| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345545
Identifier: 29345545
GI number: 29345545
Start: 131041
End: 131823
Strand: Reverse
Name: 29345545
Synonym: BT_0135
Alternate gene names: NA
Gene position: 131823-131041 (Counterclockwise)
Preceding gene: 29345557
Following gene: 29345544
Centisome position: 2.11
GC content: 44.57
Gene sequence:
>783_bases ATGGATTTACGTACAGCAAACGTAACTAGATATATTCTTCCCCTGCGGGAAGGCGGATCATTGCCGGCTTTGGCTGAAGC TGACGATGAGTTCAAATATGTCGTAAAATTCAGAGGAGCAGGCCACGGAACCAAAGCCCTTATCGCTGAATTGATCGGAG GAGAAATAGCCCGTACTCTGGGCTTCAGAGTACCGGAGATCATCTTCCTGAATTTAGATGAAGCTTTCGGCCGAACGGAA GCAGATGAAGAGATACAGGATTTACTGCAATGGAGCCGTGGATTGAATATCGGTTTGCATTTCTTGTCCGGAGCGTTGAC CTTCGATCCTGTCGTACATCAAGTGGATGGTAAAACCGCCTCACAGATTGTGTGGATGGATGCTTTTCTGACAAATGTGG ACCGTACCATCAAGAATACCAATATGCTGATGTGGCATAAAGAATTATGGCTGATCGATCATGGAGCTTCCCTTTACTTC CAACATAGCTGGACCAACTGGCAGAAACAGGCACTCACCCCATTCGTGCAGATAAAAGATCATGTTTTATTGCCATTTGC CGACCAACTGAAAGAAACAGATATGGCATTCAGACAGTTACTAACCTCCGATAAGATATGGGAAATAGTCAATACCGTCC CCGACGACTGGTTGAACTGGACGGAAGGACAGGAAACTCCACAAGACCTGAGAGATATTTATATTCAATTTTTAGAGGAA AGGATCAAGCATTCCGAACTATTTGTAAATGAAGCGCAACATGCAAGAAAGGCACTTATATGA
Upstream 100 bases:
>100_bases CTCAACCGAAAAATATAAAAAAACTATTATTATAGGAACTCTTTCATCGACAATTTCACAAAAACGTCGTATCTTTATTC TCAATTAAGAAAGGAGTGAT
Downstream 100 bases:
>100_bases ATACGCAACCATTCGTTTCGTTCCCAAAGTAGAACGTGAAGAATTTATCAATGTAGGTATTGTACTGTTCTCCAAACGAT GCAAATACCTCAAATCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE RIKHSELFVNEAQHARKALI
Sequences:
>Translated_260_residues MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE RIKHSELFVNEAQHARKALI >Mature_260_residues MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTLGFRVPEIIFLNLDEAFGRTE ADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTASQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYF QHSWTNWQKQALTPFVQIKDHVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE RIKHSELFVNEAQHARKALI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29956; Mature: 29956
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTL CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GFRVPEIIFLNLDEAFGRTEADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTA CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHH SQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYFQHSWTNWQKQALTPFVQIKD HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHCC HVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE CEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHH RIKHSELFVNEAQHARKALI HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDLRTANVTRYILPLREGGSLPALAEADDEFKYVVKFRGAGHGTKALIAELIGGEIARTL CCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH GFRVPEIIFLNLDEAFGRTEADEEIQDLLQWSRGLNIGLHFLSGALTFDPVVHQVDGKTA CCCCCEEEEEECHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHH SQIVWMDAFLTNVDRTIKNTNMLMWHKELWLIDHGASLYFQHSWTNWQKQALTPFVQIKD HHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHCCHHHHHCC HVLLPFADQLKETDMAFRQLLTSDKIWEIVNTVPDDWLNWTEGQETPQDLRDIYIQFLEE CEECCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHH RIKHSELFVNEAQHARKALI HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA