Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345544

Identifier: 29345544

GI number: 29345544

Start: 130680

End: 131063

Strand: Reverse

Name: 29345544

Synonym: BT_0134

Alternate gene names: NA

Gene position: 131063-130680 (Counterclockwise)

Preceding gene: 29345545

Following gene: 29345543

Centisome position: 2.09

GC content: 41.93

Gene sequence:

>384_bases
ATGCAAGAAAGGCACTTATATGAATACGCAACCATTCGTTTCGTTCCCAAAGTAGAACGTGAAGAATTTATCAATGTAGG
TATTGTACTGTTCTCCAAACGATGCAAATACCTCAAATCACTTTATACGATAGATGAGAATAAACTGAAACTGTTTTCTT
CCGAACTGGATATGAATTGTCTGAAAGAAGGACTGCATGTCTTCGACAGGATTTGTTCGGGTAGTAAGGAAGGGGGAATG
ATAGCAAGCATGGATGTCCCCGATCGTTTCCGGTGGCTGACCGCTGTAAAAAGCTCATGTATACAAGTATCCCGCCCGCA
TCCCGGATTTTCCGAGGATTTGGATGCTACCTTGGAGCGTTTGTTCAAAGAATTAGTGCTTTAA

Upstream 100 bases:

>100_bases
ACGGAAGGACAGGAAACTCCACAAGACCTGAGAGATATTTATATTCAATTTTTAGAGGAAAGGATCAAGCATTCCGAACT
ATTTGTAAATGAAGCGCAAC

Downstream 100 bases:

>100_bases
ATGATCAATCATGGAATTTATCAAGATAACAGAGCAACCATCGCTCTATGATGACCTCGACAAGAAGTCGGTAAAAGAGA
TTCTGGAAGATATCAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MQERHLYEYATIRFVPKVEREEFINVGIVLFSKRCKYLKSLYTIDENKLKLFSSELDMNCLKEGLHVFDRICSGSKEGGM
IASMDVPDRFRWLTAVKSSCIQVSRPHPGFSEDLDATLERLFKELVL

Sequences:

>Translated_127_residues
MQERHLYEYATIRFVPKVEREEFINVGIVLFSKRCKYLKSLYTIDENKLKLFSSELDMNCLKEGLHVFDRICSGSKEGGM
IASMDVPDRFRWLTAVKSSCIQVSRPHPGFSEDLDATLERLFKELVL
>Mature_127_residues
MQERHLYEYATIRFVPKVEREEFINVGIVLFSKRCKYLKSLYTIDENKLKLFSSELDMNCLKEGLHVFDRICSGSKEGGM
IASMDVPDRFRWLTAVKSSCIQVSRPHPGFSEDLDATLERLFKELVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14783; Mature: 14783

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERHLYEYATIRFVPKVEREEFINVGIVLFSKRCKYLKSLYTIDENKLKLFSSELDMNC
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
LKEGLHVFDRICSGSKEGGMIASMDVPDRFRWLTAVKSSCIQVSRPHPGFSEDLDATLER
HHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LFKELVL
HHHHHCC
>Mature Secondary Structure
MQERHLYEYATIRFVPKVEREEFINVGIVLFSKRCKYLKSLYTIDENKLKLFSSELDMNC
CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHH
LKEGLHVFDRICSGSKEGGMIASMDVPDRFRWLTAVKSSCIQVSRPHPGFSEDLDATLER
HHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LFKELVL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA