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The map label for this gene is ydbJ [H]

Identifier: 29141993

GI number: 29141993

Start: 1609099

End: 1609254

Strand: Reverse

Name: ydbJ [H]

Synonym: t1552

Alternate gene names: 29141993

Gene position: 1609254-1609099 (Counterclockwise)

Preceding gene: 29141995

Following gene: 29141990

Centisome position: 33.58

GC content: 57.05

Gene sequence:

>156_bases
ATGTCCAGCGCCGGCGAAGCGAATTGCGCTATGATTGGCGGTTCGCTTTCAGCGGCCCGGCAGCTTGATGGTTCAGTAAT
TGGTATGTGCGCGCTACCCAACGGCAAACGTTGTAGCGAACAGTCGCTTGCCGCCGGAAGCTGCGGGAGTTATTAA

Upstream 100 bases:

>100_bases
GTTTTGGGTGGGATGTGCCGCGTTATTATTGTCGGCTTGCAGTAGCGAACCTGTTCAGCAGGCAACTGCGGCGCATGTTT
CGCCAGGGATGAAAGCGGCG

Downstream 100 bases:

>100_bases
GCGCGGCGTTTCGCCTGACGCGTATAACTTTTCACTTAATGGCTTAGTGCGCTAAATCCGCCAGTTTATACATTAGCGTT
GTTTCTGCCGTCGCCAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 50

Protein sequence:

>51_residues
MSSAGEANCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY

Sequences:

>Translated_51_residues
MSSAGEANCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY
>Mature_50_residues
SSAGEANCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081894, Length=51, Percent_Identity=92.156862745098, Blast_Score=96, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 4970; Mature: 4838

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
13.7 %Cys+Met (Translated Protein)
8.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
12.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAGEANCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY
CCCCCCCCEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSAGEANCAMIGGSLSAARQLDGSVIGMCALPNGKRCSEQSLAAGSCGSY
CCCCCCCEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]