| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is ampH [H]
Identifier: 29142875
GI number: 29142875
Start: 2559577
End: 2560734
Strand: Direct
Name: ampH [H]
Synonym: t2489
Alternate gene names: 29142875
Gene position: 2559577-2560734 (Clockwise)
Preceding gene: 29142872
Following gene: 29142878
Centisome position: 53.41
GC content: 53.54
Gene sequence:
>1158_bases TTGAAACGTAGTCTGCTTTTTACTGCCATGCTGTTTGCGGCATCACTTACTTCTGTCCAGGCGGCTCAGCCGATTGCCGA TCCGGTTTTTGCCTCTGATATCGTTGATCGTTATGCCGAGCATATCTTTTATGGTAGCGGCGCCACGGGCATGGCGCTGG TGGTGATCGACGGCAATCAACGCGTGTTTCGTAGTTTCGGTGACACCAGACCGGGCAATAATGTTCGTCCACAGCTTGAC TCGGTCATTCGTATCGCTTCTCTCACCAAGCTCATGACCAGTGAAATGTTGGTAAAATTGCTCGATCAGGGAACGGTAAA ATTAAACGATCCGCTCAGCAAATATGCGCCTCCCGGCGCGCATGTCCCGACGTATCAAGGCACGCCGATTACGTTGGTCA ACTTAGCGACCCACACCAGCGCGCTTCCGCGAGAACAGCCCGGCGGCGCGGCGCATCGTCCGGTATTTGTCTGGCCAACC CGCGAACAACGCTGGAACTGGCTCTCCACAGCAACGTTAAAAGTCGCGCCCGGTTCACAGGCGGCCTATTCCAATCTGGC GTTCGACCTGTTAGCCGACGCGCTGGCGACCGCCTCCGGCAAACCTTATACGCAACTGTTTGAAGAAAAGATTACCCGCC CGCTGGGAATGAAAGACACCACGTTTACCCCCTCTCCCGATCAGTGTAAGCGTCTGATGGTGGCAGAGAAAGGCGCAAGC CCCTGTAATAATACGCTGGCTGCCATTGGCAGCGGCGGAGTCTATTCTACGCCAGGAGATATGATGCGCTGGATGCAACA GTATCTGTCGTCAGATTTCTATCACCGTAGCCATCAGGCCGATCGTATGCAAACGTTGATTTATCAGCGCGCACAGTTAA AGAAAATCATCGGGATGGACGTACCGGGTAAAGCCGACGCGCTCGGTCTGGGCTGGGTCTATATGGCGCCAAAAGACGGA CGTCCTGGCATTATCCAGAAAACGGGAGGCGGCGGCGGTTTTATTACCTATATGGCGATGATCCCACAATATAATATTGG CGCTTTTGTGGTCGTAACCCGTTCCCCCCTCACCCGTTTTACCAATATGAGCGACGGGATTAACGATTTGGTTACTGAGC TAAGCGGCAATAAACCGATTGCTATTCCTGCATCCTGA
Upstream 100 bases:
>100_bases ACGTTTTTTCACCCACTTTTTTCTCTTTAACGTTTTGCAATGTGCCGCCGGGTAGTATAAATACGCATAACCACCGTTAT TTCACTTATGGACATCACCG
Downstream 100 bases:
>100_bases GTCGTCGCGCCTCGCGCTATATCAGACGAGGCGCGACATTTTTGTTAATATTCGGAGGGCAAACGGTTAATACTGATCAA TTTGCCTTTATTCATTTCAA
Product: beta-lactam binding protein AmpH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYGSGATGMALVVIDGNQRVFRSFGDTRPGNNVRPQLD SVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGAHVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWNWLSTATLKVAPGSQAAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTFTPSPDQCKRLMVAEKGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQADRMQTLIYQRAQLKKIIGMDVPGKADALGLGWVYMAPKDG RPGIIQKTGGGGGFITYMAMIPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSGNKPIAIPAS
Sequences:
>Translated_385_residues MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYGSGATGMALVVIDGNQRVFRSFGDTRPGNNVRPQLD SVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGAHVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWNWLSTATLKVAPGSQAAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTFTPSPDQCKRLMVAEKGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQADRMQTLIYQRAQLKKIIGMDVPGKADALGLGWVYMAPKDG RPGIIQKTGGGGGFITYMAMIPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSGNKPIAIPAS >Mature_385_residues MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYGSGATGMALVVIDGNQRVFRSFGDTRPGNNVRPQLD SVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGAHVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT REQRWNWLSTATLKVAPGSQAAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTFTPSPDQCKRLMVAEKGAS PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQADRMQTLIYQRAQLKKIIGMDVPGKADALGLGWVYMAPKDG RPGIIQKTGGGGGFITYMAMIPQYNIGAFVVVTRSPLTRFTNMSDGINDLVTELSGNKPIAIPAS
Specific function: Binds penicillin and contributes to the normal morphology [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI239747261, Length=356, Percent_Identity=28.0898876404494, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI239752721, Length=356, Percent_Identity=28.0898876404494, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI239741085, Length=356, Percent_Identity=28.0898876404494, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1786574, Length=385, Percent_Identity=91.6883116883117, Blast_Score=738, Evalue=0.0, Organism=Escherichia coli, GI87082101, Length=246, Percent_Identity=26.4227642276423, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41780; Mature: 41780
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYGSGATGMALVVIDGNQ CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCH RVFRSFGDTRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCC HVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWNWLSTATLKVAPGSQ CCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCEEEECCHHHHCCEEEEEEEEECCCCH AAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTFTPSPDQCKRLMVAEKGAS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQADRMQTLIYQRAQLKKIIGMD CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VPGKADALGLGWVYMAPKDGRPGIIQKTGGGGGFITYMAMIPQYNIGAFVVVTRSPLTRF CCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHH TNMSDGINDLVTELSGNKPIAIPAS CCCCCCHHHHHHHHCCCCCEEECCC >Mature Secondary Structure MKRSLLFTAMLFAASLTSVQAAQPIADPVFASDIVDRYAEHIFYGSGATGMALVVIDGNQ CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCCCEEEEEECCCH RVFRSFGDTRPGNNVRPQLDSVIRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCC HVPTYQGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWNWLSTATLKVAPGSQ CCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCEEEECCHHHHCCEEEEEEEEECCCCH AAYSNLAFDLLADALATASGKPYTQLFEEKITRPLGMKDTTFTPSPDQCKRLMVAEKGAS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYHRSHQADRMQTLIYQRAQLKKIIGMD CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VPGKADALGLGWVYMAPKDGRPGIIQKTGGGGGFITYMAMIPQYNIGAFVVVTRSPLTRF CCCCCCCEEEEEEEECCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHH TNMSDGINDLVTELSGNKPIAIPAS CCCCCCHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]