| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is yihX [H]
Identifier: 29143896
GI number: 29143896
Start: 3693643
End: 3694242
Strand: Reverse
Name: yihX [H]
Synonym: t3595
Alternate gene names: 29143896
Gene position: 3694242-3693643 (Counterclockwise)
Preceding gene: 29143897
Following gene: 29143895
Centisome position: 77.09
GC content: 49.67
Gene sequence:
>600_bases ATGCTCTACATCTTTGATTTAGGTAATGTGATTGTCGATATCGACTTTAACCGCGTATTAGGTGTGTGGAGCGACCTGAG TCGAGTACCGTTGGCTTCGCTGAAGCAAAAATTTACGATGGGCGAGACTTTTCACCAACATGAACGCGGTGAGATAACGG ACGAAGCGTTTGCTGAAGCTTTCTGTCATGAAATGGCGTTATCGCTCAGTTATGAACAATTTGCGCACGGCTGGCAGGCG GTATTTGTCGGATTACGGCCCGAAGTGATTGCTATCATGCATAAACTGCGCGAGCAGGGGCATCGCGTGGTGGTGTTATC CAATACTAACCGACTGCATACCCACTTCTGGCCGGAGGAATACCCGGAGGTGCGCGCTGCCGCCGACCATATCTATTTAT CGCAGGATTTGGGAATGCGTAAACCGGAAGCGCGTATTTATCAGCACGTCCTGCAGAAAGAAGGTTTTTCCGCTGCCGAT GCGGTCTTTTTCGACGACAATGCCGATAATATAGAAGGGGCCAACCAGTTGGGGATCACCAGCATTCTGGTGAAGGATAA AGCCACCATCCCTGACTATTTCGCGAAGCTGTTATGCTAA
Upstream 100 bases:
>100_bases TTTCTATTGTCTTTTTGTTAATTGATTTATAAAGGGATACATAGTCAAACTTCTCCTTTCCCGCTACAGTTATTCATCCC CGGTTAGCAAGGAGAATGAC
Downstream 100 bases:
>100_bases AAACCGTTCACCAAAAAGCTGGACGCCATACGCGCCCTGTTCGGGCCTGGCTCAAGCTATTATGGCAGCGTATCGATGAG GATAATATGACGACTCTGGC
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETFHQHERGEITDEAFAEAFCHEMALSLSYEQFAHGWQA VFVGLRPEVIAIMHKLREQGHRVVVLSNTNRLHTHFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAAD AVFFDDNADNIEGANQLGITSILVKDKATIPDYFAKLLC
Sequences:
>Translated_199_residues MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETFHQHERGEITDEAFAEAFCHEMALSLSYEQFAHGWQA VFVGLRPEVIAIMHKLREQGHRVVVLSNTNRLHTHFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAAD AVFFDDNADNIEGANQLGITSILVKDKATIPDYFAKLLC >Mature_199_residues MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETFHQHERGEITDEAFAEAFCHEMALSLSYEQFAHGWQA VFVGLRPEVIAIMHKLREQGHRVVVLSNTNRLHTHFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAAD AVFFDDNADNIEGANQLGITSILVKDKATIPDYFAKLLC
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=199, Percent_Identity=89.4472361809045, Blast_Score=380, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22722; Mature: 22722
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETFHQHERGEITDEAFAEA CEEEEECCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FCHEMALSLSYEQFAHGWQAVFVGLRPEVIAIMHKLREQGHRVVVLSNTNRLHTHFWPEE HHHHHHHHCCHHHHHCCHHHEEECCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCH YPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAADAVFFDDNADNIEGANQLGIT HHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCE SILVKDKATIPDYFAKLLC EEEECCCCCCHHHHHHHCC >Mature Secondary Structure MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLASLKQKFTMGETFHQHERGEITDEAFAEA CEEEEECCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FCHEMALSLSYEQFAHGWQAVFVGLRPEVIAIMHKLREQGHRVVVLSNTNRLHTHFWPEE HHHHHHHHCCHHHHHCCHHHEEECCCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCH YPEVRAAADHIYLSQDLGMRKPEARIYQHVLQKEGFSAADAVFFDDNADNIEGANQLGIT HHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCE SILVKDKATIPDYFAKLLC EEEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]