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The map label for this gene is dsdX [H]

Identifier: 29144008

GI number: 29144008

Start: 3829783

End: 3831120

Strand: Reverse

Name: dsdX [H]

Synonym: t3716

Alternate gene names: 29144008

Gene position: 3831120-3829783 (Counterclockwise)

Preceding gene: 29144011

Following gene: 29144007

Centisome position: 79.95

GC content: 56.28

Gene sequence:

>1338_bases
ATGCACGCTCAAATCTGGGTAGTGAGCACGCTGCTGATCAGCATCGTGTTAATCGTATTGACCATCGTGAAGTTTAAATT
CCACCCCTTCCTGGCGTTACTGCTCGCCAGTTTCTTTGTCGGCGCGATGATGGGCATAGGGCCGCTGGAGATGGTCACGG
CGATAGAAAACGGAATAGGCGGTACGCTCGGTTTTCTGGCCGCCGTTATCGGTCTTGGCACCATCCTCGGCAAAATGATG
GAGGTTTCCGGCGCGGCGGAACGCATCGGGCTTACGCTCCAGCGCTGCCGCTGGCTCTCTGCTGACGTGATCATGGTACT
GGTGGGGCTGATTTGCGGAATCACGTTGTTCGTGGAAGTGGGCGTCGTGTTGCTCATCCCACTGGCGTTTTCTATCGCTA
AAAAGACCCATACCTCGCTGCTGAAGCTGGCCATTCCGCTGTGTACCGCGCTGATGGCCGTCCATTGCGTGGTACCGCCG
CATCCGGCTGCGCTGTTTGTCGCAAATAAACTGGGGGCGGATATCGGCTCGGTGATTGTCTACGGTCTGCTGGTCGGACT
GATGGCCTCATTGGTCGGCGGCCCGCTGTTCTTAAAGTTTCTGGGTAATCGTCTGCCGTTCAAGCCCGTACCGACAGAGT
TTGCGGATCTTGAAGTGCGTGCCGAAAACACCCTGCCGTCGCTGGGCGCAACGCTGTTTACCGTTCTGCTGCCGATTGGC
CTGATGCTGGTGAAAACCGTCGCTGAACTGAATATGGCGAAAGACGGCACGTTGTATACGCTGCTGGAGTTTATCGGTAA
TCCGATCACCGCGATGTTTATCGCTGTCTTTGTGGCGTATTACATACTCGGTCTGCGCCAGCATATGGGTATGAGCGCGC
TACTTACCCACACCGAAAACGGCTTTGGCGCCATTGCGAACATCCTGCTGATTATCGGCGCGGGCGGCGCGTTCAACGCC
ATTCTCAAAAGTAGCGGACTGGCGGACACGCTGGCGGTGATCCTCTCAAATATGCATATGCACCCGATTCTGCTGGCATG
GCTGGTAGCGCTGATTCTGCACGCGGCGGTCGGCTCTGCGACGGTGGCGATGATGGGCGCCACCGCGATTGTTGCGCCCA
TGCTGCCGCTCTATCCTGACGTTAGCCCGGAGATCATCGCTATTGCCATCGGTTCCGGCACCATTGGCTGCACGATCGTG
ACCGATTCCCTGTTCTGGCTGGTCAAGCAGTATTGCGGCGCTACGCTGAATGAAACGTTTAAATACTATACGACGGCCAC
GTTTATCGCATCTGTCGTTGCACTGGCTGGCACATTCCTGCTTTCCTTTATCATCTGA

Upstream 100 bases:

>100_bases
TGATTCAATTTACATCATGTGAATGGCAAATTATATCGTTTGTCAGGGTGTGCTGTTTTTCTGTCCAATAAGAACAGATT
AATCACAGGGTAGGTGAGAT

Downstream 100 bases:

>100_bases
TCGTAAAGAGACGTACTATGGAAAACATACTAAAGCTCATCGCCCGGTATCCTTTGGTCGAGGATCTGGTCGCCCTCAAA
GAAACCACCTGGTTTAACCC

Product: permease DsdX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGIGPLEMVTAIENGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPP
HPAALFVANKLGADIGSVIVYGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIG
LMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMSALLTHTENGFGAIANILLIIGAGGAFNA
ILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDVSPEIIAIAIGSGTIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII

Sequences:

>Translated_445_residues
MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGIGPLEMVTAIENGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPP
HPAALFVANKLGADIGSVIVYGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIG
LMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMSALLTHTENGFGAIANILLIIGAGGAFNA
ILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDVSPEIIAIAIGSGTIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII
>Mature_445_residues
MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGIGPLEMVTAIENGIGGTLGFLAAVIGLGTILGKMM
EVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEVGVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPP
HPAALFVANKLGADIGSVIVYGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIG
LMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMSALLTHTENGFGAIANILLIIGAGGAFNA
ILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSATVAMMGATAIVAPMLPLYPDVSPEIIAIAIGSGTIGCTIV
TDSLFWLVKQYCGATLNETFKYYTTATFIASVVALAGTFLLSFII

Specific function: Probable permease for an unknown substrate [H]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1788707, Length=445, Percent_Identity=92.5842696629213, Blast_Score=820, Evalue=0.0,
Organism=Escherichia coli, GI48994935, Length=439, Percent_Identity=35.7630979498861, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1790716, Length=429, Percent_Identity=34.032634032634, Blast_Score=251, Evalue=9e-68,
Organism=Escherichia coli, GI1790776, Length=446, Percent_Identity=31.8385650224215, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI2367370, Length=427, Percent_Identity=33.7236533957845, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI48994939, Length=429, Percent_Identity=34.7319347319347, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789097, Length=439, Percent_Identity=30.2961275626424, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46890; Mature: 46890

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGIGPLEMVTAIENGIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKLGADIGSVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
YGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIG
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHH
LMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMSALLTHTEN
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GFGAIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSA
CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVAPMLPLYPDVSPEIIAIAIGSGTIGCTIVTDSLFWLVKQYCGATLNETF
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCHHHHH
KYYTTATFIASVVALAGTFLLSFII
HHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHAQIWVVSTLLISIVLIVLTIVKFKFHPFLALLLASFFVGAMMGIGPLEMVTAIENGIG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
GTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVIMVLVGLICGITLFVEV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GVVLLIPLAFSIAKKTHTSLLKLAIPLCTALMAVHCVVPPHPAALFVANKLGADIGSVIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
YGLLVGLMASLVGGPLFLKFLGNRLPFKPVPTEFADLEVRAENTLPSLGATLFTVLLPIG
HHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHH
LMLVKTVAELNMAKDGTLYTLLEFIGNPITAMFIAVFVAYYILGLRQHMGMSALLTHTEN
HHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
GFGAIANILLIIGAGGAFNAILKSSGLADTLAVILSNMHMHPILLAWLVALILHAAVGSA
CHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
TVAMMGATAIVAPMLPLYPDVSPEIIAIAIGSGTIGCTIVTDSLFWLVKQYCGATLNETF
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHCCCHHHHH
KYYTTATFIASVVALAGTFLLSFII
HHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592420; 3275618; 9205837; 9278503; 3029015; 1659648; 12218016 [H]