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The map label for this gene is ynbE [H]

Identifier: 29141990

GI number: 29141990

Start: 1604450

End: 1604641

Strand: Reverse

Name: ynbE [H]

Synonym: t1548

Alternate gene names: 29141990

Gene position: 1604641-1604450 (Counterclockwise)

Preceding gene: 29141993

Following gene: 29141989

Centisome position: 33.49

GC content: 45.83

Gene sequence:

>192_bases
ATGAAAATGAGTATTGCCATGCTGTCAGCGCTTGCGTCATTTATCGTGGTGGGGTGCACGCCACGTATTGAAGTCGCCGC
GCCGGAACAGCCGATTACCATCAACATGAATGTAAAGATCGAGCATGAAATACATATCAAAGTCGATAAAGACGTTGAAG
AACTCCTGAAATCACGCAGCGATCTATTCTGA

Upstream 100 bases:

>100_bases
GCAGTTTGCGTTTTGGCGACAATTTACAGGCATGGCTTGAACAAAATACAGCGTTGCCGCAACCTCCTTGCCGGAAAGAC
AAGGACTGTGAGGATAAATA

Downstream 100 bases:

>100_bases
GGCCATAATGAAAAAGTATTTAATACTATGGGTGCTGACGCTGAGCTTGCTCACACCTTCTGTGTGGGCCTTAACCCTGG
ACGAAGCGCGCACGCAGGGC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEIHIKVDKDVEELLKSRSDLF

Sequences:

>Translated_63_residues
MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEIHIKVDKDVEELLKSRSDLF
>Mature_63_residues
MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEIHIKVDKDVEELLKSRSDLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787647, Length=61, Percent_Identity=73.7704918032787, Blast_Score=96, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7051; Mature: 7051

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEIHIKVDKDVEELLKSRS
CCCHHHHHHHHHHHHEECCCCCEEEECCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHC
DLF
CCC
>Mature Secondary Structure
MKMSIAMLSALASFIVVGCTPRIEVAAPEQPITINMNVKIEHEIHIKVDKDVEELLKSRS
CCCHHHHHHHHHHHHEECCCCCEEEECCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHC
DLF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]