASRDLADILLTQIQKDIRTNYNLPWTRRSMWNRNYSETRLPATPSTIIELLSHQNFADMQLGHNP
NFKFTVGRAIYKGILQFINSQHGKDYVVQPLPVSNFAIHFGKKKNTLELTWKGEDDPLEPTARPREYMVYTRIGYGGFDN
GTLVSKPYYSVKVEPGLVYSFKVTAVNRGGESFPSEILSAYKAKRERERILIINGFDRISGPAVINTPDKAGFDLEQDPG
VPYLSNISFCGAQSGFNRSQAGKEGEGSLGHSGRELEGMEIAGNTFDYPFIHGKAIQAAGKYSFVSCSDEAVENGIVTLE
DYPIVDYILGLEKEDPIAKAYYKTFSSPMQRLITSYCQSGGHLFVSGAYVGSDMSGTQGNREFTEKVLKYGYQNSLTDKS
SGQINGLGRSITIPRLPNETSYAVTAPDCIVPVAPAFPVFTYARGNQSAGIAYKGADYRTFVLGFPFESIQSETDRASIM
AGILGFFTQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 108391; Mature: 108391

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVFLLCLTMGTSLLFAQDIERNIKERLTDYFAKYTATAKISTPKLNSFDIDYDRRT
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEECCCCCEE
IQIYASESFAYQPFLPETVETIYNQMKELLPGPVNYYQITIYADGKPIEELVPNLYRSKK
EEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
KDKERMALNTEYKGAPWVKNTSRPNEISRGLQDRHIALWQSHGNYYKNDKGEWGWQRPRL
CCHHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
FCTTEDMFTQSFILPYVIPMLENAGAIVYTPRERDTQKNEIIVDNDTPNASLYLEVGSKK
EEECHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCC
ARWTTTSVKGFAQKKAIYKDGENPFTDGTSRYIQTEKKKKKNKDQAFAEWVPTLPATGKY
CEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCE
AVYVSYQTLPNSVSDAKYLVFHNGGVTEFKVNQKIGGGTWVYLGTFEFDKGNNDYGMVVL
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEE
SNESSEHGVVCADAVRFGGGMGNISRGGKISGLPRYLEGARYSSQWAGMPYDVYAGRKGE
CCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC
NDYTDDINTRSNTINYLSGGSVYNPGQTGLGVPLEMTMALHSDAGCSKDDEIIGSLGIYT
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEECCEEE
TDFNNGKLNSGMDRYASRDLADILLTQIQKDIRTNYNLPWTRRSMWNRNYSETRLPATPS
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHH
TIIELLSHQNFADMQLGHNPNFKFTVGRAIYKGILQFINSQHGKDYVVQPLPVSNFAIHF
HHHHHHHCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE
GKKKNTLELTWKGEDDPLEPTARPREYMVYTRIGYGGFDNGTLVSKPYYSVKVEPGLVYS
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEEECCCEEEE
FKVTAVNRGGESFPSEILSAYKAKRERERILIINGFDRISGPAVINTPDKAGFDLEQDPG
EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCC
VPYLSNISFCGAQSGFNRSQAGKEGEGSLGHSGRELEGMEIAGNTFDYPFIHGKAIQAAG
CCHHCCCEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCEECCCC
KYSFVSCSDEAVENGIVTLEDYPIVDYILGLEKEDPIAKAYYKTFSSPMQRLITSYCQSG
CEEEEECCHHHHHCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GHLFVSGAYVGSDMSGTQGNREFTEKVLKYGYQNSLTDKSSGQINGLGRSITIPRLPNET
CEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCC
SYAVTAPDCIVPVAPAFPVFTYARGNQSAGIAYKGADYRTFVLGFPFESIQSETDRASIM
CEEEECCCCEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCHHHHHCHHHHHHHH
AGILGFFTQK
HHHHHHHCCC
>Mature Secondary Structure
MKKIIVFLLCLTMGTSLLFAQDIERNIKERLTDYFAKYTATAKISTPKLNSFDIDYDRRT
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEECCCCCEE
IQIYASESFAYQPFLPETVETIYNQMKELLPGPVNYYQITIYADGKPIEELVPNLYRSKK
EEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHH
KDKERMALNTEYKGAPWVKNTSRPNEISRGLQDRHIALWQSHGNYYKNDKGEWGWQRPRL
CCHHHHEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
FCTTEDMFTQSFILPYVIPMLENAGAIVYTPRERDTQKNEIIVDNDTPNASLYLEVGSKK
EEECHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCC
ARWTTTSVKGFAQKKAIYKDGENPFTDGTSRYIQTEKKKKKNKDQAFAEWVPTLPATGKY
CEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCE
AVYVSYQTLPNSVSDAKYLVFHNGGVTEFKVNQKIGGGTWVYLGTFEFDKGNNDYGMVVL
EEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEE
SNESSEHGVVCADAVRFGGGMGNISRGGKISGLPRYLEGARYSSQWAGMPYDVYAGRKGE
CCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCC
NDYTDDINTRSNTINYLSGGSVYNPGQTGLGVPLEMTMALHSDAGCSKDDEIIGSLGIYT
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHEECCEEE
TDFNNGKLNSGMDRYASRDLADILLTQIQKDIRTNYNLPWTRRSMWNRNYSETRLPATPS
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCHH
TIIELLSHQNFADMQLGHNPNFKFTVGRAIYKGILQFINSQHGKDYVVQPLPVSNFAIHF
HHHHHHHCCCCCCEECCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEE
GKKKNTLELTWKGEDDPLEPTARPREYMVYTRIGYGGFDNGTLVSKPYYSVKVEPGLVYS
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCEEEEEECCCEEEE
FKVTAVNRGGESFPSEILSAYKAKRERERILIINGFDRISGPAVINTPDKAGFDLEQDPG
EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCC
VPYLSNISFCGAQSGFNRSQAGKEGEGSLGHSGRELEGMEIAGNTFDYPFIHGKAIQAAG
CCHHCCCEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCEECCCC
KYSFVSCSDEAVENGIVTLEDYPIVDYILGLEKEDPIAKAYYKTFSSPMQRLITSYCQSG
CEEEEECCHHHHHCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
GHLFVSGAYVGSDMSGTQGNREFTEKVLKYGYQNSLTDKSSGQINGLGRSITIPRLPNET
CEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEECCCCCCCC
SYAVTAPDCIVPVAPAFPVFTYARGNQSAGIAYKGADYRTFVLGFPFESIQSETDRASIM
CEEEECCCCEEECCCCCCEEEEECCCCCCCEEEECCCEEEEEEECCHHHHHCHHHHHHHH
AGILGFFTQK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA