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The map label for this gene is yicC [H]

Identifier: 29144063

GI number: 29144063

Start: 3905412

End: 3906275

Strand: Reverse

Name: yicC [H]

Synonym: t3783

Alternate gene names: 29144063

Gene position: 3906275-3905412 (Counterclockwise)

Preceding gene: 29144066

Following gene: 29144061

Centisome position: 81.52

GC content: 53.01

Gene sequence:

>864_bases
ATGATCCGCAGTATGACCGCCTACGCCCGGCGTGAAATCAAGGGTGAATGGGGTAGCGCGACCTGGGAAATGCGCTCGGT
AAACCAGCGTTATCTGGAAACTTACTTTCGTCTGCCGGAACAGTTCCGTAGTCTTGAACCCGTCGTGCGCGAACGCATTC
GTACACGCCTGACGCGCGGCAAAGTCGAATGTATGCTGCGTTTTGAACCCGATGCCAGCGCGCAAGGCGAGCTTATTCTG
AATGAAAAGCTCGCGAAACAATTAGTTAGCGCCGCAAACTGGGTCAAAATGCAGAGCGACGAAGGGGAAATCAATCCGGT
TGATATTTTGCGCTGGCCAGGTGTCATGGCGGCGCAAGAGCAGGATCTGGACGCGATTGCCGCAGAAATTTTAGCCGCAC
TGGACGGTACGCTGGATGACTTTATCGTCGCGCGCGAAACGGAAGGCCAGGCGCTGAAAGCGCTGATTGAACAACGTCTG
GAAGGCGTCAGCGCCGAAGTAGCGAAAGTCCGCGCGCATATGCCGGAAATCCTGCAATGGCAGCGTGAACGCCTGGTCGC
GAAGCTGGAAGATGCTCAGGTTCAGTTGGAAAACAACCGTCTGGAGCAAGAGCTGGTGATGATGGCGCAGCGCATTGATG
TGGCGGAAGAGCTGGATCGTCTCGAAGCGCACGTCAAAGAGACTTACAACATTCTGAAGAAAAAAGAGGCGGTAGGTCGC
CGTCTGGACTTCATGATGCAAGAATTTAACCGTGAGTCGAACACCCTGGCCTCTAAATCCATCAACGCTGATGTAACTAA
CTCCGCTATTGAATTAAAAGTGTTGATCGAGCAAATGCGCGAGCAGATCCAGAATATTGAATAA

Upstream 100 bases:

>100_bases
TGTGGCTGCGCATTATACGGACTTCCGATGGTTATTCCTATCCTGACAAGGCATGGATAGCTATAATCCCCTCATCTCTC
CTTTAAAAACGGGAACATCT

Downstream 100 bases:

>100_bases
TTCTGGCGCTCAATATGTCACAGAGTCCGCCTTATGCGGGCTCTCGCGTTTATCGGTAGTACGTTTTTAATTTCCGGCGA
ATAGCGTCGATAAGGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRTRLTRGKVECMLRFEPDASAQGELIL
NEKLAKQLVSAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINADVTNSAIELKVLIEQMREQIQNIE

Sequences:

>Translated_287_residues
MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRTRLTRGKVECMLRFEPDASAQGELIL
NEKLAKQLVSAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINADVTNSAIELKVLIEQMREQIQNIE
>Mature_287_residues
MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRTRLTRGKVECMLRFEPDASAQGELIL
NEKLAKQLVSAANWVKMQSDEGEINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
EGVSAEVAKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
RLDFMMQEFNRESNTLASKSINADVTNSAIELKVLIEQMREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=96.1672473867596, Blast_Score=541, Evalue=1e-155,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33125; Mature: 33125

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRTRLTRG
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECMLRFEPDASAQGELILNEKLAKQLVSAANWVKMQSDEGEINPVDILRWPGVMAAQE
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEECCCCHHCCH
QDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVSAEVAKVRAHMPEILQW
HHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDFMMQEFNRESNTLASKSINADVTNSAIELKVLIEQMREQIQNIE
HHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRSLEPVVRERIRTRLTRG
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
KVECMLRFEPDASAQGELILNEKLAKQLVSAANWVKMQSDEGEINPVDILRWPGVMAAQE
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHEECCCCHHCCH
QDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRLEGVSAEVAKVRAHMPEILQW
HHHHHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
QRERLVAKLEDAQVQLENNRLEQELVMMAQRIDVAEELDRLEAHVKETYNILKKKEAVGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLDFMMQEFNRESNTLASKSINADVTNSAIELKVLIEQMREQIQNIE
HHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]