| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144145
Identifier: 29144145
GI number: 29144145
Start: 3996557
End: 3997096
Strand: Reverse
Name: 29144145
Synonym: t3869
Alternate gene names: NA
Gene position: 3997096-3996557 (Counterclockwise)
Preceding gene: 29144146
Following gene: 29144135
Centisome position: 83.41
GC content: 49.63
Gene sequence:
>540_bases ATGTCGAAATCATCATGGTTATTACTTTTGGGTTTATGCGCCAGCGGCTCCGCGCTTGCGGCATCCTCAGAATCCGCTTT TCTGGCGCAACATGGGCTGGCGGGAAAAACGGTTGAGCAGATCGTGGATACGATTGATCAGACGCCGCAGAGCCGTCCTT TGCCTTACTCCGCGTCGATTACCAGTACCGAGCTCAAATTATCTGACGGAGAGCAGATTTATACGCTACCGTTAGGCGAC AAATTCTATCTCTCTTTTGCGCCCTATGAATGGCGGACACACCCCTGTTTTAACCACAGCCTTTCCGGCTGTCAGGGAGA AATGCCGAATAAACCGTTCACTGTAAAAGTGACAGACAGTAAAGGCGCTGTCATCGTACAAAAAGAGATGCAAAGCTATC GAAACGGATTTATCGGTGTTTGGCTACCGCGCAATATGGAAGGGACGCTCGAAGTAAGCTACAACGGTAAAACGGCGTCA CATGCCATTGCCACCAGAGATGACAGCCAGACCTGTCTGACGGAATTACCATTACGTTAA
Upstream 100 bases:
>100_bases CCAGCATAACTTTGCATTACTTTACCCTGCGTCCCTTTGACCTTTCCCTTAGGGGAACCCCTATAGTAGGCAAGGAGATT GTTCACAAGGAATTGAAGTT
Downstream 100 bases:
>100_bases AAAAATGCCCGATAACATAATGGGTTATCGGGCCTATAAAACGCCAACAAGATAAAATTAACAGAGTGCCTTGAGAATGC ATAACGCCACAAGAATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGD KFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTAS HAIATRDDSQTCLTELPLR
Sequences:
>Translated_179_residues MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGD KFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTAS HAIATRDDSQTCLTELPLR >Mature_178_residues SKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGDK FYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASH AIATRDDSQTCLTELPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19565; Mature: 19434
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASI CCCCCEEEEEEECCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDS EEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC KGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASHAIATRDDSQTCLTELPLR CCEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCC >Mature Secondary Structure SKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASI CCCCEEEEEEECCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDS EEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC KGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASHAIATRDDSQTCLTELPLR CCEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA