Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29345567

Identifier: 29345567

GI number: 29345567

Start: 162494

End: 163084

Strand: Reverse

Name: 29345567

Synonym: BT_0157

Alternate gene names: NA

Gene position: 163084-162494 (Counterclockwise)

Preceding gene: 29345568

Following gene: 29345566

Centisome position: 2.61

GC content: 45.01

Gene sequence:

>591_bases
ATGAAAAAGTTTATTGCATTATTAGCATTAGTTTTAGTAAGTGCGAGCACAATGATGTATGCACAGGAAAGTAACGCAGC
CATCCGCCGCGCAGACAGAAAAGCAGAAAGAGACGCAGAAAGAGCAAAACTTCGCGCAGAAGAACAGGTACAGGACATGG
CAGCCTACCAGCAGGCTGTACAGGCTTTGAAGAACAAACAGTTTGTTCTGGAAGCCAATCAGGTGATCTTCCGTAACGGT
ATGAGTTCCTTCGTGACTTCCAACACTAACTTCGTCCTGATGAACGGAAACAGAGCCACTGTACAGACAGCGTTCAACAC
TCCTTATCCCGGCCCTAACGGTATCGGTGGTGTGACTGTAGACGGTAACTCTTCGGACATGAAGATGAATATCGATAAGA
AAGGAAATGTAAACTGTTCATTCAGTGTACAGGGCATCGGTATCTCAGCTCAGGTATTTATTAATATGAGCAGCGGTAAC
AACAATGCTTCGGTATCTATCAGCCCGAACTTCAATAACAACAACCTGACATTGAACGGTAACATCGTCCCACTGGATCA
GTCAAACATCTTCAAAGGACGTGCCTGGTAA

Upstream 100 bases:

>100_bases
GCTATCGGATATAAAATTGTAAAACGCCCGTGAACAATCTGGCATACACTTTGTTTTTGCAATAAACGAACAACGTATTA
AACCTAAACAAAAAAAAGTT

Downstream 100 bases:

>100_bases
TCCGAACAGAAGAATATAAGAATAACTCCGCTACAAATCGCGCAAAATGCGTACATTTGTAGCGGAGTTTTTTTAATTGA
TCATTATGAGGGAATATATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKFIALLALVLVSASTMMYAQESNAAIRRADRKAERDAERAKLRAEEQVQDMAAYQQAVQALKNKQFVLEANQVIFRNG
MSSFVTSNTNFVLMNGNRATVQTAFNTPYPGPNGIGGVTVDGNSSDMKMNIDKKGNVNCSFSVQGIGISAQVFINMSSGN
NNASVSISPNFNNNNLTLNGNIVPLDQSNIFKGRAW

Sequences:

>Translated_196_residues
MKKFIALLALVLVSASTMMYAQESNAAIRRADRKAERDAERAKLRAEEQVQDMAAYQQAVQALKNKQFVLEANQVIFRNG
MSSFVTSNTNFVLMNGNRATVQTAFNTPYPGPNGIGGVTVDGNSSDMKMNIDKKGNVNCSFSVQGIGISAQVFINMSSGN
NNASVSISPNFNNNNLTLNGNIVPLDQSNIFKGRAW
>Mature_196_residues
MKKFIALLALVLVSASTMMYAQESNAAIRRADRKAERDAERAKLRAEEQVQDMAAYQQAVQALKNKQFVLEANQVIFRNG
MSSFVTSNTNFVLMNGNRATVQTAFNTPYPGPNGIGGVTVDGNSSDMKMNIDKKGNVNCSFSVQGIGISAQVFINMSSGN
NNASVSISPNFNNNNLTLNGNIVPLDQSNIFKGRAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21306; Mature: 21306

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFIALLALVLVSASTMMYAQESNAAIRRADRKAERDAERAKLRAEEQVQDMAAYQQAV
CHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALKNKQFVLEANQVIFRNGMSSFVTSNTNFVLMNGNRATVQTAFNTPYPGPNGIGGVTV
HHHCCCEEEEECCEEEECCCCHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEE
DGNSSDMKMNIDKKGNVNCSFSVQGIGISAQVFINMSSGNNNASVSISPNFNNNNLTLNG
CCCCCCEEEECCCCCCCEEEEEEEECCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECC
NIVPLDQSNIFKGRAW
CEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKFIALLALVLVSASTMMYAQESNAAIRRADRKAERDAERAKLRAEEQVQDMAAYQQAV
CHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QALKNKQFVLEANQVIFRNGMSSFVTSNTNFVLMNGNRATVQTAFNTPYPGPNGIGGVTV
HHHCCCEEEEECCEEEECCCCHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCEEE
DGNSSDMKMNIDKKGNVNCSFSVQGIGISAQVFINMSSGNNNASVSISPNFNNNNLTLNG
CCCCCCEEEECCCCCCCEEEEEEEECCEEEEEEEEEECCCCCEEEEEECCCCCCEEEECC
NIVPLDQSNIFKGRAW
CEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA