| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345573
Identifier: 29345573
GI number: 29345573
Start: 169709
End: 169975
Strand: Reverse
Name: 29345573
Synonym: BT_0163
Alternate gene names: NA
Gene position: 169975-169709 (Counterclockwise)
Preceding gene: 29345574
Following gene: 29345572
Centisome position: 2.72
GC content: 48.69
Gene sequence:
>267_bases ATGATTGTTCCGGAAGTGTCCTCTTCCAGTACCAATGAGGCGAATGTTCCGGAAAGTTCAGCCGGTAAGTATACCTATAA AGATATTCGTGATGACCGGGTATTGACTTATTTCGACCTGCGACGGGGTGAATCGAAAACATTTACCGTAAGGTTGCAGG CAACTTATGCAGGTAACTTTATTCTTCCGGCCATTCAGTGCGAAGCTATGTACGACGCAGCGGTACAGGCACGCACCAAA GCGGGAAGAACGACTGTCAGCCGCTGA
Upstream 100 bases:
>100_bases GTCTGCGGTCACCCTATCCAATATCAGCGGTACTTCCGATTACAGCAATCTGGCACTGACGCATATCATACCGTCCGGAT GGGAAATATATAATGAACGG
Downstream 100 bases:
>100_bases CAAGACTCTGAACAATAAGACAGCATTGACAGATAGCATAAGTGCATGGGAAGCAAAATCTTGAATTTCTTCAAACGATT GTCCGTCACCAAAAAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MIVPEVSSSSTNEANVPESSAGKYTYKDIRDDRVLTYFDLRRGESKTFTVRLQATYAGNFILPAIQCEAMYDAAVQARTK AGRTTVSR
Sequences:
>Translated_88_residues MIVPEVSSSSTNEANVPESSAGKYTYKDIRDDRVLTYFDLRRGESKTFTVRLQATYAGNFILPAIQCEAMYDAAVQARTK AGRTTVSR >Mature_88_residues MIVPEVSSSSTNEANVPESSAGKYTYKDIRDDRVLTYFDLRRGESKTFTVRLQATYAGNFILPAIQCEAMYDAAVQARTK AGRTTVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9787; Mature: 9787
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVPEVSSSSTNEANVPESSAGKYTYKDIRDDRVLTYFDLRRGESKTFTVRLQATYAGNF CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCE ILPAIQCEAMYDAAVQARTKAGRTTVSR EEEEEEECHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MIVPEVSSSSTNEANVPESSAGKYTYKDIRDDRVLTYFDLRRGESKTFTVRLQATYAGNF CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCE ILPAIQCEAMYDAAVQARTKAGRTTVSR EEEEEEECHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA