Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345496

Identifier: 29345496

GI number: 29345496

Start: 80125

End: 81033

Strand: Reverse

Name: 29345496

Synonym: BT_0086

Alternate gene names: NA

Gene position: 81033-80125 (Counterclockwise)

Preceding gene: 29345497

Following gene: 29345495

Centisome position: 1.29

GC content: 45.54

Gene sequence:

>909_bases
ATGAAAAAGTTAATTATCATGTTCGCCCTACTCTTGGGCGTGGTTTCAATGAAAGCACAAAGTAACGATTTGTATCAGGG
CATTACTAAAAAGCTGCCTTACCGCCAAATGGTGACACCTTACGGCGTACAGGTGACGTTCGCCAAAACGGTACATATCA
TTTTCCCGTCTGCCGTTAAGTACGTGGACTTAGGCAGTAACTACATTATTGCCGGAAAAGCGGACGGGGCGGAAAATGTT
GTCAGGGTCAAGGCTACGACAGAGGGCTTTCCCGGTGAAACCAATTTTTCCGTTATCTGTGAGGATGGCAGCTTTTACAG
TTTTAACGCAAAATACGCACACGAACCGGAAATGCTGAACATCGAAATGAAAGACTTCTTGGAGAATGAGGACACAACGG
ATTTCAGCCATACCCGGATGAACATCTATTTCCGTGAACTGGGTAACGAAAGCCCGCTTTTGGTAAAGCTGATTATGCAG
TCCATCTACAAGAACAATGACCGGGAAATAAAGCATTTGGGATGCAAACGGTTCGGGGTGCAGTTCTTGGTAAAGGGGAT
TTATTCGCATAACGGGCTGTTCTACTTCCACACACAAACAAAGAACAGTTCAAACGTGCCGTTTGATACCGACTTTATCC
GTTTCAAGATTGTGGATAAGAAAGTAGCCAAAAGAACGGCTATTCAGGAAACCGTTATCGACCCGGTGCGGAGCTATAAC
GAGATACTGGTTATCGGCGGCAAAAGTACCGTCCGCACCGTGTACACCGTTCCGCAGTTCACTATCCCTGACGATAAGAT
ATTAGTCATCGAACTGGTGGAAAAGAACGGGGGCAGACACCAAACTATCCGGGTGGAAAATTCGGATGTAGTGGCTGCCA
AAGTGATTAACGAACTTAAAATCAAATGA

Upstream 100 bases:

>100_bases
GTTCAGAACGGTAAAAGTACACCTGAAAGCGAACTATCAGGTGATGCTTTACGCCAAACAACAGTAATTTATTTATCAAC
CATAAAAATTTCAATCCAAA

Downstream 100 bases:

>100_bases
ACATGAAAAGGATATGTTGTATTATATCCCTTTTTGTGCTGTGCCTGACTTTCAACCAGGCACACGCACAAAGATGTCTG
CCGGGAATGAAAGGCTTGCA

Product: conjugate transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV
VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ
SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN
EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK

Sequences:

>Translated_302_residues
MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV
VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ
SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN
EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK
>Mature_302_residues
MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVKYVDLGSNYIIAGKADGAENV
VRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLNIEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQ
SIYKNNDREIKHLGCKRFGVQFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN
EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELKIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34313; Mature: 34313

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVK
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEEECCCEE
YVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLN
EEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEE
IEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGV
EEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC
EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELK
EEEEECCCCEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEECCCEEHHHHHHHHC
IK
CC
>Mature Secondary Structure
MKKLIIMFALLLGVVSMKAQSNDLYQGITKKLPYRQMVTPYGVQVTFAKTVHIIFPSAVK
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEEEECCCEE
YVDLGSNYIIAGKADGAENVVRVKATTEGFPGETNFSVICEDGSFYSFNAKYAHEPEMLN
EEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCEEEECCCCCCCCCEEE
IEMKDFLENEDTTDFSHTRMNIYFRELGNESPLLVKLIMQSIYKNNDREIKHLGCKRFGV
EEHHHHCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
QFLVKGIYSHNGLFYFHTQTKNSSNVPFDTDFIRFKIVDKKVAKRTAIQETVIDPVRSYN
HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCC
EILVIGGKSTVRTVYTVPQFTIPDDKILVIELVEKNGGRHQTIRVENSDVVAAKVINELK
EEEEECCCCEEEEEEECCCEECCCCCEEEEEEEECCCCCEEEEEEECCCEEHHHHHHHHC
IK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA