Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345545

Identifier: 29345545

GI number: 29345545

Start: 131041

End: 131823

Strand: Reverse

Name: 29345545

Synonym: BT_0135

Alternate gene names: NA

Gene position: 131823-131041 (Counterclockwise)

Preceding gene: 29345557

Following gene: 29345544

Centisome position: 2.11

GC content: 44.57

Gene sequence:

>783_bases
ATGGATTTACGTACAGCAAACGTAACTAGATATATTCTTCCCCTGCGGGAAGGCGGATCATTGCCGGCTTTGGCTGAAGC
TGACGATGAGTTCAAATATGTCGTAAAATTCAGAGGAGCAGGCCACGGAACCAAAGCCCTTATCGCTGAATTGATCGGAG
GAGAAATAGCCCGTACTCTGGGCTTCAGAGTACCGGAGATCATCTTCCTGAATTTAGATGAAGCTTTCGGCCGAACGGAA
GCAGATGAAGAGATACAGGATTTACTGCAATGGAGCCGTGGATTGAATATCGGTTTGCATTTCTTGTCCGGAGCGTTGAC
CTTCGATCCTGTCGTACATCAAGTGGATGGTAAAACCGCCTCACAGATTGTGTGGATGGATGCTTTTCTGACAAATGTGG
ACCGTACCATCAAGAATACCAATATGCTGATGTGGCATAAAGAATTATGGCTGATCGATCATGGAGCTTCCCTTTACTTC
CAACATAGCTGGACCAACTGGCAGAAACAGGCACTCACCCCATTCGTGCAGATAAAAGATCATGTTTTATTGCCATTTGC
CGACCAACTGAAAGAAACAGATATGGCATTCAGACAGTTACTAACCTCCGATAAGATATGGGAAATAGTCAATACCGTCC
CCGACGACTGGTTGAACTGGACGGAAGGACAGGAAACTCCACAAGACCTGAGAGATATTTATATTCAATTTTTAGAGGAA
AGGATCAAGCATTCCGAACTATTTGTAAATGAAGCGCAACATGCAAGAAAGGCACTTATATGA

Upstream 100 bases:

>100_bases
CTCAACCGAAAAATATAAAAAAACTATTATTATAGGAACTCTTTCATCGACAATTTCACAAAAACGTCGTATCTTTATTC
TCAATTAAGAAAGGAGTGAT

Downstream 100 bases:

>100_bases
ATACGCAACCATTCGTTTCGTTCCCAAAGTAGAACGTGAAGAATTTATCAATGTAGGTATTGTACTGTTCTCCAAACGAT
GCAAATACCTCAAATCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE
ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF
QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE
RIKHSELFVNEAQHARKALI

Sequences:

>Translated_260_residues
MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE
ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF
QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE
RIKHSELFVNEAQHARKALI
>Mature_260_residues
MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE
ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF
QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE
RIKHSELFVNEAQHARKALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29956; Mature: 29956

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTL
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
GFRVPEIIFLNLDEAFGRTEADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTA
CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHH
SQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYFQHSWTNWQKQALTPFVQIKD
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHCC
HVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE
CEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
RIKHSELFVNEAQHARKALI
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTL
CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
GFRVPEIIFLNLDEAFGRTEADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTA
CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHH
SQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYFQHSWTNWQKQALTPFVQIKD
HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHCC
HVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE
CEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
RIKHSELFVNEAQHARKALI
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA