Click here to switch to the map view.

The map label for this gene is yajR [H]

Identifier: 29142815

GI number: 29142815

Start: 2499173

End: 2500537

Strand: Direct

Name: yajR [H]

Synonym: t2427

Alternate gene names: 29142815

Gene position: 2499173-2500537 (Clockwise)

Preceding gene: 29142809

Following gene: 29142817

Centisome position: 52.15

GC content: 55.46

Gene sequence:

>1365_bases
ATGAACGATTATAAAATGACGCCAGGGGAGCTGCGCGCCACATGGGGTTTAGGGACCGTCTTTTCGTTGCGTATGCTGGG
CATGTTTATGGTTCTACCAGTACTGACCACATACGGTATGGCGCTACAGGGCGCCAGCGAAGCATTAATCGGCATTGCGA
TCGGTATTTACGGGCTGGCGCAGGCTATCTTTCAAATTCCCTTTGGGCTGCTGTCCGACCGCATTGGCCGTAAACCGCTG
ATTGTCGGCGGACTGGCGGTATTTGTCGCGGGTAGCGTCATTGCCGCGCTCTCCCACTCTATCTGGGGCATTATTCTGGG
GCGAGCGCTACAGGGGTCCGGCGCTATTGCCGCCGCCGTCATGGCGCTCCTGTCTGATCTGACCCGAGAGCAAAACCGCA
CCAAAGCGATGGCGTTTATCGGCGTCAGCTTTGGTATCACCTTCGCGATTGCGATGGTATTAGGGCCGATTGTTACCCAT
AGTCTGGGATTGAACGCGTTGTTCTGGATGATCGCCGCCCTCGCCACCCTGGGCATTCTTCTGACGATCTGGGTGGTTCC
CAACAGTACCAACCATGTGCTGAATCGCGAATCCGGGATGGTCAAAGGCAGCTTCAGTAAAGTGCTGGCGGAGCCGAGGC
TGCTCAAGCTCAACTTCGGCATCATGTGTCTGCATATTTTATTGATGTCCACCTTTGTCGCCCTGCCCGGCCAGCTTGCC
GATGCCGGTTTCCCTGCCGCCGAACACTGGAAGGTGTATCTGGCAACCATGGTGATCGCCTTTGCCGCCGTCGTGCCTTT
TATCATCTATGCTGAAGTCAAACGGCGGATGAAGCAGGTATTCCTGTTCTGCGTGGGGCTCATTATCGTCGCAGAAATCG
TGTTGTGGGGAGCGGGCCAGCATTTCTGGGAGCTGGTGATTGGCGTACAACTCTTTTTCCTCGCCTTTAATCTGATGGAG
GCGCTGCTGCCTTCGCTTATTAGCAAAGAGTCGCCCGCGGGGTATAAAGGAACGGCGATGGGCGTCTATTCTACCAGTCA
GTTTCTTGGCGTGGCGCTTGGCGGCTCGCTGGGCGGCTGGATAGACGGCACGTTTGATGGGCAAACCGTTTTCCTTGCCG
GGGCCGTACTGGCGATGGTATGGCTGGCGGTGGCAAGTACCATGAAAGAGCCGCCCTATGTCAGCAGCCTGCGTGTGGAA
ATTCCAGCGGATATCGTTGCTGACGACAGGCTAAAACAGCGACTGTTGGCAATGAAAGGCGTAAGCGAAGCGCTGATCGT
GGCGGAAGAGCATTCCGCTTACGTCAAAATCGACAGCAAAGTGACCAATCGCTTTGAAGTTGAACAGCTTATCAGCAAAG
GATGA

Upstream 100 bases:

>100_bases
GCTCAACTGTTTCAAAAACATAATATTTGCTAATTAACCCTCTATTTACCCGGCACACTCCCCGCACTACACTACTCCCA
GCTTTTATACAGAGGTGGCA

Downstream 100 bases:

>100_bases
ATGCAGCATTGCCGGATGGCGGCGAGGCTCTATCCGGCATAACAACTTAATCGCGGAAGTTTTTGAACTGGAACGGCTGG
CCTAAATCGTCGCCGCGAAC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPL
IVGGLAVFVAGSVIAALSHSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTH
SLGLNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA
DAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVFLFCVGLIIVAEIVLWGAGQHFWELVIGVQLFFLAFNLME
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRVE
IPADIVADDRLKQRLLAMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG

Sequences:

>Translated_454_residues
MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPL
IVGGLAVFVAGSVIAALSHSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTH
SLGLNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA
DAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVFLFCVGLIIVAEIVLWGAGQHFWELVIGVQLFFLAFNLME
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRVE
IPADIVADDRLKQRLLAMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG
>Mature_454_residues
MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLAQAIFQIPFGLLSDRIGRKPL
IVGGLAVFVAGSVIAALSHSIWGIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTH
SLGLNALFWMIAALATLGILLTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA
DAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVFLFCVGLIIVAEIVLWGAGQHFWELVIGVQLFFLAFNLME
ALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGGSLGGWIDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRVE
IPADIVADDRLKQRLLAMKGVSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=453, Percent_Identity=88.5209713024283, Blast_Score=812, Evalue=0.0,
Organism=Escherichia coli, GI1790146, Length=152, Percent_Identity=31.5789473684211, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48672; Mature: 48672

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLA
CCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIWGIILGRALQGSGAIAAAV
HHHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTHSLGLNALFWMIAALATLGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA
HHHHCCCCCCCHHHCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCHHH
DAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVFLFCVGLIIVAEIVLWGAGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
HFWELVIGVQLFFLAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGGSLGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCC
IDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRVEIPADIVADDRLKQRLLAMKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
VSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG
CCHHEEEEECCCCEEEECHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDYKMTPGELRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQGASEALIGIAIGIYGLA
CCCCCCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
QAIFQIPFGLLSDRIGRKPLIVGGLAVFVAGSVIAALSHSIWGIILGRALQGSGAIAAAV
HHHHHCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIVTHSLGLNALFWMIAALATLGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIWVVPNSTNHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHILLMSTFVALPGQLA
HHHHCCCCCCCHHHCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCHHH
DAGFPAAEHWKVYLATMVIAFAAVVPFIIYAEVKRRMKQVFLFCVGLIIVAEIVLWGAGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
HFWELVIGVQLFFLAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVALGGSLGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCCC
IDGTFDGQTVFLAGAVLAMVWLAVASTMKEPPYVSSLRVEIPADIVADDRLKQRLLAMKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
VSEALIVAEEHSAYVKIDSKVTNRFEVEQLISKG
CCHHEEEEECCCCEEEECHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]