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The map label for this gene is rsmC [H]

Identifier: 29144829

GI number: 29144829

Start: 4750627

End: 4751655

Strand: Reverse

Name: rsmC [H]

Synonym: t4599

Alternate gene names: 29144829

Gene position: 4751655-4750627 (Counterclockwise)

Preceding gene: 29144838

Following gene: 29144827

Centisome position: 99.16

GC content: 57.24

Gene sequence:

>1029_bases
ATGTCTGCTTTTACCCCGGCAAGTGAAGTCTTGCTGCGCCACAGTGATGATTTCGAACAAAGCCGTATTCTTTTTGCCGG
AGATTTGCAGGATGACCTGCCCGCGCGCTTTGAATGCGCCGCCAGCCGCGCGTATACGCAACAGTTTCACCACTGGCAGG
CGTTAAGCCGCCAGATGGGCGATAACGTCCGTTTTAGCCTGGTCGCGCAAGCCAGCGATGTCGCTGACTGCGATACGCTG
ATCTACTACTGGCCGAAAAATAAACCCGAAGCGCAGTTCCAGTTGATGAATATTTTGTCGCTGATGCCGGTGGGCAGCGA
TGTTTTCGTCGTGGGAGAAAACCGCAGCGGCGTGCGTAGCGCCGAACCGATGCTGGCGGACTATGCGCCGCTGAACAAAG
TAGATAGCGCGCGACGTTGCGGCCTTTACCATGGTCGTCTGGAAAAGCAGCCGCAGTTTAGTCTTGAATCCTGGTGGGCC
GAGTACAATATCGACGGGCTGACCATCAAAACGTTGCCGGGCGTATTCAGCCGCGACGGACTGGATGTTGGTAGCCAACT
GCTGCTGTCTACGCTGACGCCGCACACCAAAGGTAAAGTGCTGGATGTCGGCTGCGGCGCTGGCGTGCTTTCCGCCGCGC
TGGCCAGCCATTCGCCGAAAGTGCGCCTGACGCTGTGTGACGTCAGCGCGCCGGCGGTGGAAGCCAGCCGCGCCACGCTT
GCCGCTAATGGTCTTGAAGGCGAGGTATTCGCCAGCAACGTCTTTTCGGAAGTCAAAGGACGTTTTGACATGATCATCTC
CAACCCGCCGTTCCACGACGGAATGCAAACCAGCCTTGATGCGGCGCAAACGCTCATTCGCGGCGCAGTGCGCCATCTGA
ACAGCGGCGGAGAGTTACGCATCGTGGCGAACGCCTTTCTGCCCTATCCTAAGATTCTGGATGAGACCTTTGGCTTCCAT
GAAGTCATCGCGCAAACCGGGCGCTTTAAGGTTTATCGTATCGTGATGACCCGTCAGGCGAAGAAATAG

Upstream 100 bases:

>100_bases
CGAAACGCTCCTGTAATCAGGGGCGCAAATATAGCAAATCTGTCGAATCTCCGCCATCAAACTACTATAATCGCCGCCAG
TCTGAATTAAGGAGCATTCC

Downstream 100 bases:

>100_bases
TTGGCCTGATAAGCGCAGCGCCATCTGGTTGCATGTGCCGGATGGCGACGCCAGGCGTCTTATCCAACCTACGTCTCGCG
CCCATTTTTGCAGCAATCAA

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAYTQQFHHWQALSRQMGDNVRFSLVAQASDVADCDTL
IYYWPKNKPEAQFQLMNILSLMPVGSDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWA
EYNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFH
EVIAQTGRFKVYRIVMTRQAKK

Sequences:

>Translated_342_residues
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAYTQQFHHWQALSRQMGDNVRFSLVAQASDVADCDTL
IYYWPKNKPEAQFQLMNILSLMPVGSDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWA
EYNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFH
EVIAQTGRFKVYRIVMTRQAKK
>Mature_341_residues
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAYTQQFHHWQALSRQMGDNVRFSLVAQASDVADCDTLI
YYWPKNKPEAQFQLMNILSLMPVGSDVFVVGENRSGVRSAEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAE
YNIDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLA
ANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPKILDETFGFHE
VIAQTGRFKVYRIVMTRQAKK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=342, Percent_Identity=90.6432748538012, Blast_Score=654, Evalue=0.0,
Organism=Escherichia coli, GI87082206, Length=194, Percent_Identity=32.4742268041237, Blast_Score=101, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37626; Mature: 37495

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAYTQQFHHWQALSRQMG
CCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DNVRFSLVAQASDVADCDTLIYYWPKNKPEAQFQLMNILSLMPVGSDVFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAEYNIDGLTIKTLPGVFSRDG
CCCHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPKILDETFGFHEVIAQTGRFKVYRIVMTRQAKK
EEEECCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEEHHCCCC
>Mature Secondary Structure 
SAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARFECAASRAYTQQFHHWQALSRQMG
CCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
DNVRFSLVAQASDVADCDTLIYYWPKNKPEAQFQLMNILSLMPVGSDVFVVGENRSGVRS
CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
AEPMLADYAPLNKVDSARRCGLYHGRLEKQPQFSLESWWAEYNIDGLTIKTLPGVFSRDG
CCCHHHHCCCCCCCCHHHHCCCHHCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCC
LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATL
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCEE
AANGLEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELR
EECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
IVANAFLPYPKILDETFGFHEVIAQTGRFKVYRIVMTRQAKK
EEEECCCCCHHHHHHHCCHHHHHHCCCCEEEEEEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA